RNA–Protein interactions for RNA: ENST00000504521.5

ATR-202, Transcript of ATR serine/threonine kinase, humanhuman

TSL 2

Gene ATR, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-202ENST00000504521 MS4A3Q96HJ5 214 aa12.08□□□□□ -0.48
ATR-202ENST00000504521 ATMINO43313 823 aaPredicted RBP12.07□□□□□ -0.48
ATR-202ENST00000504521 POTEJP0CG39 1038 aa12.07□□□□□ -0.48
ATR-202ENST00000504521 MNX1P50219 401 aaPredicted RBP12.06□□□□□ -0.48
ATR-202ENST00000504521 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
ATR-202ENST00000504521 LCE2DQ5TA82 110 aaPredicted RBP12□□□□□ -0.49
ATR-202ENST00000504521 FAM163AQ96GL9 167 aaPredicted RBP12□□□□□ -0.49
ATR-202ENST00000504521 SCUBE2Q9NQ36 999 aa11.99□□□□□ -0.49
ATR-202ENST00000504521 ATN1P54259 1190 aaPredicted RBP11.93□□□□□ -0.5
ATR-202ENST00000504521 CSRNP3Q8WYN3 585 aa11.91□□□□□ -0.5
ATR-202ENST00000504521 TSPYL2Q9H2G4 693 aaPredicted RBP11.91□□□□□ -0.5
ATR-202ENST00000504521 CCDC61Q9Y6R9 512 aa11.86□□□□□ -0.51
ATR-202ENST00000504521 POTEFA5A3E0 1075 aa11.83□□□□□ -0.52
ATR-202ENST00000504521 KIF12Q96FN5 646 aa11.83□□□□□ -0.52
ATR-202ENST00000504521 BMP2KQ9NSY1 1161 aaPredicted RBP11.82□□□□□ -0.52
ATR-202ENST00000504521 CDAN1Q8IWY9 1227 aa11.77□□□□□ -0.53
ATR-202ENST00000504521 TRPC6Q9Y210 931 aa11.77□□□□□ -0.53
ATR-202ENST00000504521 TIE1P35590 1138 aa11.76□□□□□ -0.53
ATR-202ENST00000504521 SEC24BO95487 1268 aa11.74□□□□□ -0.53
ATR-202ENST00000504521 MAP3K13O43283 966 aa11.73□□□□□ -0.53
ATR-202ENST00000504521 COLQQ9Y215 455 aaPredicted RBP11.72□□□□□ -0.53
ATR-202ENST00000504521 TTLL13PA6NNM8 815 aa11.68□□□□□ -0.54
ATR-202ENST00000504521 IER5LQ5T953 404 aa11.64□□□□□ -0.55
ATR-202ENST00000504521 PLEKHG5O94827 1062 aa11.63□□□□□ -0.55
ATR-202ENST00000504521 PROM2Q8N271 834 aa11.63□□□□□ -0.55
ATR-202ENST00000504521 RASEFQ8IZ41 740 aa11.62□□□□□ -0.55
ATR-202ENST00000504521 TRIM35Q9UPQ4 493 aa11.62□□□□□ -0.55
ATR-202ENST00000504521 ST18O60284 1047 aa11.61□□□□□ -0.55
ATR-202ENST00000504521 SLAIN1Q8ND83 568 aa11.61□□□□□ -0.55
ATR-202ENST00000504521 MIER1Q8N108 512 aa11.57□□□□□ -0.56
ATR-202ENST00000504521 EHMT2Q96KQ7 1210 aa11.55□□□□□ -0.56
ATR-202ENST00000504521 SGIP1Q9BQI5 828 aa11.55□□□□□ -0.56
ATR-202ENST00000504521 PCDHB13Q9Y5F0 798 aa11.55□□□□□ -0.56
ATR-202ENST00000504521 MMRN1Q13201 1228 aa11.52□□□□□ -0.57
ATR-202ENST00000504521 PLCG2P16885 1265 aa11.49□□□□□ -0.57
ATR-202ENST00000504521 SPNS2Q8IVW8 549 aa11.49□□□□□ -0.57
ATR-202ENST00000504521 IFNL1Q8IU54 200 aa11.46□□□□□ -0.57
ATR-202ENST00000504521 TMEM106CQ9BVX2 250 aa11.46□□□□□ -0.57
ATR-202ENST00000504521 TMEM121BQ9BXQ6 578 aaPredicted RBP11.46□□□□□ -0.57
ATR-202ENST00000504521 PLCD3Q8N3E9 789 aa11.42□□□□□ -0.58
ATR-202ENST00000504521 SNPHO15079 494 aa11.41□□□□□ -0.58
ATR-202ENST00000504521 IRX5P78411 483 aaPredicted RBP11.41□□□□□ -0.58
ATR-202ENST00000504521 NUBP1P53384 320 aa11.38□□□□□ -0.59
ATR-202ENST00000504521 MARVELD3Q96A59 401 aa11.37□□□□□ -0.59
ATR-202ENST00000504521 ZBTB47Q9UFB7 747 aaPredicted RBP11.37□□□□□ -0.59
ATR-202ENST00000504521 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.36□□□□□ -0.59
ATR-202ENST00000504521 FAM212AQ96EL1 285 aa11.35□□□□□ -0.59
ATR-202ENST00000504521 OCEL1Q9H607 264 aa11.35□□□□□ -0.59
ATR-202ENST00000504521 EMP3P54852 163 aa11.26□□□□□ -0.61
ATR-202ENST00000504521 C3orf67Q6ZVT6 689 aa11.2□□□□□ -0.62
ATR-202ENST00000504521 PYGBP11216 843 aa11.19□□□□□ -0.62
ATR-202ENST00000504521 KRTAP3-3Q9BYR6 98 aa11.19□□□□□ -0.62
ATR-202ENST00000504521 KRTAP3-2Q9BYR7 98 aa11.19□□□□□ -0.62
ATR-202ENST00000504521 HS3ST6Q96QI5 342 aa11.18□□□□□ -0.62
ATR-202ENST00000504521 PCDHB8Q9UN66 801 aa11.18□□□□□ -0.62
ATR-202ENST00000504521 DCAF8Q5TAQ9 597 aa11.17□□□□□ -0.62
ATR-202ENST00000504521 FAM205CA6NFA0 338 aa11.16□□□□□ -0.62
ATR-202ENST00000504521 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
ATR-202ENST00000504521 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
ATR-202ENST00000504521 PDCD7Q8N8D1 485 aaKnown RBP11.15□□□□□ -0.62
ATR-202ENST00000504521 L3MBTL3Q96JM7 780 aaPredicted RBP11.14□□□□□ -0.63
ATR-202ENST00000504521 GOLGA2Q08379 1002 aa11.1□□□□□ -0.63
ATR-202ENST00000504521 MKRN3Q13064 507 aaKnown RBP11.09□□□□□ -0.63
ATR-202ENST00000504521 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.04□□□□□ -0.64
ATR-202ENST00000504521 ZNF467Q7Z7K2 595 aaPredicted RBP11.03□□□□□ -0.64
ATR-202ENST00000504521 HOXB3P14651 431 aaPredicted RBP10.95□□□□□ -0.66
ATR-202ENST00000504521 RNF166Q96A37 237 aaPredicted RBP10.95□□□□□ -0.66
ATR-202ENST00000504521 PSEN1P49768 467 aa10.94□□□□□ -0.66
ATR-202ENST00000504521 G3V3G9 751 aa10.93□□□□□ -0.66
ATR-202ENST00000504521 GSE1Q14687 1217 aa10.93□□□□□ -0.66
ATR-202ENST00000504521 ZNF710Q8N1W2 664 aa10.93□□□□□ -0.66
ATR-202ENST00000504521 ERBB3P21860 1342 aa10.92□□□□□ -0.66
ATR-202ENST00000504521 HOXB1P14653 301 aaPredicted RBP10.92□□□□□ -0.66
ATR-202ENST00000504521 DPY19L2Q6NUT2 758 aa10.92□□□□□ -0.66
ATR-202ENST00000504521 ILDR1Q86SU0 546 aaPredicted RBP10.92□□□□□ -0.66
ATR-202ENST00000504521 CHRM1P11229 460 aaPredicted RBP10.89□□□□□ -0.67
ATR-202ENST00000504521 BOLA1Q9Y3E2 137 aa10.89□□□□□ -0.67
ATR-202ENST00000504521 DOK7Q18PE1 504 aa10.88□□□□□ -0.67
ATR-202ENST00000504521 MYT1LQ9UL68 1186 aa10.88□□□□□ -0.67
ATR-202ENST00000504521 FKBP8Q14318 412 aa10.87□□□□□ -0.67
ATR-202ENST00000504521 PDAP1Q13442 181 aaKnown RBP10.84□□□□□ -0.67
ATR-202ENST00000504521 KLHL34Q8N239 644 aa10.84□□□□□ -0.67
ATR-202ENST00000504521 FBXO3Q9UK99 471 aa10.84□□□□□ -0.67
ATR-202ENST00000504521 VARS2Q5ST30 1063 aaKnown RBP10.83□□□□□ -0.68
ATR-202ENST00000504521 RIMBP2O15034 1052 aa10.82□□□□□ -0.68
ATR-202ENST00000504521 CABP2Q9NPB3 220 aa10.82□□□□□ -0.68
ATR-202ENST00000504521 ZNF687Q8N1G0 1237 aa10.75□□□□□ -0.69
ATR-202ENST00000504521 PTGER2P43116 358 aa10.74□□□□□ -0.69
ATR-202ENST00000504521 ZSWIM6Q9HCJ5 1215 aa10.72□□□□□ -0.69
ATR-202ENST00000504521 VASPP50552 380 aaPredicted RBP10.71□□□□□ -0.69
ATR-202ENST00000504521 GPR153Q6NV75 609 aa10.65□□□□□ -0.7
ATR-202ENST00000504521 ANKRD13DQ6ZTN6 518 aa10.65□□□□□ -0.7
ATR-202ENST00000504521 TMEM92Q6UXU6 159 aa10.63□□□□□ -0.71
ATR-202ENST00000504521 MICALL2Q8IY33 904 aa10.62□□□□□ -0.71
ATR-202ENST00000504521 CIZ1Q9ULV3 898 aaPredicted RBP10.62□□□□□ -0.71
ATR-202ENST00000504521 EFCAB3Q8N7B9 438 aa10.61□□□□□ -0.71
ATR-202ENST00000504521 LSM11P83369 360 aaKnown RBP eCLIP10.57□□□□□ -0.72
ATR-202ENST00000504521 ARSIQ5FYB1 569 aa10.57□□□□□ -0.72
ATR-202ENST00000504521 SPOCK2Q92563 424 aa10.56□□□□□ -0.72
ATR-202ENST00000504521 ZNF316A6NFI3 1004 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms