RNA–Protein interactions for RNA: ENST00000506510.6

PDE4D-215, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-215ENST00000506510 DCAF8Q5TAQ9 597 aa13.95□□□□□ -0.18
PDE4D-215ENST00000506510 PHF12Q96QT6 1004 aa13.94□□□□□ -0.18
PDE4D-215ENST00000506510 CCDC61Q9Y6R9 512 aa13.94□□□□□ -0.18
PDE4D-215ENST00000506510 CIZ1Q9ULV3 898 aaPredicted RBP13.89□□□□□ -0.19
PDE4D-215ENST00000506510 GSE1Q14687 1217 aa13.88□□□□□ -0.19
PDE4D-215ENST00000506510 GABBR2O75899 941 aa13.84□□□□□ -0.19
PDE4D-215ENST00000506510 PYGBP11216 843 aa13.82□□□□□ -0.2
PDE4D-215ENST00000506510 KIF12Q96FN5 646 aa13.81□□□□□ -0.2
PDE4D-215ENST00000506510 MAP3K13O43283 966 aa13.78□□□□□ -0.2
PDE4D-215ENST00000506510 GALR2O43603 387 aaPredicted RBP13.78□□□□□ -0.2
PDE4D-215ENST00000506510 MS4A3Q96HJ5 214 aa13.77□□□□□ -0.21
PDE4D-215ENST00000506510 CLCN6P51797 869 aa13.76□□□□□ -0.21
PDE4D-215ENST00000506510 PCDHB13Q9Y5F0 798 aa13.73□□□□□ -0.21
PDE4D-215ENST00000506510 PKD2Q13563 968 aa13.68□□□□□ -0.22
PDE4D-215ENST00000506510 CHRM1P11229 460 aaPredicted RBP13.67□□□□□ -0.22
PDE4D-215ENST00000506510 IFNL1Q8IU54 200 aa13.67□□□□□ -0.22
PDE4D-215ENST00000506510 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
PDE4D-215ENST00000506510 SGIP1Q9BQI5 828 aa13.67□□□□□ -0.22
PDE4D-215ENST00000506510 PCDHB8Q9UN66 801 aa13.64□□□□□ -0.23
PDE4D-215ENST00000506510 TRPC6Q9Y210 931 aa13.64□□□□□ -0.23
PDE4D-215ENST00000506510 ECM2O94769 699 aaPredicted RBP13.63□□□□□ -0.23
PDE4D-215ENST00000506510 DCBLD2Q96PD2 775 aa13.61□□□□□ -0.23
PDE4D-215ENST00000506510 ZNF467Q7Z7K2 595 aaPredicted RBP13.59□□□□□ -0.23
PDE4D-215ENST00000506510 POTEIP0CG38 1075 aa13.57□□□□□ -0.24
PDE4D-215ENST00000506510 RNF25Q96BH1 459 aaPredicted RBP13.57□□□□□ -0.24
PDE4D-215ENST00000506510 BMP2KQ9NSY1 1161 aaPredicted RBP13.54□□□□□ -0.24
PDE4D-215ENST00000506510 TIE1P35590 1138 aa13.53□□□□□ -0.24
PDE4D-215ENST00000506510 RGL2O15211 777 aa13.51□□□□□ -0.25
PDE4D-215ENST00000506510 RIOK3O14730 519 aaKnown RBP13.5□□□□□ -0.25
PDE4D-215ENST00000506510 ATMINO43313 823 aaPredicted RBP13.5□□□□□ -0.25
PDE4D-215ENST00000506510 TTLL13PA6NNM8 815 aa13.49□□□□□ -0.25
PDE4D-215ENST00000506510 AMER1Q5JTC6 1135 aaPredicted RBP13.49□□□□□ -0.25
PDE4D-215ENST00000506510 ASTLQ6HA08 431 aaPredicted RBP13.49□□□□□ -0.25
PDE4D-215ENST00000506510 TMEM106CQ9BVX2 250 aa13.49□□□□□ -0.25
PDE4D-215ENST00000506510 RTN4Q9NQC3 1192 aaKnown RBP13.49□□□□□ -0.25
PDE4D-215ENST00000506510 PSEN1P49768 467 aa13.47□□□□□ -0.25
PDE4D-215ENST00000506510 ATN1P54259 1190 aaPredicted RBP13.47□□□□□ -0.25
PDE4D-215ENST00000506510 PDAP1Q13442 181 aaKnown RBP13.47□□□□□ -0.25
PDE4D-215ENST00000506510 PELP1Q8IZL8 1130 aaKnown RBP13.44□□□□□ -0.26
PDE4D-215ENST00000506510 VGFO15240 615 aaPredicted RBP13.42□□□□□ -0.26
PDE4D-215ENST00000506510 TRIM35Q9UPQ4 493 aa13.42□□□□□ -0.26
PDE4D-215ENST00000506510 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.39□□□□□ -0.27
PDE4D-215ENST00000506510 ZFP91Q96JP5 570 aaPredicted RBP13.39□□□□□ -0.27
PDE4D-215ENST00000506510 TAOK2Q9UL54 1235 aa13.35□□□□□ -0.27
PDE4D-215ENST00000506510 SLC39A7Q92504 469 aa13.33□□□□□ -0.28
PDE4D-215ENST00000506510 CABP2Q9NPB3 220 aa13.33□□□□□ -0.28
PDE4D-215ENST00000506510 METRNQ9UJH8 293 aa13.32□□□□□ -0.28
PDE4D-215ENST00000506510 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
PDE4D-215ENST00000506510 STK25O00506 426 aa13.3□□□□□ -0.28
PDE4D-215ENST00000506510 DCAF8L2P0C7V8 631 aa13.3□□□□□ -0.28
PDE4D-215ENST00000506510 BCL11BQ9C0K0 894 aaPredicted RBP13.3□□□□□ -0.28
PDE4D-215ENST00000506510 C7P10643 843 aa13.28□□□□□ -0.28
PDE4D-215ENST00000506510 STK24Q9Y6E0 443 aa13.28□□□□□ -0.28
PDE4D-215ENST00000506510 MKRN3Q13064 507 aaKnown RBP13.26□□□□□ -0.29
PDE4D-215ENST00000506510 IER5LQ5T953 404 aa13.25□□□□□ -0.29
PDE4D-215ENST00000506510 EFCAB3Q8N7B9 438 aa13.23□□□□□ -0.29
PDE4D-215ENST00000506510 POTEFA5A3E0 1075 aa13.22□□□□□ -0.29
PDE4D-215ENST00000506510 SEC24BO95487 1268 aa13.22□□□□□ -0.29
PDE4D-215ENST00000506510 CHGAP10645 457 aaKnown RBP13.22□□□□□ -0.29
PDE4D-215ENST00000506510 COLQQ9Y215 455 aaPredicted RBP13.22□□□□□ -0.29
PDE4D-215ENST00000506510 IRX5P78411 483 aaPredicted RBP13.2□□□□□ -0.3
PDE4D-215ENST00000506510 HS6ST3Q8IZP7 471 aa13.2□□□□□ -0.3
PDE4D-215ENST00000506510 PLCG2P16885 1265 aa13.18□□□□□ -0.3
PDE4D-215ENST00000506510 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.17□□□□□ -0.33e-6■■■□□ 16.6
PDE4D-215ENST00000506510 POTEB2H3BUK9 544 aa13.15□□□□□ -0.3
PDE4D-215ENST00000506510 OCEL1Q9H607 264 aa13.15□□□□□ -0.3
PDE4D-215ENST00000506510 LHX8Q68G74 356 aa13.12□□□□□ -0.31
PDE4D-215ENST00000506510 PDCD7Q8N8D1 485 aaKnown RBP13.12□□□□□ -0.31
PDE4D-215ENST00000506510 SOX12O15370 315 aa13.11□□□□□ -0.31
PDE4D-215ENST00000506510 PHF8Q9UPP1 1060 aa13.11□□□□□ -0.31
PDE4D-215ENST00000506510 ILDR1Q86SU0 546 aaPredicted RBP13.09□□□□□ -0.31
PDE4D-215ENST00000506510 MFRPQ9BY79 579 aa13.08□□□□□ -0.32
PDE4D-215ENST00000506510 POTEJP0CG39 1038 aa13.06□□□□□ -0.32
PDE4D-215ENST00000506510 DPY19L2Q6NUT2 758 aa13.05□□□□□ -0.32
PDE4D-215ENST00000506510 NLRP6P59044 892 aa13.04□□□□□ -0.32
PDE4D-215ENST00000506510 MS4A4AQ96JQ5 239 aa13.04□□□□□ -0.32
PDE4D-215ENST00000506510 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
PDE4D-215ENST00000506510 FBXO22Q8NEZ5 403 aa13.03□□□□□ -0.32
PDE4D-215ENST00000506510 DNAJC5Q9H3Z4 198 aa13.02□□□□□ -0.33
PDE4D-215ENST00000506510 L3MBTL3Q96JM7 780 aaPredicted RBP12.96□□□□□ -0.33
PDE4D-215ENST00000506510 OTUD5Q96G74 571 aa12.95□□□□□ -0.34
PDE4D-215ENST00000506510 SCUBE2Q9NQ36 999 aa12.94□□□□□ -0.34
PDE4D-215ENST00000506510 BOLA1Q9Y3E2 137 aa12.94□□□□□ -0.34
PDE4D-215ENST00000506510 MAMSTRQ6ZN01 415 aa12.93□□□□□ -0.34
PDE4D-215ENST00000506510 G3V3G9 751 aa12.92□□□□□ -0.34
PDE4D-215ENST00000506510 BBXQ8WY36 941 aaPredicted RBP12.92□□□□□ -0.34
PDE4D-215ENST00000506510 PPP1R37O75864 691 aa12.9□□□□□ -0.34
PDE4D-215ENST00000506510 C3orf67Q6ZVT6 689 aa12.89□□□□□ -0.35
PDE4D-215ENST00000506510 MICALL2Q8IY33 904 aa12.88□□□□□ -0.35
PDE4D-215ENST00000506510 GTPBP6O43824 516 aaPredicted RBP12.87□□□□□ -0.35
PDE4D-215ENST00000506510 TMEM121BQ9BXQ6 578 aaPredicted RBP12.86□□□□□ -0.35
PDE4D-215ENST00000506510 RYDENQ9NUL5 291 aaKnown RBP12.86□□□□□ -0.35
PDE4D-215ENST00000506510 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.85□□□□□ -0.35
PDE4D-215ENST00000506510 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.83□□□□□ -0.36
PDE4D-215ENST00000506510 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
PDE4D-215ENST00000506510 PAXIP1Q6ZW49 1069 aaPredicted RBP12.76□□□□□ -0.37
PDE4D-215ENST00000506510 SPRYD3Q8NCJ5 442 aa12.76□□□□□ -0.37
PDE4D-215ENST00000506510 CFAP44Q96MT7 982 aa12.76□□□□□ -0.37
PDE4D-215ENST00000506510 TMEM92Q6UXU6 159 aa12.74□□□□□ -0.37
PDE4D-215ENST00000506510 C2orf72A6NCS6 295 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms