RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SPDYE4A6NLX3 237 aa10.88□□□□□ -0.67
TRAPPC13-208ENST00000505553 ATMINO43313 823 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC13-208ENST00000505553 MS4A3Q96HJ5 214 aa10.85□□□□□ -0.67
TRAPPC13-208ENST00000505553 SCUBE2Q9NQ36 999 aa10.84□□□□□ -0.67
TRAPPC13-208ENST00000505553 MNX1P50219 401 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC13-208ENST00000505553 FAM163AQ96GL9 167 aaPredicted RBP10.79□□□□□ -0.68
TRAPPC13-208ENST00000505553 POTEJP0CG39 1038 aa10.78□□□□□ -0.68
TRAPPC13-208ENST00000505553 CSRNP3Q8WYN3 585 aa10.77□□□□□ -0.68
TRAPPC13-208ENST00000505553 EHMT2Q96KQ7 1210 aa10.74□□□□□ -0.69
TRAPPC13-208ENST00000505553 ATN1P54259 1190 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC13-208ENST00000505553 LCE2DQ5TA82 110 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC13-208ENST00000505553 TSPYL2Q9H2G4 693 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC13-208ENST00000505553 CCDC61Q9Y6R9 512 aa10.67□□□□□ -0.7
TRAPPC13-208ENST00000505553 KIF12Q96FN5 646 aa10.65□□□□□ -0.7
TRAPPC13-208ENST00000505553 BMP2KQ9NSY1 1161 aaPredicted RBP10.64□□□□□ -0.71
TRAPPC13-208ENST00000505553 TIE1P35590 1138 aa10.63□□□□□ -0.71
TRAPPC13-208ENST00000505553 SEC24BO95487 1268 aa10.61□□□□□ -0.71
TRAPPC13-208ENST00000505553 POTEFA5A3E0 1075 aa10.6□□□□□ -0.71
TRAPPC13-208ENST00000505553 PLEKHG5O94827 1062 aa10.6□□□□□ -0.71
TRAPPC13-208ENST00000505553 CDAN1Q8IWY9 1227 aa10.58□□□□□ -0.72
TRAPPC13-208ENST00000505553 MAP3K13O43283 966 aa10.56□□□□□ -0.72
TRAPPC13-208ENST00000505553 TRPC6Q9Y210 931 aa10.54□□□□□ -0.72
TRAPPC13-208ENST00000505553 IER5LQ5T953 404 aa10.52□□□□□ -0.73
TRAPPC13-208ENST00000505553 TTLL13PA6NNM8 815 aa10.51□□□□□ -0.73
TRAPPC13-208ENST00000505553 COLQQ9Y215 455 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC13-208ENST00000505553 PROM2Q8N271 834 aa10.5□□□□□ -0.73
TRAPPC13-208ENST00000505553 SGIP1Q9BQI5 828 aa10.48□□□□□ -0.73
TRAPPC13-208ENST00000505553 SLAIN1Q8ND83 568 aa10.47□□□□□ -0.73
TRAPPC13-208ENST00000505553 TRIM35Q9UPQ4 493 aa10.47□□□□□ -0.73
TRAPPC13-208ENST00000505553 RASEFQ8IZ41 740 aa10.46□□□□□ -0.74
TRAPPC13-208ENST00000505553 MIER1Q8N108 512 aa10.46□□□□□ -0.74
TRAPPC13-208ENST00000505553 ST18O60284 1047 aa10.43□□□□□ -0.74
TRAPPC13-208ENST00000505553 PCDHB13Q9Y5F0 798 aa10.42□□□□□ -0.74
TRAPPC13-208ENST00000505553 PLCG2P16885 1265 aa10.39□□□□□ -0.75
TRAPPC13-208ENST00000505553 TMEM121BQ9BXQ6 578 aaPredicted RBP10.37□□□□□ -0.75
TRAPPC13-208ENST00000505553 ZBTB47Q9UFB7 747 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC13-208ENST00000505553 SNPHO15079 494 aa10.34□□□□□ -0.75
TRAPPC13-208ENST00000505553 MMRN1Q13201 1228 aa10.34□□□□□ -0.75
TRAPPC13-208ENST00000505553 PLCD3Q8N3E9 789 aa10.33□□□□□ -0.76
TRAPPC13-208ENST00000505553 TMEM106CQ9BVX2 250 aa10.33□□□□□ -0.76
TRAPPC13-208ENST00000505553 SPNS2Q8IVW8 549 aa10.33□□□□□ -0.76
TRAPPC13-208ENST00000505553 IFNL1Q8IU54 200 aa10.31□□□□□ -0.76
TRAPPC13-208ENST00000505553 IRX5P78411 483 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC13-208ENST00000505553 FAM212AQ96EL1 285 aa10.27□□□□□ -0.77
TRAPPC13-208ENST00000505553 OCEL1Q9H607 264 aa10.26□□□□□ -0.77
TRAPPC13-208ENST00000505553 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.26□□□□□ -0.77
TRAPPC13-208ENST00000505553 NUBP1P53384 320 aa10.24□□□□□ -0.77
TRAPPC13-208ENST00000505553 MARVELD3Q96A59 401 aa10.2□□□□□ -0.78
TRAPPC13-208ENST00000505553 EMP3P54852 163 aa10.15□□□□□ -0.79
TRAPPC13-208ENST00000505553 C3orf67Q6ZVT6 689 aa10.13□□□□□ -0.79
TRAPPC13-208ENST00000505553 DCAF8Q5TAQ9 597 aa10.1□□□□□ -0.79
TRAPPC13-208ENST00000505553 L3MBTL3Q96JM7 780 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC13-208ENST00000505553 PYGBP11216 843 aa10.07□□□□□ -0.8
TRAPPC13-208ENST00000505553 GOLGA2Q08379 1002 aa10.07□□□□□ -0.8
TRAPPC13-208ENST00000505553 HS3ST6Q96QI5 342 aa10.06□□□□□ -0.8
TRAPPC13-208ENST00000505553 FAM205CA6NFA0 338 aa10.05□□□□□ -0.8
TRAPPC13-208ENST00000505553 MKRN3Q13064 507 aaKnown RBP10.05□□□□□ -0.8
TRAPPC13-208ENST00000505553 PCDHB8Q9UN66 801 aa10.05□□□□□ -0.8
TRAPPC13-208ENST00000505553 KRTAP3-3Q9BYR6 98 aa10.03□□□□□ -0.8
TRAPPC13-208ENST00000505553 KRTAP3-2Q9BYR7 98 aa10.03□□□□□ -0.8
TRAPPC13-208ENST00000505553 PDCD7Q8N8D1 485 aaKnown RBP10.02□□□□□ -0.81
TRAPPC13-208ENST00000505553 ZNF467Q7Z7K2 595 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC13-208ENST00000505553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.98□□□□□ -0.81
TRAPPC13-208ENST00000505553 POTEB3A0JP26 581 aa9.97□□□□□ -0.81
TRAPPC13-208ENST00000505553 POTEBQ6S5H4 581 aa9.97□□□□□ -0.81
TRAPPC13-208ENST00000505553 G3V3G9 751 aa9.93□□□□□ -0.82
TRAPPC13-208ENST00000505553 GSE1Q14687 1217 aa9.93□□□□□ -0.82
TRAPPC13-208ENST00000505553 ZNF710Q8N1W2 664 aa9.89□□□□□ -0.83
TRAPPC13-208ENST00000505553 PSEN1P49768 467 aa9.88□□□□□ -0.83
TRAPPC13-208ENST00000505553 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC13-208ENST00000505553 FBXO3Q9UK99 471 aa9.87□□□□□ -0.83
TRAPPC13-208ENST00000505553 CHRM1P11229 460 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC13-208ENST00000505553 HOXB1P14653 301 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC13-208ENST00000505553 ERBB3P21860 1342 aa9.86□□□□□ -0.83
TRAPPC13-208ENST00000505553 DOK7Q18PE1 504 aa9.85□□□□□ -0.83
TRAPPC13-208ENST00000505553 ILDR1Q86SU0 546 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC13-208ENST00000505553 HOXB3P14651 431 aaPredicted RBP9.83□□□□□ -0.84
TRAPPC13-208ENST00000505553 BOLA1Q9Y3E2 137 aa9.83□□□□□ -0.84
TRAPPC13-208ENST00000505553 FKBP8Q14318 412 aa9.82□□□□□ -0.84
TRAPPC13-208ENST00000505553 KLHL34Q8N239 644 aa9.82□□□□□ -0.84
TRAPPC13-208ENST00000505553 RIMBP2O15034 1052 aa9.82□□□□□ -0.84
TRAPPC13-208ENST00000505553 PDAP1Q13442 181 aaKnown RBP9.81□□□□□ -0.84
TRAPPC13-208ENST00000505553 DPY19L2Q6NUT2 758 aa9.8□□□□□ -0.84
TRAPPC13-208ENST00000505553 MYT1LQ9UL68 1186 aa9.8□□□□□ -0.84
TRAPPC13-208ENST00000505553 CABP2Q9NPB3 220 aa9.76□□□□□ -0.85
TRAPPC13-208ENST00000505553 PTGER2P43116 358 aa9.75□□□□□ -0.85
TRAPPC13-208ENST00000505553 VARS2Q5ST30 1063 aaKnown RBP9.74□□□□□ -0.85
TRAPPC13-208ENST00000505553 ZSWIM6Q9HCJ5 1215 aa9.72□□□□□ -0.85
TRAPPC13-208ENST00000505553 ZNF687Q8N1G0 1237 aa9.71□□□□□ -0.86
TRAPPC13-208ENST00000505553 VASPP50552 380 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC13-208ENST00000505553 CIZ1Q9ULV3 898 aaPredicted RBP9.61□□□□□ -0.87
TRAPPC13-208ENST00000505553 GPR153Q6NV75 609 aa9.59□□□□□ -0.87
TRAPPC13-208ENST00000505553 ANKRD13DQ6ZTN6 518 aa9.59□□□□□ -0.87
TRAPPC13-208ENST00000505553 MICALL2Q8IY33 904 aa9.57□□□□□ -0.88
TRAPPC13-208ENST00000505553 EFCAB3Q8N7B9 438 aa9.56□□□□□ -0.88
TRAPPC13-208ENST00000505553 SPOCK2Q92563 424 aa9.56□□□□□ -0.88
TRAPPC13-208ENST00000505553 TMEM92Q6UXU6 159 aa9.53□□□□□ -0.88
TRAPPC13-208ENST00000505553 LSM11P83369 360 aaKnown RBP eCLIP9.52□□□□□ -0.89
TRAPPC13-208ENST00000505553 ZNF316A6NFI3 1004 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC13-208ENST00000505553 ARSIQ5FYB1 569 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms