RNA–Protein interactions for RNA: ENST00000506881.5

PTPN20-217, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 3

Gene PTPN20, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-217ENST00000506881 EVX2Q03828 476 aa12.11□□□□□ -0.47
PTPN20-217ENST00000506881 RTN4Q9NQC3 1192 aaKnown RBP12.08□□□□□ -0.48
PTPN20-217ENST00000506881 AMER1Q5JTC6 1135 aaPredicted RBP12.07□□□□□ -0.48
PTPN20-217ENST00000506881 PYGBP11216 843 aa12.04□□□□□ -0.48
PTPN20-217ENST00000506881 PKD2Q13563 968 aa12.04□□□□□ -0.48
PTPN20-217ENST00000506881 CCDC61Q9Y6R9 512 aa12.03□□□□□ -0.48
PTPN20-217ENST00000506881 PHF12Q96QT6 1004 aa12.02□□□□□ -0.49
PTPN20-217ENST00000506881 ECM2O94769 699 aaPredicted RBP12.01□□□□□ -0.49
PTPN20-217ENST00000506881 ZNF579Q8NAF0 562 aaKnown RBP11.97□□□□□ -0.49
PTPN20-217ENST00000506881 TRIM41Q8WV44 630 aa11.95□□□□□ -0.5
PTPN20-217ENST00000506881 KIF12Q96FN5 646 aa11.94□□□□□ -0.5
PTPN20-217ENST00000506881 MAP3K13O43283 966 aa11.93□□□□□ -0.5
PTPN20-217ENST00000506881 CHRM1P11229 460 aaPredicted RBP11.92□□□□□ -0.5
PTPN20-217ENST00000506881 PCDHB13Q9Y5F0 798 aa11.9□□□□□ -0.5
PTPN20-217ENST00000506881 RGL2O15211 777 aa11.87□□□□□ -0.51
PTPN20-217ENST00000506881 SP7Q8TDD2 431 aaPredicted RBP11.87□□□□□ -0.51
PTPN20-217ENST00000506881 PCDHB8Q9UN66 801 aa11.87□□□□□ -0.51
PTPN20-217ENST00000506881 GABBR2O75899 941 aa11.85□□□□□ -0.51
PTPN20-217ENST00000506881 DCAF8L2P0C7V8 631 aa11.85□□□□□ -0.51
PTPN20-217ENST00000506881 MS4A3Q96HJ5 214 aa11.85□□□□□ -0.51
PTPN20-217ENST00000506881 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
PTPN20-217ENST00000506881 GALR2O43603 387 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-217ENST00000506881 RNF25Q96BH1 459 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-217ENST00000506881 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
PTPN20-217ENST00000506881 RIOK3O14730 519 aaKnown RBP11.81□□□□□ -0.52
PTPN20-217ENST00000506881 CLCN6P51797 869 aa11.81□□□□□ -0.52
PTPN20-217ENST00000506881 ZNF467Q7Z7K2 595 aaPredicted RBP11.81□□□□□ -0.52
PTPN20-217ENST00000506881 TRPC6Q9Y210 931 aa11.77□□□□□ -0.53
PTPN20-217ENST00000506881 VGFO15240 615 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-217ENST00000506881 PSEN1P49768 467 aa11.72□□□□□ -0.53
PTPN20-217ENST00000506881 PDAP1Q13442 181 aaKnown RBP11.72□□□□□ -0.53
PTPN20-217ENST00000506881 TAOK2Q9UL54 1235 aa11.71□□□□□ -0.53
PTPN20-217ENST00000506881 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.7□□□□□ -0.54
PTPN20-217ENST00000506881 ZFP91Q96JP5 570 aaPredicted RBP11.7□□□□□ -0.54
PTPN20-217ENST00000506881 DCBLD2Q96PD2 775 aa11.7□□□□□ -0.54
PTPN20-217ENST00000506881 TMEM106CQ9BVX2 250 aa11.69□□□□□ -0.54
PTPN20-217ENST00000506881 CHGAP10645 457 aaKnown RBP11.67□□□□□ -0.54
PTPN20-217ENST00000506881 STK25O00506 426 aa11.66□□□□□ -0.54
PTPN20-217ENST00000506881 TIE1P35590 1138 aa11.66□□□□□ -0.54
PTPN20-217ENST00000506881 BMP2KQ9NSY1 1161 aaPredicted RBP11.66□□□□□ -0.54
PTPN20-217ENST00000506881 TTLL13PA6NNM8 815 aa11.64□□□□□ -0.55
PTPN20-217ENST00000506881 STK24Q9Y6E0 443 aa11.64□□□□□ -0.55
PTPN20-217ENST00000506881 BCL11BQ9C0K0 894 aaPredicted RBP11.63□□□□□ -0.55
PTPN20-217ENST00000506881 ATMINO43313 823 aaPredicted RBP11.61□□□□□ -0.55
PTPN20-217ENST00000506881 ATN1P54259 1190 aaPredicted RBP11.61□□□□□ -0.55
PTPN20-217ENST00000506881 CABP2Q9NPB3 220 aa11.6□□□□□ -0.55
PTPN20-217ENST00000506881 POTEIP0CG38 1075 aa11.59□□□□□ -0.55
PTPN20-217ENST00000506881 ASTLQ6HA08 431 aaPredicted RBP11.59□□□□□ -0.55
PTPN20-217ENST00000506881 GOLGA2Q08379 1002 aa11.58□□□□□ -0.56
PTPN20-217ENST00000506881 TRIM35Q9UPQ4 493 aa11.58□□□□□ -0.56
PTPN20-217ENST00000506881 HS6ST3Q8IZP7 471 aa11.57□□□□□ -0.56
PTPN20-217ENST00000506881 PELP1Q8IZL8 1130 aaKnown RBP11.55□□□□□ -0.56
PTPN20-217ENST00000506881 MKRN3Q13064 507 aaKnown RBP11.53□□□□□ -0.56
PTPN20-217ENST00000506881 EFCAB3Q8N7B9 438 aa11.53□□□□□ -0.56
PTPN20-217ENST00000506881 BBXQ8WY36 941 aaPredicted RBP11.46□□□□□ -0.57
PTPN20-217ENST00000506881 SLC39A7Q92504 469 aa11.45□□□□□ -0.58
PTPN20-217ENST00000506881 NKX1-1Q15270 411 aaPredicted RBP11.44□□□□□ -0.58
PTPN20-217ENST00000506881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.44□□□□□ -0.58
PTPN20-217ENST00000506881 SOX12O15370 315 aa11.43□□□□□ -0.58
PTPN20-217ENST00000506881 SEC24BO95487 1268 aa11.43□□□□□ -0.58
PTPN20-217ENST00000506881 METRNQ9UJH8 293 aa11.43□□□□□ -0.58
PTPN20-217ENST00000506881 PHF8Q9UPP1 1060 aa11.43□□□□□ -0.58
PTPN20-217ENST00000506881 C7P10643 843 aa11.42□□□□□ -0.58
PTPN20-217ENST00000506881 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.42□□□□□ -0.58
PTPN20-217ENST00000506881 IER5LQ5T953 404 aa11.41□□□□□ -0.58
PTPN20-217ENST00000506881 MFRPQ9BY79 579 aa11.4□□□□□ -0.58
PTPN20-217ENST00000506881 DNAJC5Q9H3Z4 198 aa11.4□□□□□ -0.58
PTPN20-217ENST00000506881 PLCG2P16885 1265 aa11.39□□□□□ -0.59
PTPN20-217ENST00000506881 COLQQ9Y215 455 aaPredicted RBP11.39□□□□□ -0.59
PTPN20-217ENST00000506881 NLRP6P59044 892 aa11.38□□□□□ -0.59
PTPN20-217ENST00000506881 IRX5P78411 483 aaPredicted RBP11.38□□□□□ -0.59
PTPN20-217ENST00000506881 OCEL1Q9H607 264 aa11.38□□□□□ -0.59
PTPN20-217ENST00000506881 PAXIP1Q6ZW49 1069 aaPredicted RBP11.36□□□□□ -0.59
PTPN20-217ENST00000506881 CFAP44Q96MT7 982 aa11.36□□□□□ -0.59
PTPN20-217ENST00000506881 POTEFA5A3E0 1075 aa11.35□□□□□ -0.59
PTPN20-217ENST00000506881 DPY19L2Q6NUT2 758 aa11.34□□□□□ -0.59
PTPN20-217ENST00000506881 FBXO22Q8NEZ5 403 aa11.34□□□□□ -0.59
PTPN20-217ENST00000506881 GTPBP6O43824 516 aaPredicted RBP11.33□□□□□ -0.6
PTPN20-217ENST00000506881 SPRYD3Q8NCJ5 442 aa11.33□□□□□ -0.6
PTPN20-217ENST00000506881 MS4A4AQ96JQ5 239 aa11.33□□□□□ -0.6
PTPN20-217ENST00000506881 PDCD7Q8N8D1 485 aaKnown RBP11.32□□□□□ -0.6
PTPN20-217ENST00000506881 ILDR1Q86SU0 546 aaPredicted RBP11.3□□□□□ -0.6
PTPN20-217ENST00000506881 RYDENQ9NUL5 291 aaKnown RBP11.3□□□□□ -0.6
PTPN20-217ENST00000506881 PPP1R37O75864 691 aa11.29□□□□□ -0.6
PTPN20-217ENST00000506881 G3V3G9 751 aa11.24□□□□□ -0.61
PTPN20-217ENST00000506881 POTEB2H3BUK9 544 aa11.24□□□□□ -0.61
PTPN20-217ENST00000506881 PLCB2Q00722 1185 aa11.23□□□□□ -0.61
PTPN20-217ENST00000506881 L3MBTL3Q96JM7 780 aaPredicted RBP11.23□□□□□ -0.61
PTPN20-217ENST00000506881 BOLA1Q9Y3E2 137 aa11.22□□□□□ -0.61
PTPN20-217ENST00000506881 POTEJP0CG39 1038 aa11.18□□□□□ -0.62
PTPN20-217ENST00000506881 LHX8Q68G74 356 aa11.17□□□□□ -0.62
PTPN20-217ENST00000506881 MICALL2Q8IY33 904 aa11.17□□□□□ -0.62
PTPN20-217ENST00000506881 HAP1P54257 671 aaPredicted RBP11.13□□□□□ -0.63
PTPN20-217ENST00000506881 C3orf67Q6ZVT6 689 aa11.13□□□□□ -0.63
PTPN20-217ENST00000506881 TMEM121BQ9BXQ6 578 aaPredicted RBP11.13□□□□□ -0.63
PTPN20-217ENST00000506881 TSHZ2Q9NRE2 1034 aa11.12□□□□□ -0.63
PTPN20-217ENST00000506881 SCUBE2Q9NQ36 999 aa11.1□□□□□ -0.63
PTPN20-217ENST00000506881 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.1□□□□□ -0.63
PTPN20-217ENST00000506881 MAMSTRQ6ZN01 415 aa11.09□□□□□ -0.63
PTPN20-217ENST00000506881 CADPS2Q86UW7 1296 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms