RNA–Protein interactions for RNA: ENST00000506528.5

TNPO1-205, Transcript of transportin 1, humanhuman

TSL 5

Gene TNPO1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-205ENST00000506528 MS4A3Q96HJ5 214 aa13.38□□□□□ -0.27
TNPO1-205ENST00000506528 METRNQ9UJH8 293 aa13.38□□□□□ -0.27
TNPO1-205ENST00000506528 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
TNPO1-205ENST00000506528 C7P10643 843 aa13.32□□□□□ -0.28
TNPO1-205ENST00000506528 LCE2DQ5TA82 110 aaPredicted RBP13.31□□□□□ -0.28
TNPO1-205ENST00000506528 SLC39A7Q92504 469 aa13.31□□□□□ -0.28
TNPO1-205ENST00000506528 PCDH10Q9P2E7 1040 aa13.29□□□□□ -0.28
TNPO1-205ENST00000506528 ATN1P54259 1190 aaPredicted RBP13.22□□□□□ -0.29
TNPO1-205ENST00000506528 MAMSTRQ6ZN01 415 aa13.22□□□□□ -0.29
TNPO1-205ENST00000506528 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
TNPO1-205ENST00000506528 POTEFA5A3E0 1075 aa13.19□□□□□ -0.3
TNPO1-205ENST00000506528 TSPYL2Q9H2G4 693 aaPredicted RBP13.19□□□□□ -0.3
TNPO1-205ENST00000506528 FAM163AQ96GL9 167 aaPredicted RBP13.16□□□□□ -0.3
TNPO1-205ENST00000506528 KIF12Q96FN5 646 aa13.14□□□□□ -0.31
TNPO1-205ENST00000506528 TRPC6Q9Y210 931 aa13.14□□□□□ -0.31
TNPO1-205ENST00000506528 SCUBE2Q9NQ36 999 aa13.13□□□□□ -0.31
TNPO1-205ENST00000506528 BMP2KQ9NSY1 1161 aaPredicted RBP13.12□□□□□ -0.31
TNPO1-205ENST00000506528 PROM2Q8N271 834 aa13.09□□□□□ -0.31
TNPO1-205ENST00000506528 FKBP8Q14318 412 aa13.05□□□□□ -0.32
TNPO1-205ENST00000506528 MAP3K13O43283 966 aa13.03□□□□□ -0.32
TNPO1-205ENST00000506528 TIE1P35590 1138 aa13.02□□□□□ -0.33
TNPO1-205ENST00000506528 COLQQ9Y215 455 aaPredicted RBP13.01□□□□□ -0.33
TNPO1-205ENST00000506528 RASEFQ8IZ41 740 aa12.97□□□□□ -0.33
TNPO1-205ENST00000506528 TTLL13PA6NNM8 815 aa12.96□□□□□ -0.33
TNPO1-205ENST00000506528 CDAN1Q8IWY9 1227 aa12.91□□□□□ -0.34
TNPO1-205ENST00000506528 SEC24BO95487 1268 aa12.9□□□□□ -0.34
TNPO1-205ENST00000506528 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
TNPO1-205ENST00000506528 IER5LQ5T953 404 aa12.84□□□□□ -0.35
TNPO1-205ENST00000506528 MIER1Q8N108 512 aa12.84□□□□□ -0.35
TNPO1-205ENST00000506528 ST18O60284 1047 aa12.81□□□□□ -0.36
TNPO1-205ENST00000506528 SGIP1Q9BQI5 828 aa12.81□□□□□ -0.36
TNPO1-205ENST00000506528 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
TNPO1-205ENST00000506528 PCDHB13Q9Y5F0 798 aa12.79□□□□□ -0.36
TNPO1-205ENST00000506528 SLAIN1Q8ND83 568 aa12.78□□□□□ -0.36
TNPO1-205ENST00000506528 FBXO3Q9UK99 471 aa12.77□□□□□ -0.37
TNPO1-205ENST00000506528 IFNL1Q8IU54 200 aa12.75□□□□□ -0.37
TNPO1-205ENST00000506528 NUBP1P53384 320 aa12.72□□□□□ -0.37
TNPO1-205ENST00000506528 IRX5P78411 483 aaPredicted RBP12.68□□□□□ -0.38
TNPO1-205ENST00000506528 TMEM106CQ9BVX2 250 aa12.68□□□□□ -0.38
TNPO1-205ENST00000506528 PLCG2P16885 1265 aa12.66□□□□□ -0.38
TNPO1-205ENST00000506528 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
TNPO1-205ENST00000506528 MMRN1Q13201 1228 aa12.65□□□□□ -0.38
TNPO1-205ENST00000506528 SPNS2Q8IVW8 549 aa12.63□□□□□ -0.39
TNPO1-205ENST00000506528 TMEM121BQ9BXQ6 578 aaPredicted RBP12.59□□□□□ -0.39
TNPO1-205ENST00000506528 ZBTB47Q9UFB7 747 aaPredicted RBP12.57□□□□□ -0.4
TNPO1-205ENST00000506528 FAM212AQ96EL1 285 aa12.56□□□□□ -0.4
TNPO1-205ENST00000506528 OCEL1Q9H607 264 aa12.55□□□□□ -0.4
TNPO1-205ENST00000506528 MARVELD3Q96A59 401 aa12.53□□□□□ -0.4
TNPO1-205ENST00000506528 SNPHO15079 494 aa12.49□□□□□ -0.41
TNPO1-205ENST00000506528 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.49□□□□□ -0.41
TNPO1-205ENST00000506528 PYGBP11216 843 aa12.46□□□□□ -0.41
TNPO1-205ENST00000506528 PCDHB8Q9UN66 801 aa12.44□□□□□ -0.42
TNPO1-205ENST00000506528 PDCD7Q8N8D1 485 aaKnown RBP12.42□□□□□ -0.42
TNPO1-205ENST00000506528 VASPP50552 380 aaPredicted RBP12.4□□□□□ -0.42
TNPO1-205ENST00000506528 POTEB3A0JP26 581 aa12.39□□□□□ -0.43
TNPO1-205ENST00000506528 DCAF8Q5TAQ9 597 aa12.39□□□□□ -0.43
TNPO1-205ENST00000506528 POTEBQ6S5H4 581 aa12.39□□□□□ -0.43
TNPO1-205ENST00000506528 KRTAP3-3Q9BYR6 98 aa12.38□□□□□ -0.43
TNPO1-205ENST00000506528 KRTAP3-2Q9BYR7 98 aa12.38□□□□□ -0.43
TNPO1-205ENST00000506528 EMP3P54852 163 aa12.35□□□□□ -0.43
TNPO1-205ENST00000506528 HS3ST6Q96QI5 342 aa12.33□□□□□ -0.44
TNPO1-205ENST00000506528 C3orf67Q6ZVT6 689 aa12.32□□□□□ -0.44
TNPO1-205ENST00000506528 FAM205CA6NFA0 338 aa12.29□□□□□ -0.44
TNPO1-205ENST00000506528 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
TNPO1-205ENST00000506528 L3MBTL3Q96JM7 780 aaPredicted RBP12.27□□□□□ -0.45
TNPO1-205ENST00000506528 MKRN3Q13064 507 aaKnown RBP12.25□□□□□ -0.45
TNPO1-205ENST00000506528 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
TNPO1-205ENST00000506528 ZNF467Q7Z7K2 595 aaPredicted RBP12.22□□□□□ -0.45
TNPO1-205ENST00000506528 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.22□□□□□ -0.456e-9■■□□□ 13.3
TNPO1-205ENST00000506528 GOLGA2Q08379 1002 aa12.21□□□□□ -0.45
TNPO1-205ENST00000506528 ILDR1Q86SU0 546 aaPredicted RBP12.21□□□□□ -0.45
TNPO1-205ENST00000506528 HOXB3P14651 431 aaPredicted RBP12.17□□□□□ -0.46
TNPO1-205ENST00000506528 DPY19L2Q6NUT2 758 aa12.17□□□□□ -0.46
TNPO1-205ENST00000506528 CHRM1P11229 460 aaPredicted RBP12.15□□□□□ -0.46
TNPO1-205ENST00000506528 PSEN1P49768 467 aa12.15□□□□□ -0.46
TNPO1-205ENST00000506528 SPOCK2Q92563 424 aa12.15□□□□□ -0.46
TNPO1-205ENST00000506528 GSE1Q14687 1217 aa12.14□□□□□ -0.47
TNPO1-205ENST00000506528 IFNLR1Q8IU57 520 aaPredicted RBP12.12□□□□□ -0.47
TNPO1-205ENST00000506528 HOXB1P14653 301 aaPredicted RBP12.08□□□□□ -0.48
TNPO1-205ENST00000506528 BOLA1Q9Y3E2 137 aa12.06□□□□□ -0.48
TNPO1-205ENST00000506528 PDAP1Q13442 181 aaKnown RBP12.04□□□□□ -0.48
TNPO1-205ENST00000506528 CABP2Q9NPB3 220 aa12.02□□□□□ -0.49
TNPO1-205ENST00000506528 RNF166Q96A37 237 aaPredicted RBP12.01□□□□□ -0.49
TNPO1-205ENST00000506528 ERBB3P21860 1342 aa12.01□□□□□ -0.49
TNPO1-205ENST00000506528 ZNF710Q8N1W2 664 aa12□□□□□ -0.49
TNPO1-205ENST00000506528 DOK7Q18PE1 504 aa11.98□□□□□ -0.49
TNPO1-205ENST00000506528 G3V3G9 751 aa11.97□□□□□ -0.49
TNPO1-205ENST00000506528 TRIM41Q8WV44 630 aa11.96□□□□□ -0.49
TNPO1-205ENST00000506528 RTN4Q9NQC3 1192 aaKnown RBP11.96□□□□□ -0.49
TNPO1-205ENST00000506528 VARS2Q5ST30 1063 aaKnown RBP11.95□□□□□ -0.5
TNPO1-205ENST00000506528 MYT1LQ9UL68 1186 aa11.93□□□□□ -0.5
TNPO1-205ENST00000506528 CIZ1Q9ULV3 898 aaPredicted RBP11.93□□□□□ -0.5
TNPO1-205ENST00000506528 TMEM92Q6UXU6 159 aa11.89□□□□□ -0.51
TNPO1-205ENST00000506528 ZNF687Q8N1G0 1237 aa11.88□□□□□ -0.51
TNPO1-205ENST00000506528 RIMBP2O15034 1052 aa11.86□□□□□ -0.51
TNPO1-205ENST00000506528 EFCAB3Q8N7B9 438 aa11.85□□□□□ -0.51
TNPO1-205ENST00000506528 GPR153Q6NV75 609 aa11.84□□□□□ -0.51
TNPO1-205ENST00000506528 ECM2O94769 699 aaPredicted RBP11.83□□□□□ -0.52
TNPO1-205ENST00000506528 ZSWIM6Q9HCJ5 1215 aa11.83□□□□□ -0.52
TNPO1-205ENST00000506528 MICALL2Q8IY33 904 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms