RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 STAG3Q9UJ98 1225 aa7.6□□□□□ -1.19
TRAPPC11-205ENST00000506426 POTEJP0CG39 1038 aa7.59□□□□□ -1.19
TRAPPC11-205ENST00000506426 POTEMA6NI47 508 aa7.57□□□□□ -1.2
TRAPPC11-205ENST00000506426 MS4A3Q96HJ5 214 aa7.56□□□□□ -1.2
TRAPPC11-205ENST00000506426 PAK3O75914 559 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC11-205ENST00000506426 POTEGQ6S5H5 508 aa7.55□□□□□ -1.2
TRAPPC11-205ENST00000506426 IFNLR1Q8IU57 520 aaPredicted RBP7.53□□□□□ -1.2
TRAPPC11-205ENST00000506426 METRNQ9UJH8 293 aa7.53□□□□□ -1.2
TRAPPC11-205ENST00000506426 ATMINO43313 823 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC11-205ENST00000506426 NPM1P06748 294 aaKnown RBP eCLIP7.51□□□□□ -1.21
TRAPPC11-205ENST00000506426 TSPYL2Q9H2G4 693 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC11-205ENST00000506426 ASTLQ6HA08 431 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC11-205ENST00000506426 LCE2DQ5TA82 110 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC11-205ENST00000506426 TRPC6Q9Y210 931 aa7.48□□□□□ -1.21
TRAPPC11-205ENST00000506426 ATN1P54259 1190 aaPredicted RBP7.47□□□□□ -1.21
TRAPPC11-205ENST00000506426 PLCB2Q00722 1185 aa7.47□□□□□ -1.21
TRAPPC11-205ENST00000506426 DCAF8L2P0C7V8 631 aa7.46□□□□□ -1.22
TRAPPC11-205ENST00000506426 POTEFA5A3E0 1075 aa7.45□□□□□ -1.22
TRAPPC11-205ENST00000506426 C7P10643 843 aa7.44□□□□□ -1.22
TRAPPC11-205ENST00000506426 FAM163AQ96GL9 167 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC11-205ENST00000506426 CCDC61Q9Y6R9 512 aa7.44□□□□□ -1.22
TRAPPC11-205ENST00000506426 SLC39A7Q92504 469 aa7.43□□□□□ -1.22
TRAPPC11-205ENST00000506426 PKD2Q13563 968 aa7.42□□□□□ -1.22
TRAPPC11-205ENST00000506426 KLHL34Q8N239 644 aa7.42□□□□□ -1.22
TRAPPC11-205ENST00000506426 KIF12Q96FN5 646 aa7.41□□□□□ -1.22
TRAPPC11-205ENST00000506426 BMP2KQ9NSY1 1161 aaPredicted RBP7.41□□□□□ -1.22
TRAPPC11-205ENST00000506426 SPOCK2Q92563 424 aa7.4□□□□□ -1.22
TRAPPC11-205ENST00000506426 MAP3K13O43283 966 aa7.39□□□□□ -1.23
TRAPPC11-205ENST00000506426 HAP1P54257 671 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC11-205ENST00000506426 COLQQ9Y215 455 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC11-205ENST00000506426 RASEFQ8IZ41 740 aa7.37□□□□□ -1.23
TRAPPC11-205ENST00000506426 PLCD3Q8N3E9 789 aa7.36□□□□□ -1.23
TRAPPC11-205ENST00000506426 ECM2O94769 699 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC11-205ENST00000506426 MAMSTRQ6ZN01 415 aa7.34□□□□□ -1.23
TRAPPC11-205ENST00000506426 MIER1Q8N108 512 aa7.33□□□□□ -1.24
TRAPPC11-205ENST00000506426 SCUBE2Q9NQ36 999 aa7.33□□□□□ -1.24
TRAPPC11-205ENST00000506426 TTLL13PA6NNM8 815 aa7.31□□□□□ -1.24
TRAPPC11-205ENST00000506426 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC11-205ENST00000506426 BBXQ8WY36 941 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC11-205ENST00000506426 PLEKHG5O94827 1062 aa7.29□□□□□ -1.24
TRAPPC11-205ENST00000506426 VSIG10Q8N0Z9 540 aa7.29□□□□□ -1.24
TRAPPC11-205ENST00000506426 PCDH10Q9P2E7 1040 aa7.29□□□□□ -1.24
TRAPPC11-205ENST00000506426 SEC24BO95487 1268 aa7.28□□□□□ -1.24
TRAPPC11-205ENST00000506426 TIE1P35590 1138 aa7.28□□□□□ -1.24
TRAPPC11-205ENST00000506426 ZBTB47Q9UFB7 747 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC11-205ENST00000506426 TRIM35Q9UPQ4 493 aa7.27□□□□□ -1.25
TRAPPC11-205ENST00000506426 CDAN1Q8IWY9 1227 aa7.25□□□□□ -1.25
TRAPPC11-205ENST00000506426 IFNL1Q8IU54 200 aa7.24□□□□□ -1.25
TRAPPC11-205ENST00000506426 BCANQ96GW7 911 aa7.24□□□□□ -1.25
TRAPPC11-205ENST00000506426 PCDHB13Q9Y5F0 798 aa7.24□□□□□ -1.25
TRAPPC11-205ENST00000506426 RGL2O15211 777 aa7.23□□□□□ -1.25
TRAPPC11-205ENST00000506426 PAXIP1Q6ZW49 1069 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC11-205ENST00000506426 CIZ1Q9ULV3 898 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC11-205ENST00000506426 ST18O60284 1047 aa7.21□□□□□ -1.26
TRAPPC11-205ENST00000506426 NUBP1P53384 320 aa7.21□□□□□ -1.26
TRAPPC11-205ENST00000506426 CFAP44Q96MT7 982 aa7.21□□□□□ -1.26
TRAPPC11-205ENST00000506426 SLAIN1Q8ND83 568 aa7.2□□□□□ -1.26
TRAPPC11-205ENST00000506426 TRIM41Q8WV44 630 aa7.19□□□□□ -1.26
TRAPPC11-205ENST00000506426 TMEM106CQ9BVX2 250 aa7.19□□□□□ -1.26
TRAPPC11-205ENST00000506426 SPRYD3Q8NCJ5 442 aa7.18□□□□□ -1.26
TRAPPC11-205ENST00000506426 IER5LQ5T953 404 aa7.16□□□□□ -1.26
TRAPPC11-205ENST00000506426 CHGAP10645 457 aaKnown RBP7.15□□□□□ -1.26
TRAPPC11-205ENST00000506426 KDM2AQ9Y2K7 1162 aa7.15□□□□□ -1.26
TRAPPC11-205ENST00000506426 IRX5P78411 483 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC11-205ENST00000506426 GSE1Q14687 1217 aa7.13□□□□□ -1.27
TRAPPC11-205ENST00000506426 SGIP1Q9BQI5 828 aa7.13□□□□□ -1.27
TRAPPC11-205ENST00000506426 PYGBP11216 843 aa7.12□□□□□ -1.27
TRAPPC11-205ENST00000506426 PLCG2P16885 1265 aa7.12□□□□□ -1.27
TRAPPC11-205ENST00000506426 MARVELD3Q96A59 401 aa7.12□□□□□ -1.27
TRAPPC11-205ENST00000506426 PCDHB8Q9UN66 801 aa7.11□□□□□ -1.27
TRAPPC11-205ENST00000506426 TSHZ2Q9NRE2 1034 aa7.1□□□□□ -1.27
TRAPPC11-205ENST00000506426 TAOK2Q9UL54 1235 aa7.1□□□□□ -1.27
TRAPPC11-205ENST00000506426 FAM212AQ96EL1 285 aa7.09□□□□□ -1.27
TRAPPC11-205ENST00000506426 DCAF8Q5TAQ9 597 aa7.08□□□□□ -1.28
TRAPPC11-205ENST00000506426 SPNS2Q8IVW8 549 aa7.08□□□□□ -1.28
TRAPPC11-205ENST00000506426 HS6ST3Q8IZP7 471 aa7.08□□□□□ -1.28
TRAPPC11-205ENST00000506426 MMRN1Q13201 1228 aa7.07□□□□□ -1.28
TRAPPC11-205ENST00000506426 OCEL1Q9H607 264 aa7.06□□□□□ -1.28
TRAPPC11-205ENST00000506426 PRKCSHP14314 528 aaPredicted RBP7.05□□□□□ -1.28
TRAPPC11-205ENST00000506426 DNAJC5Q9H3Z4 198 aa7.04□□□□□ -1.28
TRAPPC11-205ENST00000506426 POTEB3A0JP26 581 aa7.03□□□□□ -1.28
TRAPPC11-205ENST00000506426 RIOK3O14730 519 aaKnown RBP7.03□□□□□ -1.28
TRAPPC11-205ENST00000506426 POTEBQ6S5H4 581 aa7.03□□□□□ -1.28
TRAPPC11-205ENST00000506426 RNF25Q96BH1 459 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC11-205ENST00000506426 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.02□□□□□ -1.29
TRAPPC11-205ENST00000506426 PDCD7Q8N8D1 485 aaKnown RBP7.01□□□□□ -1.29
TRAPPC11-205ENST00000506426 TPRNQ4KMQ1 711 aa6.99□□□□□ -1.29
TRAPPC11-205ENST00000506426 VGFO15240 615 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC11-205ENST00000506426 CHRM1P11229 460 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC11-205ENST00000506426 TMEM121BQ9BXQ6 578 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC11-205ENST00000506426 DPY19L2Q6NUT2 758 aa6.97□□□□□ -1.29
TRAPPC11-205ENST00000506426 STK25O00506 426 aa6.96□□□□□ -1.3
TRAPPC11-205ENST00000506426 EMP3P54852 163 aa6.96□□□□□ -1.3
TRAPPC11-205ENST00000506426 NBR1Q14596 966 aa6.96□□□□□ -1.3
TRAPPC11-205ENST00000506426 NKX1-1Q15270 411 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC11-205ENST00000506426 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.3
TRAPPC11-205ENST00000506426 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.3
TRAPPC11-205ENST00000506426 FAM205CA6NFA0 338 aa6.95□□□□□ -1.3
TRAPPC11-205ENST00000506426 SNPHO15079 494 aa6.95□□□□□ -1.3
TRAPPC11-205ENST00000506426 GTPBP6O43824 516 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms