RNA–Protein interactions for RNA: ENST00000507836.1

CAST-219, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 449 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-219ENST00000507836 ATMINO43313 823 aaPredicted RBP13.56□□□□□ -0.24
CAST-219ENST00000507836 SLC39A7Q92504 469 aa13.53□□□□□ -0.24
CAST-219ENST00000507836 TSPYL2Q9H2G4 693 aaPredicted RBP13.53□□□□□ -0.24
CAST-219ENST00000507836 C7P10643 843 aa13.51□□□□□ -0.25
CAST-219ENST00000507836 POTEGQ6S5H5 508 aa13.5□□□□□ -0.25
CAST-219ENST00000507836 POTEJP0CG39 1038 aa13.49□□□□□ -0.25
CAST-219ENST00000507836 PROM2Q8N271 834 aa13.48□□□□□ -0.25
CAST-219ENST00000507836 CCDC61Q9Y6R9 512 aa13.47□□□□□ -0.25
CAST-219ENST00000507836 ATN1P54259 1190 aaPredicted RBP13.43□□□□□ -0.26
CAST-219ENST00000507836 MAMSTRQ6ZN01 415 aa13.4□□□□□ -0.26
CAST-219ENST00000507836 KIF12Q96FN5 646 aa13.4□□□□□ -0.26
CAST-219ENST00000507836 TRPC6Q9Y210 931 aa13.37□□□□□ -0.27
CAST-219ENST00000507836 BMP2KQ9NSY1 1161 aaPredicted RBP13.36□□□□□ -0.27
CAST-219ENST00000507836 SCUBE2Q9NQ36 999 aa13.34□□□□□ -0.27
CAST-219ENST00000507836 POTEFA5A3E0 1075 aa13.32□□□□□ -0.28
CAST-219ENST00000507836 MAP3K13O43283 966 aa13.32□□□□□ -0.28
CAST-219ENST00000507836 LCE2DQ5TA82 110 aaPredicted RBP13.31□□□□□ -0.28
CAST-219ENST00000507836 PLEKHG5O94827 1062 aa13.3□□□□□ -0.28
CAST-219ENST00000507836 RASEFQ8IZ41 740 aa13.3□□□□□ -0.28
CAST-219ENST00000507836 MIER1Q8N108 512 aa13.3□□□□□ -0.28
CAST-219ENST00000507836 PCDH10Q9P2E7 1040 aa13.3□□□□□ -0.28
CAST-219ENST00000507836 FAM163AQ96GL9 167 aaPredicted RBP13.29□□□□□ -0.28
CAST-219ENST00000507836 TIE1P35590 1138 aa13.28□□□□□ -0.28
CAST-219ENST00000507836 TTLL13PA6NNM8 815 aa13.21□□□□□ -0.29
CAST-219ENST00000507836 COLQQ9Y215 455 aaPredicted RBP13.2□□□□□ -0.3
CAST-219ENST00000507836 SEC24BO95487 1268 aa13.17□□□□□ -0.3
CAST-219ENST00000507836 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
CAST-219ENST00000507836 TRIM35Q9UPQ4 493 aa13.14□□□□□ -0.31
CAST-219ENST00000507836 PCDHB13Q9Y5F0 798 aa13.13□□□□□ -0.31
CAST-219ENST00000507836 SGIP1Q9BQI5 828 aa13.11□□□□□ -0.31
CAST-219ENST00000507836 IER5LQ5T953 404 aa13.09□□□□□ -0.31
CAST-219ENST00000507836 NUBP1P53384 320 aa13.08□□□□□ -0.32
CAST-219ENST00000507836 IFNL1Q8IU54 200 aa13.05□□□□□ -0.32
CAST-219ENST00000507836 ZBTB47Q9UFB7 747 aaPredicted RBP13.05□□□□□ -0.32
CAST-219ENST00000507836 CDAN1Q8IWY9 1227 aa13□□□□□ -0.33
CAST-219ENST00000507836 TMEM106CQ9BVX2 250 aa13□□□□□ -0.33
CAST-219ENST00000507836 SLAIN1Q8ND83 568 aa12.99□□□□□ -0.33
CAST-219ENST00000507836 FAM212AQ96EL1 285 aa12.99□□□□□ -0.33
CAST-219ENST00000507836 PLCG2P16885 1265 aa12.95□□□□□ -0.34
CAST-219ENST00000507836 ST18O60284 1047 aa12.93□□□□□ -0.34
CAST-219ENST00000507836 IRX5P78411 483 aaPredicted RBP12.91□□□□□ -0.34
CAST-219ENST00000507836 PYGBP11216 843 aa12.85□□□□□ -0.35
CAST-219ENST00000507836 FKBP8Q14318 412 aa12.84□□□□□ -0.35
CAST-219ENST00000507836 DCAF8Q5TAQ9 597 aa12.83□□□□□ -0.36
CAST-219ENST00000507836 OCEL1Q9H607 264 aa12.83□□□□□ -0.36
CAST-219ENST00000507836 PCDHB8Q9UN66 801 aa12.79□□□□□ -0.36
CAST-219ENST00000507836 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.76□□□□□ -0.37
CAST-219ENST00000507836 TMEM121BQ9BXQ6 578 aaPredicted RBP12.75□□□□□ -0.37
CAST-219ENST00000507836 SNPHO15079 494 aa12.72□□□□□ -0.37
CAST-219ENST00000507836 MARVELD3Q96A59 401 aa12.7□□□□□ -0.38
CAST-219ENST00000507836 MMRN1Q13201 1228 aa12.69□□□□□ -0.38
CAST-219ENST00000507836 SPNS2Q8IVW8 549 aa12.68□□□□□ -0.38
CAST-219ENST00000507836 PDCD7Q8N8D1 485 aaKnown RBP12.67□□□□□ -0.38
CAST-219ENST00000507836 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
CAST-219ENST00000507836 C3orf67Q6ZVT6 689 aa12.63□□□□□ -0.39
CAST-219ENST00000507836 ZNF467Q7Z7K2 595 aaPredicted RBP12.63□□□□□ -0.39
CAST-219ENST00000507836 GOLGA2Q08379 1002 aa12.62□□□□□ -0.39
CAST-219ENST00000507836 MKRN3Q13064 507 aaKnown RBP12.62□□□□□ -0.39
CAST-219ENST00000507836 GSE1Q14687 1217 aa12.6□□□□□ -0.39
CAST-219ENST00000507836 L3MBTL3Q96JM7 780 aaPredicted RBP12.59□□□□□ -0.39
CAST-219ENST00000507836 KLHL34Q8N239 644 aa12.58□□□□□ -0.4
CAST-219ENST00000507836 EMP3P54852 163 aa12.56□□□□□ -0.4
CAST-219ENST00000507836 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.56□□□□□ -0.4
CAST-219ENST00000507836 PSEN1P49768 467 aa12.54□□□□□ -0.4
CAST-219ENST00000507836 VASPP50552 380 aaPredicted RBP12.54□□□□□ -0.4
CAST-219ENST00000507836 CHRM1P11229 460 aaPredicted RBP12.52□□□□□ -0.41
CAST-219ENST00000507836 POTEB3A0JP26 581 aa12.5□□□□□ -0.41
CAST-219ENST00000507836 POTEBQ6S5H4 581 aa12.5□□□□□ -0.41
CAST-219ENST00000507836 HS3ST6Q96QI5 342 aa12.5□□□□□ -0.41
CAST-219ENST00000507836 FAM205CA6NFA0 338 aa12.48□□□□□ -0.41
CAST-219ENST00000507836 KRTAP3-3Q9BYR6 98 aa12.48□□□□□ -0.41
CAST-219ENST00000507836 KRTAP3-2Q9BYR7 98 aa12.48□□□□□ -0.41
CAST-219ENST00000507836 ILDR1Q86SU0 546 aaPredicted RBP12.46□□□□□ -0.41
CAST-219ENST00000507836 DPY19L2Q6NUT2 758 aa12.45□□□□□ -0.42
CAST-219ENST00000507836 PDAP1Q13442 181 aaKnown RBP12.44□□□□□ -0.42
CAST-219ENST00000507836 CABP2Q9NPB3 220 aa12.41□□□□□ -0.42
CAST-219ENST00000507836 BOLA1Q9Y3E2 137 aa12.38□□□□□ -0.43
CAST-219ENST00000507836 G3V3G9 751 aa12.37□□□□□ -0.43
CAST-219ENST00000507836 HOXB3P14651 431 aaPredicted RBP12.37□□□□□ -0.43
CAST-219ENST00000507836 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
CAST-219ENST00000507836 SPOCK2Q92563 424 aa12.31□□□□□ -0.44
CAST-219ENST00000507836 ZNF710Q8N1W2 664 aa12.3□□□□□ -0.44
CAST-219ENST00000507836 HOXB1P14653 301 aaPredicted RBP12.29□□□□□ -0.44
CAST-219ENST00000507836 IFNLR1Q8IU57 520 aaPredicted RBP12.29□□□□□ -0.44
CAST-219ENST00000507836 DOK7Q18PE1 504 aa12.26□□□□□ -0.45
CAST-219ENST00000507836 ERBB3P21860 1342 aa12.25□□□□□ -0.45
CAST-219ENST00000507836 EFCAB3Q8N7B9 438 aa12.21□□□□□ -0.45
CAST-219ENST00000507836 RIMBP2O15034 1052 aa12.18□□□□□ -0.46
CAST-219ENST00000507836 VARS2Q5ST30 1063 aaKnown RBP12.18□□□□□ -0.46
CAST-219ENST00000507836 RNF166Q96A37 237 aaPredicted RBP12.16□□□□□ -0.46
CAST-219ENST00000507836 TMEM92Q6UXU6 159 aa12.15□□□□□ -0.46
CAST-219ENST00000507836 MICALL2Q8IY33 904 aa12.14□□□□□ -0.47
CAST-219ENST00000507836 TRIM41Q8WV44 630 aa12.1□□□□□ -0.47
CAST-219ENST00000507836 ZSWIM6Q9HCJ5 1215 aa12.09□□□□□ -0.47
CAST-219ENST00000507836 ZNF687Q8N1G0 1237 aa12.08□□□□□ -0.48
CAST-219ENST00000507836 MYT1LQ9UL68 1186 aa12.08□□□□□ -0.48
CAST-219ENST00000507836 GPR153Q6NV75 609 aa12.07□□□□□ -0.48
CAST-219ENST00000507836 MS4A4AQ96JQ5 239 aa12.05□□□□□ -0.48
CAST-219ENST00000507836 SOX12O15370 315 aa12.04□□□□□ -0.48
CAST-219ENST00000507836 PHF8Q9UPP1 1060 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms