RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 CIZ1Q9ULV3 898 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC13-205ENST00000504243 ZRANB1Q9UGI0 708 aa12.58□□□□□ -0.4
TRAPPC13-205ENST00000504243 TRIM41Q8WV44 630 aa12.54□□□□□ -0.4
TRAPPC13-205ENST00000504243 CCDC61Q9Y6R9 512 aa12.52□□□□□ -0.41
TRAPPC13-205ENST00000504243 PKD2Q13563 968 aa12.48□□□□□ -0.41
TRAPPC13-205ENST00000504243 ZNF579Q8NAF0 562 aaKnown RBP12.48□□□□□ -0.41
TRAPPC13-205ENST00000504243 EVX2Q03828 476 aa12.47□□□□□ -0.41
TRAPPC13-205ENST00000504243 CHRM1P11229 460 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC13-205ENST00000504243 CLCN6P51797 869 aa12.45□□□□□ -0.42
TRAPPC13-205ENST00000504243 ECM2O94769 699 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC13-205ENST00000504243 PYGBP11216 843 aa12.43□□□□□ -0.42
TRAPPC13-205ENST00000504243 PHF12Q96QT6 1004 aa12.41□□□□□ -0.42
TRAPPC13-205ENST00000504243 KIF12Q96FN5 646 aa12.4□□□□□ -0.42
TRAPPC13-205ENST00000504243 SGIP1Q9BQI5 828 aa12.4□□□□□ -0.42
TRAPPC13-205ENST00000504243 SLC24A1O60721 1099 aa12.36□□□□□ -0.43
TRAPPC13-205ENST00000504243 MAP3K13O43283 966 aa12.35□□□□□ -0.43
TRAPPC13-205ENST00000504243 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC13-205ENST00000504243 PCDHB13Q9Y5F0 798 aa12.34□□□□□ -0.43
TRAPPC13-205ENST00000504243 ZNF467Q7Z7K2 595 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC13-205ENST00000504243 TAOK2Q9UL54 1235 aa12.3□□□□□ -0.44
TRAPPC13-205ENST00000504243 GABBR2O75899 941 aa12.29□□□□□ -0.44
TRAPPC13-205ENST00000504243 DCAF8L2P0C7V8 631 aa12.29□□□□□ -0.44
TRAPPC13-205ENST00000504243 RIOK3O14730 519 aaKnown RBP12.28□□□□□ -0.44
TRAPPC13-205ENST00000504243 RGL2O15211 777 aa12.28□□□□□ -0.44
TRAPPC13-205ENST00000504243 MS4A3Q96HJ5 214 aa12.28□□□□□ -0.44
TRAPPC13-205ENST00000504243 IFNL1Q8IU54 200 aa12.27□□□□□ -0.45
TRAPPC13-205ENST00000504243 GALR2O43603 387 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC13-205ENST00000504243 RNF25Q96BH1 459 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC13-205ENST00000504243 PCDHB8Q9UN66 801 aa12.25□□□□□ -0.45
TRAPPC13-205ENST00000504243 VGFO15240 615 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC13-205ENST00000504243 PDAP1Q13442 181 aaKnown RBP12.2□□□□□ -0.46
TRAPPC13-205ENST00000504243 TIE1P35590 1138 aa12.17□□□□□ -0.46
TRAPPC13-205ENST00000504243 PSEN1P49768 467 aa12.16□□□□□ -0.46
TRAPPC13-205ENST00000504243 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
TRAPPC13-205ENST00000504243 TRPC6Q9Y210 931 aa12.13□□□□□ -0.47
TRAPPC13-205ENST00000504243 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC13-205ENST00000504243 ZFP91Q96JP5 570 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC13-205ENST00000504243 TMEM106CQ9BVX2 250 aa12.11□□□□□ -0.47
TRAPPC13-205ENST00000504243 TTLL13PA6NNM8 815 aa12.09□□□□□ -0.47
TRAPPC13-205ENST00000504243 BMP2KQ9NSY1 1161 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC13-205ENST00000504243 STK25O00506 426 aa12.08□□□□□ -0.48
TRAPPC13-205ENST00000504243 CHGAP10645 457 aaKnown RBP12.07□□□□□ -0.48
TRAPPC13-205ENST00000504243 ASTLQ6HA08 431 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC13-205ENST00000504243 HS6ST3Q8IZP7 471 aa12.06□□□□□ -0.48
TRAPPC13-205ENST00000504243 ATMINO43313 823 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC13-205ENST00000504243 BCL11BQ9C0K0 894 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC13-205ENST00000504243 STK24Q9Y6E0 443 aa12.05□□□□□ -0.48
TRAPPC13-205ENST00000504243 GOLGA2Q08379 1002 aa12.03□□□□□ -0.48
TRAPPC13-205ENST00000504243 ATN1P54259 1190 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC13-205ENST00000504243 TRIM35Q9UPQ4 493 aa12.01□□□□□ -0.49
TRAPPC13-205ENST00000504243 CABP2Q9NPB3 220 aa12□□□□□ -0.49
TRAPPC13-205ENST00000504243 POTEIP0CG38 1075 aa11.98□□□□□ -0.49
TRAPPC13-205ENST00000504243 MKRN3Q13064 507 aaKnown RBP11.97□□□□□ -0.49
TRAPPC13-205ENST00000504243 DNAJC5Q9H3Z4 198 aa11.97□□□□□ -0.49
TRAPPC13-205ENST00000504243 IER5LQ5T953 404 aa11.95□□□□□ -0.5
TRAPPC13-205ENST00000504243 PLCB2Q00722 1185 aa11.94□□□□□ -0.5
TRAPPC13-205ENST00000504243 BBXQ8WY36 941 aaPredicted RBP11.94□□□□□ -0.5
TRAPPC13-205ENST00000504243 SLC39A7Q92504 469 aa11.94□□□□□ -0.5
TRAPPC13-205ENST00000504243 SOX12O15370 315 aa11.93□□□□□ -0.5
TRAPPC13-205ENST00000504243 EFCAB3Q8N7B9 438 aa11.93□□□□□ -0.5
TRAPPC13-205ENST00000504243 PELP1Q8IZL8 1130 aaKnown RBP11.92□□□□□ -0.5
TRAPPC13-205ENST00000504243 C7P10643 843 aa11.91□□□□□ -0.5
TRAPPC13-205ENST00000504243 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC13-205ENST00000504243 HAP1P54257 671 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC13-205ENST00000504243 RYDENQ9NUL5 291 aaKnown RBP11.87□□□□□ -0.51
TRAPPC13-205ENST00000504243 NLRP6P59044 892 aa11.86□□□□□ -0.51
TRAPPC13-205ENST00000504243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.86□□□□□ -0.51
TRAPPC13-205ENST00000504243 SEC24BO95487 1268 aa11.85□□□□□ -0.51
TRAPPC13-205ENST00000504243 METRNQ9UJH8 293 aa11.85□□□□□ -0.51
TRAPPC13-205ENST00000504243 IRX5P78411 483 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC13-205ENST00000504243 OCEL1Q9H607 264 aa11.84□□□□□ -0.51
TRAPPC13-205ENST00000504243 PLCG2P16885 1265 aa11.83□□□□□ -0.52
TRAPPC13-205ENST00000504243 NKX1-1Q15270 411 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC13-205ENST00000504243 ILDR1Q86SU0 546 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC13-205ENST00000504243 MFRPQ9BY79 579 aa11.82□□□□□ -0.52
TRAPPC13-205ENST00000504243 PHF8Q9UPP1 1060 aa11.82□□□□□ -0.52
TRAPPC13-205ENST00000504243 FBXO22Q8NEZ5 403 aa11.78□□□□□ -0.52
TRAPPC13-205ENST00000504243 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
TRAPPC13-205ENST00000504243 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC13-205ENST00000504243 SPRYD3Q8NCJ5 442 aa11.77□□□□□ -0.53
TRAPPC13-205ENST00000504243 PDCD7Q8N8D1 485 aaKnown RBP11.76□□□□□ -0.53
TRAPPC13-205ENST00000504243 COLQQ9Y215 455 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC13-205ENST00000504243 GTPBP6O43824 516 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC13-205ENST00000504243 POTEFA5A3E0 1075 aa11.74□□□□□ -0.53
TRAPPC13-205ENST00000504243 MS4A4AQ96JQ5 239 aa11.73□□□□□ -0.53
TRAPPC13-205ENST00000504243 L3MBTL3Q96JM7 780 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC13-205ENST00000504243 G3V3G9 751 aa11.69□□□□□ -0.54
TRAPPC13-205ENST00000504243 DPY19L2Q6NUT2 758 aa11.68□□□□□ -0.54
TRAPPC13-205ENST00000504243 BOLA1Q9Y3E2 137 aa11.65□□□□□ -0.54
TRAPPC13-205ENST00000504243 PPP1R37O75864 691 aa11.64□□□□□ -0.55
TRAPPC13-205ENST00000504243 POTEB2H3BUK9 544 aa11.6□□□□□ -0.55
TRAPPC13-205ENST00000504243 MAMSTRQ6ZN01 415 aa11.6□□□□□ -0.55
TRAPPC13-205ENST00000504243 MICALL2Q8IY33 904 aa11.6□□□□□ -0.55
TRAPPC13-205ENST00000504243 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
TRAPPC13-205ENST00000504243 TMEM121BQ9BXQ6 578 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC13-205ENST00000504243 LHX8Q68G74 356 aa11.59□□□□□ -0.55
TRAPPC13-205ENST00000504243 C3orf67Q6ZVT6 689 aa11.57□□□□□ -0.56
TRAPPC13-205ENST00000504243 SCUBE2Q9NQ36 999 aa11.57□□□□□ -0.56
TRAPPC13-205ENST00000504243 POTEJP0CG39 1038 aa11.54□□□□□ -0.56
TRAPPC13-205ENST00000504243 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms