RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, humanhuman

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-205ENST00000507316 ATXN8OSP0DMR3 200 aa11.87□□□□□ -0.51
TUSC3-205ENST00000507316 ATMINO43313 823 aaPredicted RBP11.85□□□□□ -0.51
TUSC3-205ENST00000507316 PAK3O75914 559 aaPredicted RBP11.85□□□□□ -0.51
TUSC3-205ENST00000507316 CREBZFQ9NS37 354 aa11.8□□□□□ -0.52
TUSC3-205ENST00000507316 SPNS2Q8IVW8 549 aa11.79□□□□□ -0.52
TUSC3-205ENST00000507316 MS4A3Q96HJ5 214 aa11.74□□□□□ -0.53
TUSC3-205ENST00000507316 POTEFA5A3E0 1075 aa11.68□□□□□ -0.54
TUSC3-205ENST00000507316 ATN1P54259 1190 aaPredicted RBP11.68□□□□□ -0.54
TUSC3-205ENST00000507316 ST18O60284 1047 aa11.66□□□□□ -0.54
TUSC3-205ENST00000507316 ZBTB22O15209 634 aa11.63□□□□□ -0.55
TUSC3-205ENST00000507316 NPM1P06748 294 aaKnown RBP eCLIP11.55□□□□□ -0.56
TUSC3-205ENST00000507316 SLAIN1Q8ND83 568 aa11.49□□□□□ -0.57
TUSC3-205ENST00000507316 STAG3Q9UJ98 1225 aa11.49□□□□□ -0.57
TUSC3-205ENST00000507316 COLQQ9Y215 455 aaPredicted RBP11.48□□□□□ -0.57
TUSC3-205ENST00000507316 SEC24BO95487 1268 aa11.47□□□□□ -0.57
TUSC3-205ENST00000507316 BMP2KQ9NSY1 1161 aaPredicted RBP11.45□□□□□ -0.58
TUSC3-205ENST00000507316 MNX1P50219 401 aaPredicted RBP11.42□□□□□ -0.58
TUSC3-205ENST00000507316 TRPC6Q9Y210 931 aa11.4□□□□□ -0.58
TUSC3-205ENST00000507316 TMEM121BQ9BXQ6 578 aaPredicted RBP11.38□□□□□ -0.59
TUSC3-205ENST00000507316 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
TUSC3-205ENST00000507316 TSPYL2Q9H2G4 693 aaPredicted RBP11.35□□□□□ -0.59
TUSC3-205ENST00000507316 TIE1P35590 1138 aa11.33□□□□□ -0.6
TUSC3-205ENST00000507316 KIF12Q96FN5 646 aa11.31□□□□□ -0.6
TUSC3-205ENST00000507316 CCDC61Q9Y6R9 512 aa11.3□□□□□ -0.6
TUSC3-205ENST00000507316 TTLL13PA6NNM8 815 aa11.25□□□□□ -0.61
TUSC3-205ENST00000507316 EHMT2Q96KQ7 1210 aa11.25□□□□□ -0.61
TUSC3-205ENST00000507316 KRTAP3-3Q9BYR6 98 aa11.24□□□□□ -0.61
TUSC3-205ENST00000507316 KRTAP3-2Q9BYR7 98 aa11.24□□□□□ -0.61
TUSC3-205ENST00000507316 SNPHO15079 494 aa11.22□□□□□ -0.61
TUSC3-205ENST00000507316 IER5LQ5T953 404 aa11.22□□□□□ -0.61
TUSC3-205ENST00000507316 MAP3K13O43283 966 aa11.21□□□□□ -0.61
TUSC3-205ENST00000507316 TRIM35Q9UPQ4 493 aa11.2□□□□□ -0.62
TUSC3-205ENST00000507316 EMP3P54852 163 aa11.15□□□□□ -0.62
TUSC3-205ENST00000507316 CSRNP3Q8WYN3 585 aa11.15□□□□□ -0.62
TUSC3-205ENST00000507316 POTEB3A0JP26 581 aa11.13□□□□□ -0.63
TUSC3-205ENST00000507316 POTEBQ6S5H4 581 aa11.13□□□□□ -0.63
TUSC3-205ENST00000507316 HS3ST6Q96QI5 342 aa11.12□□□□□ -0.63
TUSC3-205ENST00000507316 FAM205CA6NFA0 338 aa11.09□□□□□ -0.63
TUSC3-205ENST00000507316 PLCG2P16885 1265 aa11.09□□□□□ -0.63
TUSC3-205ENST00000507316 RNF166Q96A37 237 aaPredicted RBP11.04□□□□□ -0.64
TUSC3-205ENST00000507316 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.04□□□□□ -0.64
TUSC3-205ENST00000507316 IRX5P78411 483 aaPredicted RBP10.97□□□□□ -0.65
TUSC3-205ENST00000507316 SPDYE4A6NLX3 237 aa10.94□□□□□ -0.66
TUSC3-205ENST00000507316 PCDHB13Q9Y5F0 798 aa10.94□□□□□ -0.66
TUSC3-205ENST00000507316 TMEM106CQ9BVX2 250 aa10.91□□□□□ -0.66
TUSC3-205ENST00000507316 SGIP1Q9BQI5 828 aa10.9□□□□□ -0.66
TUSC3-205ENST00000507316 RASEFQ8IZ41 740 aa10.89□□□□□ -0.67
TUSC3-205ENST00000507316 OCEL1Q9H607 264 aa10.89□□□□□ -0.67
TUSC3-205ENST00000507316 MYT1LQ9UL68 1186 aa10.88□□□□□ -0.67
TUSC3-205ENST00000507316 IFNL1Q8IU54 200 aa10.83□□□□□ -0.68
TUSC3-205ENST00000507316 C3orf67Q6ZVT6 689 aa10.78□□□□□ -0.68
TUSC3-205ENST00000507316 ERBB3P21860 1342 aa10.71□□□□□ -0.69
TUSC3-205ENST00000507316 PLEKHG5O94827 1062 aa10.66□□□□□ -0.7
TUSC3-205ENST00000507316 HOXB1P14653 301 aaPredicted RBP10.63□□□□□ -0.71
TUSC3-205ENST00000507316 L3MBTL3Q96JM7 780 aaPredicted RBP10.63□□□□□ -0.71
TUSC3-205ENST00000507316 MIER1Q8N108 512 aa10.62□□□□□ -0.71
TUSC3-205ENST00000507316 PDCD7Q8N8D1 485 aaKnown RBP10.62□□□□□ -0.71
TUSC3-205ENST00000507316 PLA2G2EQ9NZK7 142 aa10.62□□□□□ -0.71
TUSC3-205ENST00000507316 HOXB3P14651 431 aaPredicted RBP10.6□□□□□ -0.71
TUSC3-205ENST00000507316 PTGER2P43116 358 aa10.59□□□□□ -0.71
TUSC3-205ENST00000507316 VARS2Q5ST30 1063 aaKnown RBP10.59□□□□□ -0.71
TUSC3-205ENST00000507316 ZNF710Q8N1W2 664 aa10.59□□□□□ -0.71
TUSC3-205ENST00000507316 ZNF687Q8N1G0 1237 aa10.52□□□□□ -0.73
TUSC3-205ENST00000507316 NUBP1P53384 320 aa10.49□□□□□ -0.73
TUSC3-205ENST00000507316 ANKRD13DQ6ZTN6 518 aa10.49□□□□□ -0.73
TUSC3-205ENST00000507316 DOK7Q18PE1 504 aa10.46□□□□□ -0.73
TUSC3-205ENST00000507316 MKRN3Q13064 507 aaKnown RBP10.44□□□□□ -0.74
TUSC3-205ENST00000507316 FAM212AQ96EL1 285 aa10.44□□□□□ -0.74
TUSC3-205ENST00000507316 PCDHB8Q9UN66 801 aa10.44□□□□□ -0.74
TUSC3-205ENST00000507316 GOLGA2Q08379 1002 aa10.43□□□□□ -0.74
TUSC3-205ENST00000507316 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.43□□□□□ -0.74
TUSC3-205ENST00000507316 PROM2Q8N271 834 aa10.42□□□□□ -0.74
TUSC3-205ENST00000507316 RIMBP2O15034 1052 aa10.38□□□□□ -0.75
TUSC3-205ENST00000507316 PYGBP11216 843 aa10.38□□□□□ -0.75
TUSC3-205ENST00000507316 PLCD3Q8N3E9 789 aa10.37□□□□□ -0.75
TUSC3-205ENST00000507316 HCSTQ9UBK5 93 aa10.36□□□□□ -0.75
TUSC3-205ENST00000507316 DPY19L2Q6NUT2 758 aa10.35□□□□□ -0.75
TUSC3-205ENST00000507316 IRX2Q9BZI1 471 aaPredicted RBP10.34□□□□□ -0.75
TUSC3-205ENST00000507316 G3V3G9 751 aa10.33□□□□□ -0.76
TUSC3-205ENST00000507316 DCAF8Q5TAQ9 597 aa10.33□□□□□ -0.76
TUSC3-205ENST00000507316 ZBTB47Q9UFB7 747 aaPredicted RBP10.32□□□□□ -0.76
TUSC3-205ENST00000507316 LSM11P83369 360 aaKnown RBP eCLIP10.3□□□□□ -0.76
TUSC3-205ENST00000507316 BOLA1Q9Y3E2 137 aa10.29□□□□□ -0.76
TUSC3-205ENST00000507316 ZSWIM6Q9HCJ5 1215 aa10.25□□□□□ -0.77
TUSC3-205ENST00000507316 GPR153Q6NV75 609 aa10.24□□□□□ -0.77
TUSC3-205ENST00000507316 ILDR1Q86SU0 546 aaPredicted RBP10.24□□□□□ -0.77
TUSC3-205ENST00000507316 FKBP8Q14318 412 aa10.18□□□□□ -0.78
TUSC3-205ENST00000507316 RGS20O76081 388 aa10.17□□□□□ -0.78
TUSC3-205ENST00000507316 ZNF467Q7Z7K2 595 aaPredicted RBP10.15□□□□□ -0.78
TUSC3-205ENST00000507316 ZNF316A6NFI3 1004 aaPredicted RBP10.13□□□□□ -0.79
TUSC3-205ENST00000507316 ARSIQ5FYB1 569 aa10.13□□□□□ -0.79
TUSC3-205ENST00000507316 PSEN1P49768 467 aa10.12□□□□□ -0.79
TUSC3-205ENST00000507316 Q6ZNB5 142 aa10.08□□□□□ -0.8
TUSC3-205ENST00000507316 AXIN2Q9Y2T1 843 aa10.08□□□□□ -0.8
TUSC3-205ENST00000507316 KHSRPQ92945 711 aaKnown RBP eCLIP10.07□□□□□ -0.85e-7■□□□□ 9.1
TUSC3-205ENST00000507316 PBX2P40425 430 aa10.05□□□□□ -0.8
TUSC3-205ENST00000507316 POTEEQ6S8J3 1075 aa10.05□□□□□ -0.8
TUSC3-205ENST00000507316 TMEM92Q6UXU6 159 aa10.05□□□□□ -0.8
TUSC3-205ENST00000507316 CABP2Q9NPB3 220 aa10.03□□□□□ -0.8
TUSC3-205ENST00000507316 ADGRD1Q6QNK2 874 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms