RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 FAM212AQ96EL1 285 aa10.91□□□□□ -0.66
LINC01088-202ENST00000505149 ZRANB1Q9UGI0 708 aa10.89□□□□□ -0.67
LINC01088-202ENST00000505149 CCDC61Q9Y6R9 512 aa10.89□□□□□ -0.67
LINC01088-202ENST00000505149 GSE1Q14687 1217 aa10.88□□□□□ -0.67
LINC01088-202ENST00000505149 TSPYL2Q9H2G4 693 aaPredicted RBP10.86□□□□□ -0.67
LINC01088-202ENST00000505149 DCAF8Q5TAQ9 597 aa10.82□□□□□ -0.68
LINC01088-202ENST00000505149 TRIM41Q8WV44 630 aa10.8□□□□□ -0.68
LINC01088-202ENST00000505149 CHRM1P11229 460 aaPredicted RBP10.79□□□□□ -0.68
LINC01088-202ENST00000505149 SGIP1Q9BQI5 828 aa10.78□□□□□ -0.68
LINC01088-202ENST00000505149 KIF12Q96FN5 646 aa10.77□□□□□ -0.69
LINC01088-202ENST00000505149 PHF12Q96QT6 1004 aa10.77□□□□□ -0.69
LINC01088-202ENST00000505149 GABBR2O75899 941 aa10.74□□□□□ -0.69
LINC01088-202ENST00000505149 CIZ1Q9ULV3 898 aaPredicted RBP10.74□□□□□ -0.69
LINC01088-202ENST00000505149 MAP3K13O43283 966 aa10.7□□□□□ -0.7
LINC01088-202ENST00000505149 PYGBP11216 843 aa10.69□□□□□ -0.7
LINC01088-202ENST00000505149 PKD2Q13563 968 aa10.69□□□□□ -0.7
LINC01088-202ENST00000505149 MS4A3Q96HJ5 214 aa10.67□□□□□ -0.7
LINC01088-202ENST00000505149 GALR2O43603 387 aaPredicted RBP10.66□□□□□ -0.7
LINC01088-202ENST00000505149 POTEMA6NI47 508 aa10.65□□□□□ -0.7
LINC01088-202ENST00000505149 PCDHB13Q9Y5F0 798 aa10.65□□□□□ -0.7
LINC01088-202ENST00000505149 ZNF467Q7Z7K2 595 aaPredicted RBP10.64□□□□□ -0.71
LINC01088-202ENST00000505149 AMER1Q5JTC6 1135 aaPredicted RBP10.62□□□□□ -0.71
LINC01088-202ENST00000505149 IFNL1Q8IU54 200 aa10.62□□□□□ -0.71
LINC01088-202ENST00000505149 ECM2O94769 699 aaPredicted RBP10.59□□□□□ -0.71
LINC01088-202ENST00000505149 TIE1P35590 1138 aa10.59□□□□□ -0.71
LINC01088-202ENST00000505149 POTEGQ6S5H5 508 aa10.57□□□□□ -0.72
LINC01088-202ENST00000505149 ASTLQ6HA08 431 aaPredicted RBP10.56□□□□□ -0.72
LINC01088-202ENST00000505149 RNF25Q96BH1 459 aaPredicted RBP10.56□□□□□ -0.72
LINC01088-202ENST00000505149 RIOK3O14730 519 aaKnown RBP10.55□□□□□ -0.72
LINC01088-202ENST00000505149 PCDHB8Q9UN66 801 aa10.55□□□□□ -0.72
LINC01088-202ENST00000505149 POTEIP0CG38 1075 aa10.53□□□□□ -0.72
LINC01088-202ENST00000505149 DCBLD2Q96PD2 775 aa10.53□□□□□ -0.72
LINC01088-202ENST00000505149 TRPC6Q9Y210 931 aa10.53□□□□□ -0.72
LINC01088-202ENST00000505149 PDAP1Q13442 181 aaKnown RBP10.52□□□□□ -0.73
LINC01088-202ENST00000505149 BMP2KQ9NSY1 1161 aaPredicted RBP10.52□□□□□ -0.73
LINC01088-202ENST00000505149 TAOK2Q9UL54 1235 aa10.52□□□□□ -0.73
LINC01088-202ENST00000505149 ATMINO43313 823 aaPredicted RBP10.51□□□□□ -0.73
LINC01088-202ENST00000505149 TTLL13PA6NNM8 815 aa10.5□□□□□ -0.73
LINC01088-202ENST00000505149 RGL2O15211 777 aa10.5□□□□□ -0.73
LINC01088-202ENST00000505149 VGFO15240 615 aaPredicted RBP10.5□□□□□ -0.73
LINC01088-202ENST00000505149 RTN4Q9NQC3 1192 aaKnown RBP10.5□□□□□ -0.73
LINC01088-202ENST00000505149 PSEN1P49768 467 aa10.48□□□□□ -0.73
LINC01088-202ENST00000505149 TMEM106CQ9BVX2 250 aa10.46□□□□□ -0.73
LINC01088-202ENST00000505149 ATN1P54259 1190 aaPredicted RBP10.45□□□□□ -0.74
LINC01088-202ENST00000505149 IER5LQ5T953 404 aa10.42□□□□□ -0.74
LINC01088-202ENST00000505149 PELP1Q8IZL8 1130 aaKnown RBP10.41□□□□□ -0.74
LINC01088-202ENST00000505149 TRIM35Q9UPQ4 493 aa10.41□□□□□ -0.74
LINC01088-202ENST00000505149 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.4□□□□□ -0.74
LINC01088-202ENST00000505149 SLC39A7Q92504 469 aa10.4□□□□□ -0.74
LINC01088-202ENST00000505149 ZFP91Q96JP5 570 aaPredicted RBP10.4□□□□□ -0.74
LINC01088-202ENST00000505149 PCDH10Q9P2E7 1040 aa10.4□□□□□ -0.74
LINC01088-202ENST00000505149 C7P10643 843 aa10.39□□□□□ -0.75
LINC01088-202ENST00000505149 OTUD5Q96G74 571 aa10.36□□□□□ -0.75
LINC01088-202ENST00000505149 HS6ST3Q8IZP7 471 aa10.35□□□□□ -0.75
LINC01088-202ENST00000505149 DNAJC5Q9H3Z4 198 aa10.35□□□□□ -0.75
LINC01088-202ENST00000505149 ILDR1Q86SU0 546 aaPredicted RBP10.34□□□□□ -0.75
LINC01088-202ENST00000505149 STK25O00506 426 aa10.33□□□□□ -0.76
LINC01088-202ENST00000505149 BCL11BQ9C0K0 894 aaPredicted RBP10.33□□□□□ -0.76
LINC01088-202ENST00000505149 METRNQ9UJH8 293 aa10.33□□□□□ -0.76
LINC01088-202ENST00000505149 CABP2Q9NPB3 220 aa10.32□□□□□ -0.76
LINC01088-202ENST00000505149 IRX5P78411 483 aaPredicted RBP10.31□□□□□ -0.76
LINC01088-202ENST00000505149 GOLGA2Q08379 1002 aa10.31□□□□□ -0.76
LINC01088-202ENST00000505149 MKRN3Q13064 507 aaKnown RBP10.3□□□□□ -0.76
LINC01088-202ENST00000505149 SOX12O15370 315 aa10.29□□□□□ -0.76
LINC01088-202ENST00000505149 STK24Q9Y6E0 443 aa10.29□□□□□ -0.76
LINC01088-202ENST00000505149 POTEFA5A3E0 1075 aa10.28□□□□□ -0.76
LINC01088-202ENST00000505149 EFCAB3Q8N7B9 438 aa10.27□□□□□ -0.77
LINC01088-202ENST00000505149 OCEL1Q9H607 264 aa10.27□□□□□ -0.77
LINC01088-202ENST00000505149 CHGAP10645 457 aaKnown RBP10.26□□□□□ -0.77
LINC01088-202ENST00000505149 COLQQ9Y215 455 aaPredicted RBP10.25□□□□□ -0.77
LINC01088-202ENST00000505149 PDCD7Q8N8D1 485 aaKnown RBP10.24□□□□□ -0.77
LINC01088-202ENST00000505149 SEC24BO95487 1268 aa10.23□□□□□ -0.77
LINC01088-202ENST00000505149 PLCG2P16885 1265 aa10.23□□□□□ -0.77
LINC01088-202ENST00000505149 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.22□□□□□ -0.77
LINC01088-202ENST00000505149 FBXO22Q8NEZ5 403 aa10.2□□□□□ -0.78
LINC01088-202ENST00000505149 DCAF8L2P0C7V8 631 aa10.19□□□□□ -0.78
LINC01088-202ENST00000505149 NLRP6P59044 892 aa10.19□□□□□ -0.78
LINC01088-202ENST00000505149 MFRPQ9BY79 579 aa10.19□□□□□ -0.78
LINC01088-202ENST00000505149 POTEB2H3BUK9 544 aa10.17□□□□□ -0.78
LINC01088-202ENST00000505149 NKX1-1Q15270 411 aaPredicted RBP10.16□□□□□ -0.78
LINC01088-202ENST00000505149 MS4A4AQ96JQ5 239 aa10.16□□□□□ -0.78
LINC01088-202ENST00000505149 RYDENQ9NUL5 291 aaKnown RBP10.16□□□□□ -0.78
LINC01088-202ENST00000505149 PHF8Q9UPP1 1060 aa10.16□□□□□ -0.78
LINC01088-202ENST00000505149 BBXQ8WY36 941 aaPredicted RBP10.15□□□□□ -0.78
LINC01088-202ENST00000505149 L3MBTL3Q96JM7 780 aaPredicted RBP10.14□□□□□ -0.79
LINC01088-202ENST00000505149 POTEJP0CG39 1038 aa10.13□□□□□ -0.79
LINC01088-202ENST00000505149 LCE2DQ5TA82 110 aaPredicted RBP10.12□□□□□ -0.79
LINC01088-202ENST00000505149 MAMSTRQ6ZN01 415 aa10.12□□□□□ -0.79
LINC01088-202ENST00000505149 TMEM121BQ9BXQ6 578 aaPredicted RBP10.11□□□□□ -0.79
LINC01088-202ENST00000505149 DPY19L2Q6NUT2 758 aa10.09□□□□□ -0.79
LINC01088-202ENST00000505149 BOLA1Q9Y3E2 137 aa10.08□□□□□ -0.8
LINC01088-202ENST00000505149 GTPBP6O43824 516 aaPredicted RBP10.07□□□□□ -0.8
LINC01088-202ENST00000505149 SCUBE2Q9NQ36 999 aa10.05□□□□□ -0.8
LINC01088-202ENST00000505149 MICALL2Q8IY33 904 aa10.03□□□□□ -0.8
LINC01088-202ENST00000505149 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.03□□□□□ -0.8
LINC01088-202ENST00000505149 G3V3G9 751 aa10.02□□□□□ -0.81
LINC01088-202ENST00000505149 PPP1R37O75864 691 aa10□□□□□ -0.81
LINC01088-202ENST00000505149 C3orf67Q6ZVT6 689 aa9.99□□□□□ -0.81
LINC01088-202ENST00000505149 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.99□□□□□ -0.81
LINC01088-202ENST00000505149 SPRYD3Q8NCJ5 442 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms