RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 TSPYL2Q9H2G4 693 aaPredicted RBP10.07□□□□□ -0.8
CDC42SE2-210ENST00000506929 GABBR2O75899 941 aa10.04□□□□□ -0.8
CDC42SE2-210ENST00000506929 FAM212AQ96EL1 285 aa10.03□□□□□ -0.8
CDC42SE2-210ENST00000506929 PKD2Q13563 968 aa10.01□□□□□ -0.81
CDC42SE2-210ENST00000506929 PHF12Q96QT6 1004 aa10.01□□□□□ -0.81
CDC42SE2-210ENST00000506929 CCDC61Q9Y6R9 512 aa10.01□□□□□ -0.81
CDC42SE2-210ENST00000506929 DCAF8Q5TAQ9 597 aa10□□□□□ -0.81
CDC42SE2-210ENST00000506929 CIZ1Q9ULV3 898 aaPredicted RBP10□□□□□ -0.81
CDC42SE2-210ENST00000506929 GSE1Q14687 1217 aa9.94□□□□□ -0.82
CDC42SE2-210ENST00000506929 KIF12Q96FN5 646 aa9.93□□□□□ -0.82
CDC42SE2-210ENST00000506929 PYGBP11216 843 aa9.92□□□□□ -0.82
CDC42SE2-210ENST00000506929 AMER1Q5JTC6 1135 aaPredicted RBP9.92□□□□□ -0.82
CDC42SE2-210ENST00000506929 GALR2O43603 387 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE2-210ENST00000506929 MS4A3Q96HJ5 214 aa9.89□□□□□ -0.83
CDC42SE2-210ENST00000506929 MAP3K13O43283 966 aa9.88□□□□□ -0.83
CDC42SE2-210ENST00000506929 ECM2O94769 699 aaPredicted RBP9.88□□□□□ -0.83
CDC42SE2-210ENST00000506929 DCBLD2Q96PD2 775 aa9.87□□□□□ -0.83
CDC42SE2-210ENST00000506929 SGIP1Q9BQI5 828 aa9.87□□□□□ -0.83
CDC42SE2-210ENST00000506929 RGL2O15211 777 aa9.86□□□□□ -0.83
CDC42SE2-210ENST00000506929 RNF25Q96BH1 459 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE2-210ENST00000506929 PCDHB13Q9Y5F0 798 aa9.85□□□□□ -0.83
CDC42SE2-210ENST00000506929 CHRM1P11229 460 aaPredicted RBP9.83□□□□□ -0.84
CDC42SE2-210ENST00000506929 POTEIP0CG38 1075 aa9.81□□□□□ -0.84
CDC42SE2-210ENST00000506929 PCDHB8Q9UN66 801 aa9.81□□□□□ -0.84
CDC42SE2-210ENST00000506929 TRIM41Q8WV44 630 aa9.8□□□□□ -0.84
CDC42SE2-210ENST00000506929 IFNL1Q8IU54 200 aa9.79□□□□□ -0.84
CDC42SE2-210ENST00000506929 TRPC6Q9Y210 931 aa9.79□□□□□ -0.84
CDC42SE2-210ENST00000506929 TIE1P35590 1138 aa9.76□□□□□ -0.85
CDC42SE2-210ENST00000506929 ASTLQ6HA08 431 aaPredicted RBP9.75□□□□□ -0.85
CDC42SE2-210ENST00000506929 ZNF467Q7Z7K2 595 aaPredicted RBP9.75□□□□□ -0.85
CDC42SE2-210ENST00000506929 ATMINO43313 823 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE2-210ENST00000506929 LHX8Q68G74 356 aa9.74□□□□□ -0.85
CDC42SE2-210ENST00000506929 BMP2KQ9NSY1 1161 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE2-210ENST00000506929 DCAF8L2P0C7V8 631 aa9.71□□□□□ -0.86
CDC42SE2-210ENST00000506929 TTLL13PA6NNM8 815 aa9.7□□□□□ -0.86
CDC42SE2-210ENST00000506929 RIOK3O14730 519 aaKnown RBP9.7□□□□□ -0.86
CDC42SE2-210ENST00000506929 ATN1P54259 1190 aaPredicted RBP9.69□□□□□ -0.86
CDC42SE2-210ENST00000506929 PELP1Q8IZL8 1130 aaKnown RBP9.69□□□□□ -0.86
CDC42SE2-210ENST00000506929 TMEM106CQ9BVX2 250 aa9.68□□□□□ -0.86
CDC42SE2-210ENST00000506929 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE2-210ENST00000506929 ZFP91Q96JP5 570 aaPredicted RBP9.66□□□□□ -0.86
CDC42SE2-210ENST00000506929 C7P10643 843 aa9.65□□□□□ -0.86
CDC42SE2-210ENST00000506929 PDAP1Q13442 181 aaKnown RBP9.65□□□□□ -0.86
CDC42SE2-210ENST00000506929 SLC39A7Q92504 469 aa9.65□□□□□ -0.86
CDC42SE2-210ENST00000506929 PSEN1P49768 467 aa9.64□□□□□ -0.87
CDC42SE2-210ENST00000506929 TRIM35Q9UPQ4 493 aa9.63□□□□□ -0.87
CDC42SE2-210ENST00000506929 METRNQ9UJH8 293 aa9.62□□□□□ -0.87
CDC42SE2-210ENST00000506929 VGFO15240 615 aaPredicted RBP9.61□□□□□ -0.87
CDC42SE2-210ENST00000506929 CHGAP10645 457 aaKnown RBP9.61□□□□□ -0.87
CDC42SE2-210ENST00000506929 IER5LQ5T953 404 aa9.6□□□□□ -0.87
CDC42SE2-210ENST00000506929 BCL11BQ9C0K0 894 aaPredicted RBP9.59□□□□□ -0.87
CDC42SE2-210ENST00000506929 STK25O00506 426 aa9.58□□□□□ -0.88
CDC42SE2-210ENST00000506929 TAOK2Q9UL54 1235 aa9.58□□□□□ -0.88
CDC42SE2-210ENST00000506929 STK24Q9Y6E0 443 aa9.57□□□□□ -0.88
CDC42SE2-210ENST00000506929 GOLGA2Q08379 1002 aa9.56□□□□□ -0.88
CDC42SE2-210ENST00000506929 SEC24BO95487 1268 aa9.55□□□□□ -0.88
CDC42SE2-210ENST00000506929 HS6ST3Q8IZP7 471 aa9.54□□□□□ -0.88
CDC42SE2-210ENST00000506929 CABP2Q9NPB3 220 aa9.54□□□□□ -0.88
CDC42SE2-210ENST00000506929 NKX1-1Q15270 411 aaPredicted RBP9.53□□□□□ -0.88
CDC42SE2-210ENST00000506929 MKRN3Q13064 507 aaKnown RBP9.52□□□□□ -0.89
CDC42SE2-210ENST00000506929 EFCAB3Q8N7B9 438 aa9.51□□□□□ -0.89
CDC42SE2-210ENST00000506929 COLQQ9Y215 455 aaPredicted RBP9.51□□□□□ -0.89
CDC42SE2-210ENST00000506929 POTEFA5A3E0 1075 aa9.5□□□□□ -0.89
CDC42SE2-210ENST00000506929 IRX5P78411 483 aaPredicted RBP9.5□□□□□ -0.89
CDC42SE2-210ENST00000506929 POTEB2H3BUK9 544 aa9.49□□□□□ -0.89
CDC42SE2-210ENST00000506929 PLCG2P16885 1265 aa9.49□□□□□ -0.89
CDC42SE2-210ENST00000506929 OCEL1Q9H607 264 aa9.49□□□□□ -0.89
CDC42SE2-210ENST00000506929 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.45□□□□□ -0.9
CDC42SE2-210ENST00000506929 MAMSTRQ6ZN01 415 aa9.44□□□□□ -0.9
CDC42SE2-210ENST00000506929 PHF8Q9UPP1 1060 aa9.44□□□□□ -0.9
CDC42SE2-210ENST00000506929 BBXQ8WY36 941 aaPredicted RBP9.43□□□□□ -0.9
CDC42SE2-210ENST00000506929 MFRPQ9BY79 579 aa9.43□□□□□ -0.9
CDC42SE2-210ENST00000506929 POTEJP0CG39 1038 aa9.42□□□□□ -0.9
CDC42SE2-210ENST00000506929 ILDR1Q86SU0 546 aaPredicted RBP9.42□□□□□ -0.9
CDC42SE2-210ENST00000506929 PDCD7Q8N8D1 485 aaKnown RBP9.42□□□□□ -0.9
CDC42SE2-210ENST00000506929 MS4A4AQ96JQ5 239 aa9.41□□□□□ -0.9
CDC42SE2-210ENST00000506929 DNAJC5Q9H3Z4 198 aa9.41□□□□□ -0.9
CDC42SE2-210ENST00000506929 SOX12O15370 315 aa9.4□□□□□ -0.9
CDC42SE2-210ENST00000506929 DPY19L2Q6NUT2 758 aa9.4□□□□□ -0.9
CDC42SE2-210ENST00000506929 OTUD5Q96G74 571 aa9.4□□□□□ -0.9
CDC42SE2-210ENST00000506929 GTPBP6O43824 516 aaPredicted RBP9.39□□□□□ -0.91
CDC42SE2-210ENST00000506929 FBXO22Q8NEZ5 403 aa9.39□□□□□ -0.91
CDC42SE2-210ENST00000506929 SCUBE2Q9NQ36 999 aa9.39□□□□□ -0.91
CDC42SE2-210ENST00000506929 PPP1R37O75864 691 aa9.38□□□□□ -0.91
CDC42SE2-210ENST00000506929 PAXIP1Q6ZW49 1069 aaPredicted RBP9.38□□□□□ -0.91
CDC42SE2-210ENST00000506929 L3MBTL3Q96JM7 780 aaPredicted RBP9.37□□□□□ -0.91
CDC42SE2-210ENST00000506929 CFAP44Q96MT7 982 aa9.37□□□□□ -0.91
CDC42SE2-210ENST00000506929 NLRP6P59044 892 aa9.33□□□□□ -0.92
CDC42SE2-210ENST00000506929 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE2-210ENST00000506929 G3V3G9 751 aa9.3□□□□□ -0.92
CDC42SE2-210ENST00000506929 SPRYD3Q8NCJ5 442 aa9.3□□□□□ -0.92
CDC42SE2-210ENST00000506929 PLCB2Q00722 1185 aa9.29□□□□□ -0.92
CDC42SE2-210ENST00000506929 C3orf67Q6ZVT6 689 aa9.28□□□□□ -0.92
CDC42SE2-210ENST00000506929 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.28□□□□□ -0.92
CDC42SE2-210ENST00000506929 BOLA1Q9Y3E2 137 aa9.28□□□□□ -0.92
CDC42SE2-210ENST00000506929 TSHZ2Q9NRE2 1034 aa9.26□□□□□ -0.93
CDC42SE2-210ENST00000506929 SLAIN1Q8ND83 568 aa9.25□□□□□ -0.93
CDC42SE2-210ENST00000506929 CADPS2Q86UW7 1296 aa9.24□□□□□ -0.93
CDC42SE2-210ENST00000506929 TMEM121BQ9BXQ6 578 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE2-210ENST00000506929 MICALL2Q8IY33 904 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms