RNA–Protein interactions for RNA: ENST00000505571.5

PAPD4-209, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 3

Gene PAPD4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-209ENST00000505571 GSE1Q14687 1217 aa12.33□□□□□ -0.44
PAPD4-209ENST00000505571 ZNF579Q8NAF0 562 aaKnown RBP12.32□□□□□ -0.44
PAPD4-209ENST00000505571 CIZ1Q9ULV3 898 aaPredicted RBP12.32□□□□□ -0.44
PAPD4-209ENST00000505571 PHF12Q96QT6 1004 aa12.28□□□□□ -0.44
PAPD4-209ENST00000505571 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
PAPD4-209ENST00000505571 CLCN6P51797 869 aa12.26□□□□□ -0.45
PAPD4-209ENST00000505571 GABBR2O75899 941 aa12.22□□□□□ -0.45
PAPD4-209ENST00000505571 PYGBP11216 843 aa12.2□□□□□ -0.46
PAPD4-209ENST00000505571 KIF12Q96FN5 646 aa12.19□□□□□ -0.46
PAPD4-209ENST00000505571 MAP3K13O43283 966 aa12.16□□□□□ -0.46
PAPD4-209ENST00000505571 TRIM41Q8WV44 630 aa12.16□□□□□ -0.46
PAPD4-209ENST00000505571 PCDHB13Q9Y5F0 798 aa12.14□□□□□ -0.47
PAPD4-209ENST00000505571 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
PAPD4-209ENST00000505571 MS4A3Q96HJ5 214 aa12.13□□□□□ -0.47
PAPD4-209ENST00000505571 SGIP1Q9BQI5 828 aa12.12□□□□□ -0.47
PAPD4-209ENST00000505571 CHRM1P11229 460 aaPredicted RBP12.11□□□□□ -0.47
PAPD4-209ENST00000505571 DCBLD2Q96PD2 775 aa12.08□□□□□ -0.48
PAPD4-209ENST00000505571 ECM2O94769 699 aaPredicted RBP12.07□□□□□ -0.48
PAPD4-209ENST00000505571 ZNF467Q7Z7K2 595 aaPredicted RBP12.06□□□□□ -0.48
PAPD4-209ENST00000505571 IFNL1Q8IU54 200 aa12.04□□□□□ -0.48
PAPD4-209ENST00000505571 PKD2Q13563 968 aa12.03□□□□□ -0.48
PAPD4-209ENST00000505571 PCDHB8Q9UN66 801 aa12.03□□□□□ -0.48
PAPD4-209ENST00000505571 TIE1P35590 1138 aa11.96□□□□□ -0.49
PAPD4-209ENST00000505571 AMER1Q5JTC6 1135 aaPredicted RBP11.96□□□□□ -0.49
PAPD4-209ENST00000505571 TRPC6Q9Y210 931 aa11.96□□□□□ -0.49
PAPD4-209ENST00000505571 RIOK3O14730 519 aaKnown RBP11.95□□□□□ -0.5
PAPD4-209ENST00000505571 TAOK2Q9UL54 1235 aa11.94□□□□□ -0.5
PAPD4-209ENST00000505571 PDAP1Q13442 181 aaKnown RBP11.93□□□□□ -0.5
PAPD4-209ENST00000505571 TMEM106CQ9BVX2 250 aa11.93□□□□□ -0.5
PAPD4-209ENST00000505571 BMP2KQ9NSY1 1161 aaPredicted RBP11.93□□□□□ -0.5
PAPD4-209ENST00000505571 PSEN1P49768 467 aa11.92□□□□□ -0.5
PAPD4-209ENST00000505571 ATMINO43313 823 aaPredicted RBP11.91□□□□□ -0.5
PAPD4-209ENST00000505571 POTEIP0CG38 1075 aa11.91□□□□□ -0.5
PAPD4-209ENST00000505571 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.5
PAPD4-209ENST00000505571 RGL2O15211 777 aa11.9□□□□□ -0.5
PAPD4-209ENST00000505571 ASTLQ6HA08 431 aaPredicted RBP11.9□□□□□ -0.5
PAPD4-209ENST00000505571 RNF25Q96BH1 459 aaPredicted RBP11.9□□□□□ -0.5
PAPD4-209ENST00000505571 VGFO15240 615 aaPredicted RBP11.89□□□□□ -0.51
PAPD4-209ENST00000505571 ATN1P54259 1190 aaPredicted RBP11.87□□□□□ -0.51
PAPD4-209ENST00000505571 RTN4Q9NQC3 1192 aaKnown RBP11.87□□□□□ -0.51
PAPD4-209ENST00000505571 GOLGA2Q08379 1002 aa11.85□□□□□ -0.51
PAPD4-209ENST00000505571 TRIM35Q9UPQ4 493 aa11.84□□□□□ -0.51
PAPD4-209ENST00000505571 DCAF8L2P0C7V8 631 aa11.82□□□□□ -0.52
PAPD4-209ENST00000505571 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.81□□□□□ -0.52
PAPD4-209ENST00000505571 PELP1Q8IZL8 1130 aaKnown RBP11.81□□□□□ -0.52
PAPD4-209ENST00000505571 SLC39A7Q92504 469 aa11.81□□□□□ -0.52
PAPD4-209ENST00000505571 ZFP91Q96JP5 570 aaPredicted RBP11.81□□□□□ -0.52
PAPD4-209ENST00000505571 C7P10643 843 aa11.78□□□□□ -0.52
PAPD4-209ENST00000505571 MKRN3Q13064 507 aaKnown RBP11.78□□□□□ -0.52
PAPD4-209ENST00000505571 STK25O00506 426 aa11.77□□□□□ -0.53
PAPD4-209ENST00000505571 CABP2Q9NPB3 220 aa11.77□□□□□ -0.53
PAPD4-209ENST00000505571 METRNQ9UJH8 293 aa11.76□□□□□ -0.53
PAPD4-209ENST00000505571 STK24Q9Y6E0 443 aa11.76□□□□□ -0.53
PAPD4-209ENST00000505571 IER5LQ5T953 404 aa11.75□□□□□ -0.53
PAPD4-209ENST00000505571 BCL11BQ9C0K0 894 aaPredicted RBP11.75□□□□□ -0.53
PAPD4-209ENST00000505571 SEC24BO95487 1268 aa11.74□□□□□ -0.53
PAPD4-209ENST00000505571 CHGAP10645 457 aaKnown RBP11.71□□□□□ -0.53
PAPD4-209ENST00000505571 PLCG2P16885 1265 aa11.69□□□□□ -0.54
PAPD4-209ENST00000505571 EFCAB3Q8N7B9 438 aa11.68□□□□□ -0.54
PAPD4-209ENST00000505571 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.66□□□□□ -0.543e-8■□□□□ 10.8
PAPD4-209ENST00000505571 HS6ST3Q8IZP7 471 aa11.65□□□□□ -0.54
PAPD4-209ENST00000505571 OCEL1Q9H607 264 aa11.65□□□□□ -0.54
PAPD4-209ENST00000505571 SOX12O15370 315 aa11.63□□□□□ -0.55
PAPD4-209ENST00000505571 IRX5P78411 483 aaPredicted RBP11.63□□□□□ -0.55
PAPD4-209ENST00000505571 COLQQ9Y215 455 aaPredicted RBP11.63□□□□□ -0.55
PAPD4-209ENST00000505571 LHX8Q68G74 356 aa11.61□□□□□ -0.55
PAPD4-209ENST00000505571 POTEFA5A3E0 1075 aa11.59□□□□□ -0.55
PAPD4-209ENST00000505571 NLRP6P59044 892 aa11.57□□□□□ -0.56
PAPD4-209ENST00000505571 PHF8Q9UPP1 1060 aa11.56□□□□□ -0.56
PAPD4-209ENST00000505571 G3V3G9 751 aa11.54□□□□□ -0.56
PAPD4-209ENST00000505571 PDCD7Q8N8D1 485 aaKnown RBP11.54□□□□□ -0.56
PAPD4-209ENST00000505571 POTEB2H3BUK9 544 aa11.53□□□□□ -0.56
PAPD4-209ENST00000505571 L3MBTL3Q96JM7 780 aaPredicted RBP11.53□□□□□ -0.56
PAPD4-209ENST00000505571 ILDR1Q86SU0 546 aaPredicted RBP11.52□□□□□ -0.57
PAPD4-209ENST00000505571 MAMSTRQ6ZN01 415 aa11.51□□□□□ -0.57
PAPD4-209ENST00000505571 MFRPQ9BY79 579 aa11.51□□□□□ -0.57
PAPD4-209ENST00000505571 DPY19L2Q6NUT2 758 aa11.5□□□□□ -0.57
PAPD4-209ENST00000505571 DNAJC5Q9H3Z4 198 aa11.5□□□□□ -0.57
PAPD4-209ENST00000505571 SCUBE2Q9NQ36 999 aa11.49□□□□□ -0.57
PAPD4-209ENST00000505571 RYDENQ9NUL5 291 aaKnown RBP11.48□□□□□ -0.57
PAPD4-209ENST00000505571 FBXO22Q8NEZ5 403 aa11.47□□□□□ -0.57
PAPD4-209ENST00000505571 BBXQ8WY36 941 aaPredicted RBP11.46□□□□□ -0.57
PAPD4-209ENST00000505571 MS4A4AQ96JQ5 239 aa11.46□□□□□ -0.57
PAPD4-209ENST00000505571 BOLA1Q9Y3E2 137 aa11.45□□□□□ -0.58
PAPD4-209ENST00000505571 POTEJP0CG39 1038 aa11.44□□□□□ -0.58
PAPD4-209ENST00000505571 NKX1-1Q15270 411 aaPredicted RBP11.44□□□□□ -0.58
PAPD4-209ENST00000505571 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.44□□□□□ -0.58
PAPD4-209ENST00000505571 C3orf67Q6ZVT6 689 aa11.43□□□□□ -0.58
PAPD4-209ENST00000505571 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.41□□□□□ -0.58
PAPD4-209ENST00000505571 OTUD5Q96G74 571 aa11.39□□□□□ -0.59
PAPD4-209ENST00000505571 MICALL2Q8IY33 904 aa11.37□□□□□ -0.59
PAPD4-209ENST00000505571 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
PAPD4-209ENST00000505571 PPP1R37O75864 691 aa11.34□□□□□ -0.59
PAPD4-209ENST00000505571 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
PAPD4-209ENST00000505571 TMEM121BQ9BXQ6 578 aaPredicted RBP11.34□□□□□ -0.59
PAPD4-209ENST00000505571 SPRYD3Q8NCJ5 442 aa11.33□□□□□ -0.6
PAPD4-209ENST00000505571 CFAP44Q96MT7 982 aa11.31□□□□□ -0.6
PAPD4-209ENST00000505571 PAXIP1Q6ZW49 1069 aaPredicted RBP11.3□□□□□ -0.6
PAPD4-209ENST00000505571 TMC2Q8TDI7 906 aa11.22□□□□□ -0.61
PAPD4-209ENST00000505571 SNPHO15079 494 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms