RNA–Protein interactions for RNA: ENST00000507620.2

ATR-204, Transcript of ATR serine/threonine kinase, humanhuman

TSL 5

Gene ATR, Length 837 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-204ENST00000507620 CD44P16070 742 aaKnown RBP12.29□□□□□ -0.44
ATR-204ENST00000507620 EVX2Q03828 476 aa12.28□□□□□ -0.44
ATR-204ENST00000507620 PKD2Q13563 968 aa12.28□□□□□ -0.44
ATR-204ENST00000507620 TSPYL2Q9H2G4 693 aaPredicted RBP12.28□□□□□ -0.44
ATR-204ENST00000507620 ECM2O94769 699 aaPredicted RBP12.25□□□□□ -0.45
ATR-204ENST00000507620 ZRANB1Q9UGI0 708 aa12.21□□□□□ -0.45
ATR-204ENST00000507620 CHRM1P11229 460 aaPredicted RBP12.18□□□□□ -0.46
ATR-204ENST00000507620 CCDC61Q9Y6R9 512 aa12.18□□□□□ -0.46
ATR-204ENST00000507620 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
ATR-204ENST00000507620 PYGBP11216 843 aa12.15□□□□□ -0.46
ATR-204ENST00000507620 ZNF579Q8NAF0 562 aaKnown RBP12.11□□□□□ -0.47
ATR-204ENST00000507620 TAOK2Q9UL54 1235 aa12.1□□□□□ -0.47
ATR-204ENST00000507620 DCAF8L2P0C7V8 631 aa12.08□□□□□ -0.48
ATR-204ENST00000507620 PHF12Q96QT6 1004 aa12.08□□□□□ -0.48
ATR-204ENST00000507620 SGIP1Q9BQI5 828 aa12.08□□□□□ -0.48
ATR-204ENST00000507620 RGL2O15211 777 aa12.07□□□□□ -0.48
ATR-204ENST00000507620 CLCN6P51797 869 aa12.07□□□□□ -0.48
ATR-204ENST00000507620 ZNF467Q7Z7K2 595 aaPredicted RBP12.07□□□□□ -0.48
ATR-204ENST00000507620 RIOK3O14730 519 aaKnown RBP12.06□□□□□ -0.48
ATR-204ENST00000507620 KIF12Q96FN5 646 aa12.06□□□□□ -0.48
ATR-204ENST00000507620 PCDHB13Q9Y5F0 798 aa12.04□□□□□ -0.48
ATR-204ENST00000507620 GABBR2O75899 941 aa12.03□□□□□ -0.48
ATR-204ENST00000507620 MAP3K13O43283 966 aa12.02□□□□□ -0.49
ATR-204ENST00000507620 RNF25Q96BH1 459 aaPredicted RBP12□□□□□ -0.49
ATR-204ENST00000507620 VGFO15240 615 aaPredicted RBP11.99□□□□□ -0.49
ATR-204ENST00000507620 IFNL1Q8IU54 200 aa11.96□□□□□ -0.49
ATR-204ENST00000507620 PCDHB8Q9UN66 801 aa11.95□□□□□ -0.5
ATR-204ENST00000507620 PDAP1Q13442 181 aaKnown RBP11.94□□□□□ -0.5
ATR-204ENST00000507620 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
ATR-204ENST00000507620 MS4A3Q96HJ5 214 aa11.92□□□□□ -0.5
ATR-204ENST00000507620 CHGAP10645 457 aaKnown RBP11.89□□□□□ -0.51
ATR-204ENST00000507620 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.88□□□□□ -0.51
ATR-204ENST00000507620 STK25O00506 426 aa11.88□□□□□ -0.51
ATR-204ENST00000507620 PSEN1P49768 467 aa11.88□□□□□ -0.51
ATR-204ENST00000507620 ZFP91Q96JP5 570 aaPredicted RBP11.88□□□□□ -0.51
ATR-204ENST00000507620 HS6ST3Q8IZP7 471 aa11.87□□□□□ -0.51
ATR-204ENST00000507620 DCBLD2Q96PD2 775 aa11.85□□□□□ -0.51
ATR-204ENST00000507620 TIE1P35590 1138 aa11.83□□□□□ -0.52
ATR-204ENST00000507620 BCL11BQ9C0K0 894 aaPredicted RBP11.83□□□□□ -0.52
ATR-204ENST00000507620 STK24Q9Y6E0 443 aa11.83□□□□□ -0.52
ATR-204ENST00000507620 BBXQ8WY36 941 aaPredicted RBP11.8□□□□□ -0.52
ATR-204ENST00000507620 TMEM106CQ9BVX2 250 aa11.8□□□□□ -0.52
ATR-204ENST00000507620 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.79□□□□□ -0.52
ATR-204ENST00000507620 TRPC6Q9Y210 931 aa11.79□□□□□ -0.52
ATR-204ENST00000507620 GOLGA2Q08379 1002 aa11.78□□□□□ -0.52
ATR-204ENST00000507620 DNAJC5Q9H3Z4 198 aa11.77□□□□□ -0.53
ATR-204ENST00000507620 TTLL13PA6NNM8 815 aa11.75□□□□□ -0.53
ATR-204ENST00000507620 POTEIP0CG38 1075 aa11.75□□□□□ -0.53
ATR-204ENST00000507620 BMP2KQ9NSY1 1161 aaPredicted RBP11.74□□□□□ -0.53
ATR-204ENST00000507620 CABP2Q9NPB3 220 aa11.73□□□□□ -0.53
ATR-204ENST00000507620 ASTLQ6HA08 431 aaPredicted RBP11.71□□□□□ -0.53
ATR-204ENST00000507620 RYDENQ9NUL5 291 aaKnown RBP11.7□□□□□ -0.54
ATR-204ENST00000507620 ATMINO43313 823 aaPredicted RBP11.69□□□□□ -0.54
ATR-204ENST00000507620 MKRN3Q13064 507 aaKnown RBP11.69□□□□□ -0.54
ATR-204ENST00000507620 TRIM35Q9UPQ4 493 aa11.68□□□□□ -0.54
ATR-204ENST00000507620 SOX12O15370 315 aa11.67□□□□□ -0.54
ATR-204ENST00000507620 ATN1P54259 1190 aaPredicted RBP11.66□□□□□ -0.54
ATR-204ENST00000507620 EFCAB3Q8N7B9 438 aa11.66□□□□□ -0.54
ATR-204ENST00000507620 PELP1Q8IZL8 1130 aaKnown RBP11.65□□□□□ -0.54
ATR-204ENST00000507620 SPRYD3Q8NCJ5 442 aa11.64□□□□□ -0.55
ATR-204ENST00000507620 NLRP6P59044 892 aa11.62□□□□□ -0.55
ATR-204ENST00000507620 NKX1-1Q15270 411 aaPredicted RBP11.62□□□□□ -0.55
ATR-204ENST00000507620 IER5LQ5T953 404 aa11.62□□□□□ -0.55
ATR-204ENST00000507620 PAXIP1Q6ZW49 1069 aaPredicted RBP11.61□□□□□ -0.55
ATR-204ENST00000507620 PLCB2Q00722 1185 aa11.6□□□□□ -0.55
ATR-204ENST00000507620 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
ATR-204ENST00000507620 SLC39A7Q92504 469 aa11.59□□□□□ -0.55
ATR-204ENST00000507620 MFRPQ9BY79 579 aa11.57□□□□□ -0.56
ATR-204ENST00000507620 C7P10643 843 aa11.56□□□□□ -0.56
ATR-204ENST00000507620 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.56□□□□□ -0.56
ATR-204ENST00000507620 GTPBP6O43824 516 aaPredicted RBP11.55□□□□□ -0.56
ATR-204ENST00000507620 METRNQ9UJH8 293 aa11.55□□□□□ -0.56
ATR-204ENST00000507620 PHF8Q9UPP1 1060 aa11.55□□□□□ -0.56
ATR-204ENST00000507620 SEC24BO95487 1268 aa11.53□□□□□ -0.56
ATR-204ENST00000507620 PLCG2P16885 1265 aa11.52□□□□□ -0.57
ATR-204ENST00000507620 FBXO22Q8NEZ5 403 aa11.52□□□□□ -0.57
ATR-204ENST00000507620 OCEL1Q9H607 264 aa11.52□□□□□ -0.57
ATR-204ENST00000507620 IRX5P78411 483 aaPredicted RBP11.5□□□□□ -0.57
ATR-204ENST00000507620 ILDR1Q86SU0 546 aaPredicted RBP11.5□□□□□ -0.57
ATR-204ENST00000507620 MS4A4AQ96JQ5 239 aa11.45□□□□□ -0.58
ATR-204ENST00000507620 COLQQ9Y215 455 aaPredicted RBP11.45□□□□□ -0.58
ATR-204ENST00000507620 G3V3G9 751 aa11.44□□□□□ -0.58
ATR-204ENST00000507620 HAP1P54257 671 aaPredicted RBP11.44□□□□□ -0.58
ATR-204ENST00000507620 LHX8Q68G74 356 aa11.44□□□□□ -0.58
ATR-204ENST00000507620 PDCD7Q8N8D1 485 aaKnown RBP11.44□□□□□ -0.58
ATR-204ENST00000507620 POTEFA5A3E0 1075 aa11.42□□□□□ -0.58
ATR-204ENST00000507620 L3MBTL3Q96JM7 780 aaPredicted RBP11.42□□□□□ -0.58
ATR-204ENST00000507620 SLC24A1O60721 1099 aa11.41□□□□□ -0.58
ATR-204ENST00000507620 POTEB2H3BUK9 544 aa11.39□□□□□ -0.59
ATR-204ENST00000507620 PPP1R37O75864 691 aa11.39□□□□□ -0.59
ATR-204ENST00000507620 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
ATR-204ENST00000507620 BOLA1Q9Y3E2 137 aa11.36□□□□□ -0.59
ATR-204ENST00000507620 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
ATR-204ENST00000507620 MICALL2Q8IY33 904 aa11.32□□□□□ -0.6
ATR-204ENST00000507620 POTEJP0CG39 1038 aa11.3□□□□□ -0.6
ATR-204ENST00000507620 TMEM121BQ9BXQ6 578 aaPredicted RBP11.3□□□□□ -0.6
ATR-204ENST00000507620 VSIG10Q8N0Z9 540 aa11.29□□□□□ -0.6
ATR-204ENST00000507620 C3orf67Q6ZVT6 689 aa11.28□□□□□ -0.6
ATR-204ENST00000507620 MAMSTRQ6ZN01 415 aa11.25□□□□□ -0.61
ATR-204ENST00000507620 SCUBE2Q9NQ36 999 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms