RNA–Protein interactions for RNA: ENST00000506065.1

PRDM5-208, Transcript of PR/SET domain 5, humanhuman

TSL 5

Gene PRDM5, Length 696 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-208ENST00000506065 ZBTB47Q9UFB7 747 aaPredicted RBP15.31■□□□□ 0.04
PRDM5-208ENST00000506065 CIZ1Q9ULV3 898 aaPredicted RBP15.26■□□□□ 0.03
PRDM5-208ENST00000506065 TRIM41Q8WV44 630 aa15.21■□□□□ 0.03
PRDM5-208ENST00000506065 CHGAP10645 457 aaKnown RBP15.2■□□□□ 0.02
PRDM5-208ENST00000506065 TPRNQ4KMQ1 711 aa15.2■□□□□ 0.02
PRDM5-208ENST00000506065 EVX2Q03828 476 aa15.16■□□□□ 0.02
PRDM5-208ENST00000506065 TSHZ2Q9NRE2 1034 aa15.15■□□□□ 0.02
PRDM5-208ENST00000506065 HS6ST3Q8IZP7 471 aa15.05■□□□□ -0
PRDM5-208ENST00000506065 GSE1Q14687 1217 aa15.03■□□□□ -0
PRDM5-208ENST00000506065 NBR1Q14596 966 aa15.02■□□□□ -0
PRDM5-208ENST00000506065 PRKAR2AP13861 404 aaKnown RBP15□□□□□ -0.01
PRDM5-208ENST00000506065 CLEC11AQ9Y240 323 aa14.97□□□□□ -0.01
PRDM5-208ENST00000506065 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.01
PRDM5-208ENST00000506065 SPDYE1Q8NFV5 336 aaPredicted RBP14.95□□□□□ -0.02
PRDM5-208ENST00000506065 C19orf67A6NJJ6 358 aa14.87□□□□□ -0.03
PRDM5-208ENST00000506065 RNF25Q96BH1 459 aaPredicted RBP14.87□□□□□ -0.03
PRDM5-208ENST00000506065 RIOK3O14730 519 aaKnown RBP14.86□□□□□ -0.03
PRDM5-208ENST00000506065 DCAF8Q5TAQ9 597 aa14.84□□□□□ -0.03
PRDM5-208ENST00000506065 NUBP1P53384 320 aa14.83□□□□□ -0.04
PRDM5-208ENST00000506065 FAM212AQ96EL1 285 aa14.78□□□□□ -0.04
PRDM5-208ENST00000506065 GABBR2O75899 941 aa14.77□□□□□ -0.05
PRDM5-208ENST00000506065 NKX1-1Q15270 411 aaPredicted RBP14.76□□□□□ -0.05
PRDM5-208ENST00000506065 STK25O00506 426 aa14.75□□□□□ -0.05
PRDM5-208ENST00000506065 VGFO15240 615 aaPredicted RBP14.75□□□□□ -0.05
PRDM5-208ENST00000506065 GTPBP6O43824 516 aaPredicted RBP14.74□□□□□ -0.05
PRDM5-208ENST00000506065 CHADLQ6NUI6 762 aa14.74□□□□□ -0.05
PRDM5-208ENST00000506065 RYDENQ9NUL5 291 aaKnown RBP14.71□□□□□ -0.05
PRDM5-208ENST00000506065 CHRM1P11229 460 aaPredicted RBP14.67□□□□□ -0.06
PRDM5-208ENST00000506065 LHX8Q68G74 356 aa14.66□□□□□ -0.06
PRDM5-208ENST00000506065 PRR29P0C7W0 189 aa14.65□□□□□ -0.06
PRDM5-208ENST00000506065 SGIP1Q9BQI5 828 aa14.63□□□□□ -0.07
PRDM5-208ENST00000506065 CREBZFQ9NS37 354 aa14.61□□□□□ -0.07
PRDM5-208ENST00000506065 STK24Q9Y6E0 443 aa14.61□□□□□ -0.07
PRDM5-208ENST00000506065 BCL11BQ9C0K0 894 aaPredicted RBP14.59□□□□□ -0.07
PRDM5-208ENST00000506065 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.56□□□□□ -0.08
PRDM5-208ENST00000506065 MNX1P50219 401 aaPredicted RBP14.56□□□□□ -0.08
PRDM5-208ENST00000506065 ZFP91Q96JP5 570 aaPredicted RBP14.56□□□□□ -0.08
PRDM5-208ENST00000506065 RASEFQ8IZ41 740 aa14.54□□□□□ -0.08
PRDM5-208ENST00000506065 P3H3Q8IVL6 736 aa14.53□□□□□ -0.08
PRDM5-208ENST00000506065 CD44P16070 742 aaKnown RBP14.49□□□□□ -0.09
PRDM5-208ENST00000506065 PYGBP11216 843 aa14.48□□□□□ -0.09
PRDM5-208ENST00000506065 FARP1Q9Y4F1 1045 aaPredicted RBP14.47□□□□□ -0.09
PRDM5-208ENST00000506065 POTEIP0CG38 1075 aa14.46□□□□□ -0.09
PRDM5-208ENST00000506065 WDR70Q9NW82 654 aa14.41□□□□□ -0.1
PRDM5-208ENST00000506065 ERICH6Q7L0X2 663 aa14.39□□□□□ -0.11
PRDM5-208ENST00000506065 GTF3C3Q9Y5Q9 886 aa14.39□□□□□ -0.11
PRDM5-208ENST00000506065 ZNF467Q7Z7K2 595 aaPredicted RBP14.37□□□□□ -0.11
PRDM5-208ENST00000506065 TULP1O00294 542 aaPredicted RBP14.35□□□□□ -0.11
PRDM5-208ENST00000506065 CLCN6P51797 869 aa14.33□□□□□ -0.12
PRDM5-208ENST00000506065 TMEM132AQ24JP5 1023 aa14.33□□□□□ -0.12
PRDM5-208ENST00000506065 TIMELESSQ9UNS1 1208 aa14.33□□□□□ -0.12
PRDM5-208ENST00000506065 PDAP1Q13442 181 aaKnown RBP14.29□□□□□ -0.12
PRDM5-208ENST00000506065 DCBLD2Q96PD2 775 aa14.28□□□□□ -0.12
PRDM5-208ENST00000506065 KCNV2Q8TDN2 545 aa14.27□□□□□ -0.13
PRDM5-208ENST00000506065 LMOD2Q6P5Q4 547 aa14.25□□□□□ -0.13
PRDM5-208ENST00000506065 ZNF579Q8NAF0 562 aaKnown RBP14.24□□□□□ -0.13
PRDM5-208ENST00000506065 TSPYL2Q9H2G4 693 aaPredicted RBP14.24□□□□□ -0.13
PRDM5-208ENST00000506065 CADPS2Q86UW7 1296 aa14.23□□□□□ -0.13
PRDM5-208ENST00000506065 ZRANB1Q9UGI0 708 aa14.23□□□□□ -0.13
PRDM5-208ENST00000506065 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.21□□□□□ -0.13
PRDM5-208ENST00000506065 PCDHB8Q9UN66 801 aa14.15□□□□□ -0.14
PRDM5-208ENST00000506065 PCDHB13Q9Y5F0 798 aa14.15□□□□□ -0.14
PRDM5-208ENST00000506065 PSEN1P49768 467 aa14.14□□□□□ -0.15
PRDM5-208ENST00000506065 MFRPQ9BY79 579 aa14.14□□□□□ -0.15
PRDM5-208ENST00000506065 ARHGEF1Q92888 912 aaKnown RBP14.13□□□□□ -0.15
PRDM5-208ENST00000506065 PLSCR2Q9NRY7 297 aa14.13□□□□□ -0.15
PRDM5-208ENST00000506065 GALR2O43603 387 aaPredicted RBP14.11□□□□□ -0.15
PRDM5-208ENST00000506065 E2F4Q16254 413 aa14.06□□□□□ -0.16
PRDM5-208ENST00000506065 CCDC61Q9Y6R9 512 aa14.06□□□□□ -0.16
PRDM5-208ENST00000506065 NLRP6P59044 892 aa14.05□□□□□ -0.16
PRDM5-208ENST00000506065 PAK3O75914 559 aaPredicted RBP14.03□□□□□ -0.16
PRDM5-208ENST00000506065 C14orf37Q86TY3 774 aa14.03□□□□□ -0.16
PRDM5-208ENST00000506065 SOX12O15370 315 aa14.02□□□□□ -0.17
PRDM5-208ENST00000506065 OTUD5Q96G74 571 aa14.02□□□□□ -0.17
PRDM5-208ENST00000506065 ARXQ96QS3 562 aa14.01□□□□□ -0.17
PRDM5-208ENST00000506065 PHF12Q96QT6 1004 aa14□□□□□ -0.17
PRDM5-208ENST00000506065 BRPF1P55201 1214 aaPredicted RBP13.99□□□□□ -0.17
PRDM5-208ENST00000506065 ZC3H15Q8WU90 426 aaKnown RBP13.99□□□□□ -0.17
PRDM5-208ENST00000506065 POTEB2H3BUK9 544 aa13.98□□□□□ -0.17
PRDM5-208ENST00000506065 PPP1R37O75864 691 aa13.98□□□□□ -0.17
PRDM5-208ENST00000506065 EFCAB3Q8N7B9 438 aa13.98□□□□□ -0.17
PRDM5-208ENST00000506065 FBXO22Q8NEZ5 403 aa13.97□□□□□ -0.17
PRDM5-208ENST00000506065 CABP2Q9NPB3 220 aa13.97□□□□□ -0.17
PRDM5-208ENST00000506065 TESPA1A2RU30 521 aaPredicted RBP13.96□□□□□ -0.17
PRDM5-208ENST00000506065 SMYD5Q6GMV2 418 aa13.94□□□□□ -0.18
PRDM5-208ENST00000506065 IFNL1Q8IU54 200 aa13.94□□□□□ -0.18
PRDM5-208ENST00000506065 SEMA3EO15041 775 aa13.93□□□□□ -0.18
PRDM5-208ENST00000506065 PHF8Q9UPP1 1060 aa13.93□□□□□ -0.18
PRDM5-208ENST00000506065 NEUROD2Q15784 382 aa13.92□□□□□ -0.18
PRDM5-208ENST00000506065 PDE4AP27815 886 aa13.89□□□□□ -0.19
PRDM5-208ENST00000506065 PELP1Q8IZL8 1130 aaKnown RBP13.89□□□□□ -0.19
PRDM5-208ENST00000506065 SLC24A3Q9HC58 644 aa13.88□□□□□ -0.19
PRDM5-208ENST00000506065 MAP3K13O43283 966 aa13.87□□□□□ -0.19
PRDM5-208ENST00000506065 KIF12Q96FN5 646 aa13.86□□□□□ -0.19
PRDM5-208ENST00000506065 LARP6Q9BRS8 491 aaKnown RBP13.86□□□□□ -0.19
PRDM5-208ENST00000506065 NCKAP5LQ9HCH0 1330 aa13.84□□□□□ -0.19
PRDM5-208ENST00000506065 POTEMA6NI47 508 aa13.83□□□□□ -0.2
PRDM5-208ENST00000506065 MFSD10Q14728 455 aa13.82□□□□□ -0.2
PRDM5-208ENST00000506065 DDX27Q96GQ7 796 aaKnown RBP13.81□□□□□ -0.2
PRDM5-208ENST00000506065 ZMYND10O75800 440 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms