RNA–Protein interactions for RNA: ENST00000506747.5

CLOCK-205, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 1,337 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-205ENST00000506747 PELP1Q8IZL8 1130 aaKnown RBP12.25□□□□□ -0.45
CLOCK-205ENST00000506747 ASTLQ6HA08 431 aaPredicted RBP12.2□□□□□ -0.46
CLOCK-205ENST00000506747 POTEJP0CG39 1038 aa12.19□□□□□ -0.46
CLOCK-205ENST00000506747 SLC39A7Q92504 469 aa12.17□□□□□ -0.46
CLOCK-205ENST00000506747 MS4A3Q96HJ5 214 aa12.17□□□□□ -0.46
CLOCK-205ENST00000506747 METRNQ9UJH8 293 aa12.17□□□□□ -0.46
CLOCK-205ENST00000506747 ATMINO43313 823 aaPredicted RBP12.16□□□□□ -0.46
CLOCK-205ENST00000506747 C7P10643 843 aa12.16□□□□□ -0.46
CLOCK-205ENST00000506747 MAMSTRQ6ZN01 415 aa12.12□□□□□ -0.47
CLOCK-205ENST00000506747 CDAN1Q8IWY9 1227 aa12.11□□□□□ -0.47
CLOCK-205ENST00000506747 TSPYL2Q9H2G4 693 aaPredicted RBP12.07□□□□□ -0.48
CLOCK-205ENST00000506747 PROM2Q8N271 834 aa12.06□□□□□ -0.48
CLOCK-205ENST00000506747 CCDC61Q9Y6R9 512 aa12.05□□□□□ -0.48
CLOCK-205ENST00000506747 SCUBE2Q9NQ36 999 aa12.04□□□□□ -0.48
CLOCK-205ENST00000506747 ATN1P54259 1190 aaPredicted RBP12.02□□□□□ -0.49
CLOCK-205ENST00000506747 KIF12Q96FN5 646 aa12.01□□□□□ -0.49
CLOCK-205ENST00000506747 BMP2KQ9NSY1 1161 aaPredicted RBP11.94□□□□□ -0.5
CLOCK-205ENST00000506747 PLEKHG5O94827 1062 aa11.93□□□□□ -0.5
CLOCK-205ENST00000506747 TIE1P35590 1138 aa11.92□□□□□ -0.5
CLOCK-205ENST00000506747 FKBP8Q14318 412 aa11.92□□□□□ -0.5
CLOCK-205ENST00000506747 POTEFA5A3E0 1075 aa11.91□□□□□ -0.5
CLOCK-205ENST00000506747 MAP3K13O43283 966 aa11.9□□□□□ -0.5
CLOCK-205ENST00000506747 MMRN1Q13201 1228 aa11.9□□□□□ -0.5
CLOCK-205ENST00000506747 TRPC6Q9Y210 931 aa11.9□□□□□ -0.5
CLOCK-205ENST00000506747 MIER1Q8N108 512 aa11.88□□□□□ -0.51
CLOCK-205ENST00000506747 RASEFQ8IZ41 740 aa11.86□□□□□ -0.51
CLOCK-205ENST00000506747 TTLL13PA6NNM8 815 aa11.83□□□□□ -0.52
CLOCK-205ENST00000506747 SEC24BO95487 1268 aa11.82□□□□□ -0.52
CLOCK-205ENST00000506747 SPNS2Q8IVW8 549 aa11.82□□□□□ -0.52
CLOCK-205ENST00000506747 COLQQ9Y215 455 aaPredicted RBP11.81□□□□□ -0.52
CLOCK-205ENST00000506747 SGIP1Q9BQI5 828 aa11.8□□□□□ -0.52
CLOCK-205ENST00000506747 IER5LQ5T953 404 aa11.78□□□□□ -0.52
CLOCK-205ENST00000506747 TRIM35Q9UPQ4 493 aa11.75□□□□□ -0.53
CLOCK-205ENST00000506747 PCDHB13Q9Y5F0 798 aa11.74□□□□□ -0.53
CLOCK-205ENST00000506747 ST18O60284 1047 aa11.73□□□□□ -0.53
CLOCK-205ENST00000506747 PLCD3Q8N3E9 789 aa11.73□□□□□ -0.53
CLOCK-205ENST00000506747 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.53
CLOCK-205ENST00000506747 NUBP1P53384 320 aa11.68□□□□□ -0.54
CLOCK-205ENST00000506747 IFNL1Q8IU54 200 aa11.65□□□□□ -0.54
CLOCK-205ENST00000506747 SLAIN1Q8ND83 568 aa11.65□□□□□ -0.54
CLOCK-205ENST00000506747 TMEM106CQ9BVX2 250 aa11.63□□□□□ -0.55
CLOCK-205ENST00000506747 FAM212AQ96EL1 285 aa11.61□□□□□ -0.55
CLOCK-205ENST00000506747 FBXO3Q9UK99 471 aa11.61□□□□□ -0.55
CLOCK-205ENST00000506747 PLCG2P16885 1265 aa11.6□□□□□ -0.55
CLOCK-205ENST00000506747 IRX5P78411 483 aaPredicted RBP11.57□□□□□ -0.56
CLOCK-205ENST00000506747 OCEL1Q9H607 264 aa11.52□□□□□ -0.57
CLOCK-205ENST00000506747 TMEM121BQ9BXQ6 578 aaPredicted RBP11.5□□□□□ -0.57
CLOCK-205ENST00000506747 SNPHO15079 494 aa11.48□□□□□ -0.57
CLOCK-205ENST00000506747 MARVELD3Q96A59 401 aa11.48□□□□□ -0.57
CLOCK-205ENST00000506747 DCAF8Q5TAQ9 597 aa11.46□□□□□ -0.57
CLOCK-205ENST00000506747 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.46□□□□□ -0.57
CLOCK-205ENST00000506747 PYGBP11216 843 aa11.44□□□□□ -0.58
CLOCK-205ENST00000506747 VASPP50552 380 aaPredicted RBP11.43□□□□□ -0.58
CLOCK-205ENST00000506747 PCDHB8Q9UN66 801 aa11.39□□□□□ -0.59
CLOCK-205ENST00000506747 KLHL34Q8N239 644 aa11.35□□□□□ -0.59
CLOCK-205ENST00000506747 PDCD7Q8N8D1 485 aaKnown RBP11.33□□□□□ -0.6
CLOCK-205ENST00000506747 KRTAP3-3Q9BYR6 98 aa11.33□□□□□ -0.6
CLOCK-205ENST00000506747 KRTAP3-2Q9BYR7 98 aa11.33□□□□□ -0.6
CLOCK-205ENST00000506747 ZNF467Q7Z7K2 595 aaPredicted RBP11.32□□□□□ -0.6
CLOCK-205ENST00000506747 L3MBTL3Q96JM7 780 aaPredicted RBP11.32□□□□□ -0.6
CLOCK-205ENST00000506747 C3orf67Q6ZVT6 689 aa11.31□□□□□ -0.6
CLOCK-205ENST00000506747 MKRN3Q13064 507 aaKnown RBP11.3□□□□□ -0.6
CLOCK-205ENST00000506747 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
CLOCK-205ENST00000506747 GSE1Q14687 1217 aa11.28□□□□□ -0.6
CLOCK-205ENST00000506747 EMP3P54852 163 aa11.27□□□□□ -0.61
CLOCK-205ENST00000506747 CHRM1P11229 460 aaPredicted RBP11.25□□□□□ -0.61
CLOCK-205ENST00000506747 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.24□□□□□ -0.617e-7■■■■□ 19.5
CLOCK-205ENST00000506747 POTEB3A0JP26 581 aa11.22□□□□□ -0.61
CLOCK-205ENST00000506747 POTEBQ6S5H4 581 aa11.22□□□□□ -0.61
CLOCK-205ENST00000506747 IFNLR1Q8IU57 520 aaPredicted RBP11.22□□□□□ -0.61
CLOCK-205ENST00000506747 HS3ST6Q96QI5 342 aa11.22□□□□□ -0.61
CLOCK-205ENST00000506747 RTN4Q9NQC3 1192 aaKnown RBP11.22□□□□□ -0.61
CLOCK-205ENST00000506747 PSEN1P49768 467 aa11.21□□□□□ -0.61
CLOCK-205ENST00000506747 FAM205CA6NFA0 338 aa11.19□□□□□ -0.62
CLOCK-205ENST00000506747 SPOCK2Q92563 424 aa11.19□□□□□ -0.62
CLOCK-205ENST00000506747 ILDR1Q86SU0 546 aaPredicted RBP11.18□□□□□ -0.62
CLOCK-205ENST00000506747 AMER1Q5JTC6 1135 aaPredicted RBP11.16□□□□□ -0.62
CLOCK-205ENST00000506747 PDAP1Q13442 181 aaKnown RBP11.12□□□□□ -0.63
CLOCK-205ENST00000506747 RNF166Q96A37 237 aaPredicted RBP11.11□□□□□ -0.63
CLOCK-205ENST00000506747 DPY19L2Q6NUT2 758 aa11.1□□□□□ -0.63
CLOCK-205ENST00000506747 G3V3G9 751 aa11.09□□□□□ -0.63
CLOCK-205ENST00000506747 CIZ1Q9ULV3 898 aaPredicted RBP11.09□□□□□ -0.63
CLOCK-205ENST00000506747 BOLA1Q9Y3E2 137 aa11.09□□□□□ -0.63
CLOCK-205ENST00000506747 HOXB3P14651 431 aaPredicted RBP11.07□□□□□ -0.64
CLOCK-205ENST00000506747 CABP2Q9NPB3 220 aa11.06□□□□□ -0.64
CLOCK-205ENST00000506747 HOXB1P14653 301 aaPredicted RBP11.04□□□□□ -0.64
CLOCK-205ENST00000506747 ZNF710Q8N1W2 664 aa11.03□□□□□ -0.64
CLOCK-205ENST00000506747 DOK7Q18PE1 504 aa11.01□□□□□ -0.65
CLOCK-205ENST00000506747 ERBB3P21860 1342 aa10.98□□□□□ -0.65
CLOCK-205ENST00000506747 MYT1LQ9UL68 1186 aa10.96□□□□□ -0.65
CLOCK-205ENST00000506747 RIMBP2O15034 1052 aa10.95□□□□□ -0.66
CLOCK-205ENST00000506747 TRIM41Q8WV44 630 aa10.95□□□□□ -0.66
CLOCK-205ENST00000506747 VARS2Q5ST30 1063 aaKnown RBP10.89□□□□□ -0.67
CLOCK-205ENST00000506747 ZSWIM6Q9HCJ5 1215 aa10.89□□□□□ -0.67
CLOCK-205ENST00000506747 EFCAB3Q8N7B9 438 aa10.88□□□□□ -0.67
CLOCK-205ENST00000506747 ZNF687Q8N1G0 1237 aa10.85□□□□□ -0.67
CLOCK-205ENST00000506747 MICALL2Q8IY33 904 aa10.84□□□□□ -0.67
CLOCK-205ENST00000506747 TMEM92Q6UXU6 159 aa10.83□□□□□ -0.68
CLOCK-205ENST00000506747 GPR153Q6NV75 609 aa10.82□□□□□ -0.68
CLOCK-205ENST00000506747 PTGER2P43116 358 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms