RNA–Protein interactions for RNA: ENST00000504971.1

FBXO38-208, Transcript of F-box protein 38, human

TSL 3

Gene FBXO38, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FBXO38-208	ENST00000504971	GALR2	O43603	387 aa	Predicted RBP	11.67	□□□□□ -0.54
FBXO38-208	ENST00000504971	NPM1	P06748	294 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
FBXO38-208	ENST00000504971	PAK3	O75914	559 aa	Predicted RBP	11.63	□□□□□ -0.55
FBXO38-208	ENST00000504971	PHF12	Q96QT6	1004 aa		11.63	□□□□□ -0.55
FBXO38-208	ENST00000504971	ABCC9	O60706	1549 aa		11.6	□□□□□ -0.55
FBXO38-208	ENST00000504971	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.59	□□□□□ -0.55
FBXO38-208	ENST00000504971	NACAD	O15069	1562 aa		11.56	□□□□□ -0.56
FBXO38-208	ENST00000504971	DCAF8L2	P0C7V8	631 aa		11.52	□□□□□ -0.57
FBXO38-208	ENST00000504971	ARX	Q96QS3	562 aa		11.51	□□□□□ -0.57
FBXO38-208	ENST00000504971	POTEB2	H3BUK9	544 aa		11.48	□□□□□ -0.57
FBXO38-208	ENST00000504971	MS4A3	Q96HJ5	214 aa		11.48	□□□□□ -0.57
FBXO38-208	ENST00000504971	ASTL	Q6HA08	431 aa	Predicted RBP	11.47	□□□□□ -0.57
FBXO38-208	ENST00000504971	RTN4	Q9NQC3	1192 aa	Known RBP	11.47	□□□□□ -0.57
FBXO38-208	ENST00000504971	OTUD5	Q96G74	571 aa		11.46	□□□□□ -0.57
FBXO38-208	ENST00000504971	CCDC61	Q9Y6R9	512 aa		11.45	□□□□□ -0.58
FBXO38-208	ENST00000504971	RB1CC1	Q8TDY2	1594 aa		11.43	□□□□□ -0.58
FBXO38-208	ENST00000504971	ATMIN	O43313	823 aa	Predicted RBP	11.42	□□□□□ -0.58
FBXO38-208	ENST00000504971	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.4	□□□□□ -0.58
FBXO38-208	ENST00000504971	KIF12	Q96FN5	646 aa		11.38	□□□□□ -0.59
FBXO38-208	ENST00000504971	PRKCSH	P14314	528 aa	Predicted RBP	11.37	□□□□□ -0.59
FBXO38-208	ENST00000504971	RANGAP1	P46060	587 aa	Predicted RBP	11.37	□□□□□ -0.59
FBXO38-208	ENST00000504971	SLC39A7	Q92504	469 aa		11.36	□□□□□ -0.59
FBXO38-208	ENST00000504971	METRN	Q9UJH8	293 aa		11.36	□□□□□ -0.59
FBXO38-208	ENST00000504971	C7	P10643	843 aa		11.35	□□□□□ -0.59
FBXO38-208	ENST00000504971	SHROOM4	Q9ULL8	1493 aa		11.35	□□□□□ -0.59
FBXO38-208	ENST00000504971	RASEF	Q8IZ41	740 aa		11.33	□□□□□ -0.6
FBXO38-208	ENST00000504971	MIER1	Q8N108	512 aa		11.33	□□□□□ -0.6
FBXO38-208	ENST00000504971	PLEKHG5	O94827	1062 aa		11.31	□□□□□ -0.6
FBXO38-208	ENST00000504971	POTEJ	P0CG39	1038 aa		11.31	□□□□□ -0.6
FBXO38-208	ENST00000504971	ATN1	P54259	1190 aa	Predicted RBP	11.3	□□□□□ -0.6
FBXO38-208	ENST00000504971	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.28	□□□□□ -0.6
FBXO38-208	ENST00000504971	MAP3K13	O43283	966 aa		11.27	□□□□□ -0.61
FBXO38-208	ENST00000504971	TRPC6	Q9Y210	931 aa		11.27	□□□□□ -0.61
FBXO38-208	ENST00000504971	SCRIB	Q14160	1630 aa		11.27	□□□□□ -0.61
FBXO38-208	ENST00000504971	TIE1	P35590	1138 aa		11.25	□□□□□ -0.61
FBXO38-208	ENST00000504971	POTEF	A5A3E0	1075 aa		11.23	□□□□□ -0.61
FBXO38-208	ENST00000504971	NUBP1	P53384	320 aa		11.22	□□□□□ -0.61
FBXO38-208	ENST00000504971	MAMSTR	Q6ZN01	415 aa		11.22	□□□□□ -0.61
FBXO38-208	ENST00000504971	PLCD3	Q8N3E9	789 aa		11.22	□□□□□ -0.61
FBXO38-208	ENST00000504971	SGIP1	Q9BQI5	828 aa		11.2	□□□□□ -0.62
FBXO38-208	ENST00000504971	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.18	□□□□□ -0.62
FBXO38-208	ENST00000504971	POTEM	A6NI47	508 aa		11.17	□□□□□ -0.62
FBXO38-208	ENST00000504971	TTLL13P	A6NNM8	815 aa		11.17	□□□□□ -0.62
FBXO38-208	ENST00000504971	UNC13A	Q9UPW8	1703 aa		11.15	□□□□□ -0.62
FBXO38-208	ENST00000504971	FKBP8	Q14318	412 aa		11.14	□□□□□ -0.63
FBXO38-208	ENST00000504971	POTEG	Q6S5H5	508 aa		11.13	□□□□□ -0.63
FBXO38-208	ENST00000504971	LCE2D	Q5TA82	110 aa	Predicted RBP	11.12	□□□□□ -0.63
FBXO38-208	ENST00000504971	SCUBE2	Q9NQ36	999 aa		11.12	□□□□□ -0.63
FBXO38-208	ENST00000504971	PLSCR2	Q9NRY7	297 aa		11.12	□□□□□ -0.63
FBXO38-208	ENST00000504971	PCDHB13	Q9Y5F0	798 aa		11.12	□□□□□ -0.63
FBXO38-208	ENST00000504971	COLQ	Q9Y215	455 aa	Predicted RBP	11.11	□□□□□ -0.63
FBXO38-208	ENST00000504971	IER5L	Q5T953	404 aa		11.1	□□□□□ -0.63
FBXO38-208	ENST00000504971	IFNL1	Q8IU54	200 aa		11.09	□□□□□ -0.63
FBXO38-208	ENST00000504971	HOMEZ	Q8IX15	550 aa		11.09	□□□□□ -0.63
FBXO38-208	ENST00000504971	FAM212A	Q96EL1	285 aa		11.08	□□□□□ -0.64
FBXO38-208	ENST00000504971	TRIM35	Q9UPQ4	493 aa		11.07	□□□□□ -0.64
FBXO38-208	ENST00000504971	BICRA	Q9NZM4	1560 aa		11.07	□□□□□ -0.64
FBXO38-208	ENST00000504971	PCDH10	Q9P2E7	1040 aa		11.04	□□□□□ -0.64
FBXO38-208	ENST00000504971	SEC24B	O95487	1268 aa		11.03	□□□□□ -0.64
FBXO38-208	ENST00000504971	TMEM106C	Q9BVX2	250 aa		10.99	□□□□□ -0.65
FBXO38-208	ENST00000504971	EIF5B	O60841	1220 aa	Known RBP	10.98	□□□□□ -0.65
FBXO38-208	ENST00000504971	FAM163A	Q96GL9	167 aa	Predicted RBP	10.98	□□□□□ -0.65
FBXO38-208	ENST00000504971	FBXO3	Q9UK99	471 aa		10.98	□□□□□ -0.65
FBXO38-208	ENST00000504971	RSF1	Q96T23	1441 aa	Predicted RBP	10.96	□□□□□ -0.65
FBXO38-208	ENST00000504971	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	10.95	□□□□□ -0.66
FBXO38-208	ENST00000504971	SUPT5H	O00267	1087 aa	Known RBP	10.95	□□□□□ -0.66
FBXO38-208	ENST00000504971	IRX5	P78411	483 aa	Predicted RBP	10.95	□□□□□ -0.66
FBXO38-208	ENST00000504971	CECR2	Q9BXF3	1484 aa		10.93	□□□□□ -0.66
FBXO38-208	ENST00000504971	DCAF8	Q5TAQ9	597 aa		10.93	□□□□□ -0.66
FBXO38-208	ENST00000504971	TIMELESS	Q9UNS1	1208 aa		10.93	□□□□□ -0.66
FBXO38-208	ENST00000504971	PYGB	P11216	843 aa		10.92	□□□□□ -0.66
FBXO38-208	ENST00000504971	BCAN	Q96GW7	911 aa		10.91	□□□□□ -0.66
FBXO38-208	ENST00000504971	PLCG2	P16885	1265 aa		10.9	□□□□□ -0.66
FBXO38-208	ENST00000504971	MROH2B	Q7Z745	1585 aa		10.9	□□□□□ -0.67
FBXO38-208	ENST00000504971	SMARCA4	P51532	1647 aa		10.88	□□□□□ -0.67
FBXO38-208	ENST00000504971	VASP	P50552	380 aa	Predicted RBP	10.88	□□□□□ -0.67
FBXO38-208	ENST00000504971	PCDHB8	Q9UN66	801 aa		10.88	□□□□□ -0.67
FBXO38-208	ENST00000504971	TAOK2	Q9UL54	1235 aa		10.87	□□□□□ -0.67
FBXO38-208	ENST00000504971	SLAIN1	Q8ND83	568 aa		10.86	□□□□□ -0.67
FBXO38-208	ENST00000504971	OCEL1	Q9H607	264 aa		10.86	□□□□□ -0.67
FBXO38-208	ENST00000504971	TULP1	O00294	542 aa	Predicted RBP	10.84	□□□□□ -0.67
FBXO38-208	ENST00000504971	CHRM1	P11229	460 aa	Predicted RBP	10.83	□□□□□ -0.68
FBXO38-208	ENST00000504971	GSE1	Q14687	1217 aa		10.83	□□□□□ -0.68
FBXO38-208	ENST00000504971	PEG3	Q9GZU2	1588 aa		10.82	□□□□□ -0.68
FBXO38-208	ENST00000504971	ST18	O60284	1047 aa		10.8	□□□□□ -0.68
FBXO38-208	ENST00000504971	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.79	□□□□□ -0.68
FBXO38-208	ENST00000504971	WIZ	O95785	1651 aa		10.79	□□□□□ -0.68
FBXO38-208	ENST00000504971	KLHL34	Q8N239	644 aa		10.78	□□□□□ -0.68
FBXO38-208	ENST00000504971	PDCD7	Q8N8D1	485 aa	Known RBP	10.78	□□□□□ -0.68
FBXO38-208	ENST00000504971	CDAN1	Q8IWY9	1227 aa		10.76	□□□□□ -0.69
FBXO38-208	ENST00000504971	TOP2A	P11388	1531 aa	Known RBP	10.74	□□□□□ -0.69
FBXO38-208	ENST00000504971	SMARCA2	P51531	1590 aa		10.74	□□□□□ -0.69
FBXO38-208	ENST00000504971	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.73	□□□□□ -0.69
FBXO38-208	ENST00000504971	EIF4G1	Q04637	1599 aa	Known RBP	10.73	□□□□□ -0.69
FBXO38-208	ENST00000504971	ILDR1	Q86SU0	546 aa	Predicted RBP	10.71	□□□□□ -0.69
FBXO38-208	ENST00000504971	ATAD2B	Q9ULI0	1458 aa		10.71	□□□□□ -0.69
FBXO38-208	ENST00000504971	PSEN1	P49768	467 aa		10.7	□□□□□ -0.7
FBXO38-208	ENST00000504971	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.7	□□□□□ -0.7
FBXO38-208	ENST00000504971	SNPH	O15079	494 aa		10.68	□□□□□ -0.7
FBXO38-208	ENST00000504971	MKRN3	Q13064	507 aa	Known RBP	10.68	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms