RNA–Protein interactions for RNA: ENST00000507815.1

DDX60-203, Transcript of DExD/H-box helicase 60, humanhuman

TSL 2

Gene DDX60, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-203ENST00000507815 METRNQ9UJH8 293 aa13.36□□□□□ -0.27
DDX60-203ENST00000507815 SLC39A7Q92504 469 aa13.35□□□□□ -0.27
DDX60-203ENST00000507815 TSPYL2Q9H2G4 693 aaPredicted RBP13.35□□□□□ -0.27
DDX60-203ENST00000507815 C7P10643 843 aa13.34□□□□□ -0.27
DDX60-203ENST00000507815 CCDC61Q9Y6R9 512 aa13.31□□□□□ -0.28
DDX60-203ENST00000507815 POTEMA6NI47 508 aa13.3□□□□□ -0.28
DDX60-203ENST00000507815 POTEJP0CG39 1038 aa13.26□□□□□ -0.29
DDX60-203ENST00000507815 POTEGQ6S5H5 508 aa13.25□□□□□ -0.29
DDX60-203ENST00000507815 MAMSTRQ6ZN01 415 aa13.24□□□□□ -0.29
DDX60-203ENST00000507815 KIF12Q96FN5 646 aa13.24□□□□□ -0.29
DDX60-203ENST00000507815 ATN1P54259 1190 aaPredicted RBP13.23□□□□□ -0.29
DDX60-203ENST00000507815 PLEKHG5O94827 1062 aa13.21□□□□□ -0.29
DDX60-203ENST00000507815 MIER1Q8N108 512 aa13.18□□□□□ -0.3
DDX60-203ENST00000507815 BMP2KQ9NSY1 1161 aaPredicted RBP13.16□□□□□ -0.3
DDX60-203ENST00000507815 MAP3K13O43283 966 aa13.15□□□□□ -0.3
DDX60-203ENST00000507815 SCUBE2Q9NQ36 999 aa13.15□□□□□ -0.3
DDX60-203ENST00000507815 RASEFQ8IZ41 740 aa13.14□□□□□ -0.31
DDX60-203ENST00000507815 TRPC6Q9Y210 931 aa13.14□□□□□ -0.31
DDX60-203ENST00000507815 PCDH10Q9P2E7 1040 aa13.13□□□□□ -0.31
DDX60-203ENST00000507815 TIE1P35590 1138 aa13.12□□□□□ -0.31
DDX60-203ENST00000507815 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
DDX60-203ENST00000507815 LCE2DQ5TA82 110 aaPredicted RBP13.06□□□□□ -0.32
DDX60-203ENST00000507815 FAM163AQ96GL9 167 aaPredicted RBP13.06□□□□□ -0.32
DDX60-203ENST00000507815 TTLL13PA6NNM8 815 aa13.04□□□□□ -0.32
DDX60-203ENST00000507815 PLCD3Q8N3E9 789 aa13.04□□□□□ -0.32
DDX60-203ENST00000507815 SEC24BO95487 1268 aa13.01□□□□□ -0.33
DDX60-203ENST00000507815 SGIP1Q9BQI5 828 aa13□□□□□ -0.33
DDX60-203ENST00000507815 COLQQ9Y215 455 aaPredicted RBP13□□□□□ -0.33
DDX60-203ENST00000507815 PCDHB13Q9Y5F0 798 aa12.98□□□□□ -0.33
DDX60-203ENST00000507815 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
DDX60-203ENST00000507815 TRIM35Q9UPQ4 493 aa12.96□□□□□ -0.33
DDX60-203ENST00000507815 IER5LQ5T953 404 aa12.95□□□□□ -0.34
DDX60-203ENST00000507815 NUBP1P53384 320 aa12.94□□□□□ -0.34
DDX60-203ENST00000507815 IFNL1Q8IU54 200 aa12.9□□□□□ -0.34
DDX60-203ENST00000507815 FAM212AQ96EL1 285 aa12.87□□□□□ -0.35
DDX60-203ENST00000507815 TMEM106CQ9BVX2 250 aa12.84□□□□□ -0.35
DDX60-203ENST00000507815 SLAIN1Q8ND83 568 aa12.81□□□□□ -0.36
DDX60-203ENST00000507815 PLCG2P16885 1265 aa12.79□□□□□ -0.36
DDX60-203ENST00000507815 CDAN1Q8IWY9 1227 aa12.77□□□□□ -0.37
DDX60-203ENST00000507815 FKBP8Q14318 412 aa12.76□□□□□ -0.37
DDX60-203ENST00000507815 IRX5P78411 483 aaPredicted RBP12.75□□□□□ -0.37
DDX60-203ENST00000507815 ST18O60284 1047 aa12.73□□□□□ -0.37
DDX60-203ENST00000507815 DCAF8Q5TAQ9 597 aa12.72□□□□□ -0.37
DDX60-203ENST00000507815 PYGBP11216 843 aa12.7□□□□□ -0.38
DDX60-203ENST00000507815 OCEL1Q9H607 264 aa12.69□□□□□ -0.38
DDX60-203ENST00000507815 PCDHB8Q9UN66 801 aa12.65□□□□□ -0.38
DDX60-203ENST00000507815 FBXO3Q9UK99 471 aa12.61□□□□□ -0.39
DDX60-203ENST00000507815 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.6□□□□□ -0.39
DDX60-203ENST00000507815 SNPHO15079 494 aa12.59□□□□□ -0.39
DDX60-203ENST00000507815 TMEM121BQ9BXQ6 578 aaPredicted RBP12.59□□□□□ -0.39
DDX60-203ENST00000507815 GSE1Q14687 1217 aa12.52□□□□□ -0.41
DDX60-203ENST00000507815 ZNF467Q7Z7K2 595 aaPredicted RBP12.52□□□□□ -0.41
DDX60-203ENST00000507815 KLHL34Q8N239 644 aa12.51□□□□□ -0.41
DDX60-203ENST00000507815 GOLGA2Q08379 1002 aa12.5□□□□□ -0.41
DDX60-203ENST00000507815 PDCD7Q8N8D1 485 aaKnown RBP12.5□□□□□ -0.41
DDX60-203ENST00000507815 MARVELD3Q96A59 401 aa12.49□□□□□ -0.41
DDX60-203ENST00000507815 MKRN3Q13064 507 aaKnown RBP12.48□□□□□ -0.41
DDX60-203ENST00000507815 C3orf67Q6ZVT6 689 aa12.47□□□□□ -0.41
DDX60-203ENST00000507815 SPNS2Q8IVW8 549 aa12.47□□□□□ -0.41
DDX60-203ENST00000507815 L3MBTL3Q96JM7 780 aaPredicted RBP12.47□□□□□ -0.41
DDX60-203ENST00000507815 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.41
DDX60-203ENST00000507815 MMRN1Q13201 1228 aa12.46□□□□□ -0.41
DDX60-203ENST00000507815 CHRM1P11229 460 aaPredicted RBP12.45□□□□□ -0.42
DDX60-203ENST00000507815 PSEN1P49768 467 aa12.42□□□□□ -0.42
DDX60-203ENST00000507815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.42
DDX60-203ENST00000507815 EMP3P54852 163 aa12.38□□□□□ -0.43
DDX60-203ENST00000507815 PDAP1Q13442 181 aaKnown RBP12.34□□□□□ -0.43
DDX60-203ENST00000507815 ILDR1Q86SU0 546 aaPredicted RBP12.33□□□□□ -0.44
DDX60-203ENST00000507815 HS3ST6Q96QI5 342 aa12.3□□□□□ -0.44
DDX60-203ENST00000507815 DPY19L2Q6NUT2 758 aa12.29□□□□□ -0.44
DDX60-203ENST00000507815 POTEB3A0JP26 581 aa12.28□□□□□ -0.44
DDX60-203ENST00000507815 FAM205CA6NFA0 338 aa12.28□□□□□ -0.44
DDX60-203ENST00000507815 POTEBQ6S5H4 581 aa12.28□□□□□ -0.44
DDX60-203ENST00000507815 CABP2Q9NPB3 220 aa12.27□□□□□ -0.45
DDX60-203ENST00000507815 KRTAP3-3Q9BYR6 98 aa12.26□□□□□ -0.45
DDX60-203ENST00000507815 KRTAP3-2Q9BYR7 98 aa12.26□□□□□ -0.45
DDX60-203ENST00000507815 G3V3G9 751 aa12.25□□□□□ -0.45
DDX60-203ENST00000507815 SPOCK2Q92563 424 aa12.24□□□□□ -0.45
DDX60-203ENST00000507815 CIZ1Q9ULV3 898 aaPredicted RBP12.24□□□□□ -0.45
DDX60-203ENST00000507815 BOLA1Q9Y3E2 137 aa12.24□□□□□ -0.45
DDX60-203ENST00000507815 IFNLR1Q8IU57 520 aaPredicted RBP12.21□□□□□ -0.45
DDX60-203ENST00000507815 HOXB3P14651 431 aaPredicted RBP12.19□□□□□ -0.46
DDX60-203ENST00000507815 ZNF710Q8N1W2 664 aa12.15□□□□□ -0.46
DDX60-203ENST00000507815 HOXB1P14653 301 aaPredicted RBP12.14□□□□□ -0.47
DDX60-203ENST00000507815 DOK7Q18PE1 504 aa12.13□□□□□ -0.47
DDX60-203ENST00000507815 EFCAB3Q8N7B9 438 aa12.09□□□□□ -0.47
DDX60-203ENST00000507815 ERBB3P21860 1342 aa12.09□□□□□ -0.47
DDX60-203ENST00000507815 TRIM41Q8WV44 630 aa12.06□□□□□ -0.48
DDX60-203ENST00000507815 RIMBP2O15034 1052 aa12.05□□□□□ -0.48
DDX60-203ENST00000507815 MICALL2Q8IY33 904 aa12□□□□□ -0.49
DDX60-203ENST00000507815 VARS2Q5ST30 1063 aaKnown RBP11.99□□□□□ -0.49
DDX60-203ENST00000507815 TMEM92Q6UXU6 159 aa11.98□□□□□ -0.49
DDX60-203ENST00000507815 ZSWIM6Q9HCJ5 1215 aa11.98□□□□□ -0.49
DDX60-203ENST00000507815 SOX12O15370 315 aa11.96□□□□□ -0.49
DDX60-203ENST00000507815 RNF166Q96A37 237 aaPredicted RBP11.96□□□□□ -0.49
DDX60-203ENST00000507815 ZNF687Q8N1G0 1237 aa11.93□□□□□ -0.5
DDX60-203ENST00000507815 GPR153Q6NV75 609 aa11.92□□□□□ -0.5
DDX60-203ENST00000507815 RIOK3O14730 519 aaKnown RBP11.91□□□□□ -0.5
DDX60-203ENST00000507815 MS4A4AQ96JQ5 239 aa11.91□□□□□ -0.5
DDX60-203ENST00000507815 MYT1LQ9UL68 1186 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms