RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 ZRANB1Q9UGI0 708 aa8.73□□□□□ -1.01
ATXN3-208ENST00000504047 TRIM41Q8WV44 630 aa8.7□□□□□ -1.02
ATXN3-208ENST00000504047 CCDC61Q9Y6R9 512 aa8.67□□□□□ -1.02
ATXN3-208ENST00000504047 ZNF579Q8NAF0 562 aaKnown RBP8.65□□□□□ -1.02
ATXN3-208ENST00000504047 ECM2O94769 699 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-208ENST00000504047 CLCN6P51797 869 aa8.64□□□□□ -1.03
ATXN3-208ENST00000504047 PYGBP11216 843 aa8.63□□□□□ -1.03
ATXN3-208ENST00000504047 PKD2Q13563 968 aa8.63□□□□□ -1.03
ATXN3-208ENST00000504047 EVX2Q03828 476 aa8.62□□□□□ -1.03
ATXN3-208ENST00000504047 RTN4Q9NQC3 1192 aaKnown RBP8.62□□□□□ -1.03
ATXN3-208ENST00000504047 CHRM1P11229 460 aaPredicted RBP8.61□□□□□ -1.03
ATXN3-208ENST00000504047 PHF12Q96QT6 1004 aa8.61□□□□□ -1.03
ATXN3-208ENST00000504047 KIF12Q96FN5 646 aa8.59□□□□□ -1.03
ATXN3-208ENST00000504047 SGIP1Q9BQI5 828 aa8.59□□□□□ -1.03
ATXN3-208ENST00000504047 PCDHB13Q9Y5F0 798 aa8.58□□□□□ -1.04
ATXN3-208ENST00000504047 SP7Q8TDD2 431 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-208ENST00000504047 MAP3K13O43283 966 aa8.56□□□□□ -1.04
ATXN3-208ENST00000504047 ZNF467Q7Z7K2 595 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-208ENST00000504047 TAOK2Q9UL54 1235 aa8.55□□□□□ -1.04
ATXN3-208ENST00000504047 RIOK3O14730 519 aaKnown RBP8.52□□□□□ -1.05
ATXN3-208ENST00000504047 GABBR2O75899 941 aa8.52□□□□□ -1.05
ATXN3-208ENST00000504047 MS4A3Q96HJ5 214 aa8.52□□□□□ -1.05
ATXN3-208ENST00000504047 RGL2O15211 777 aa8.5□□□□□ -1.05
ATXN3-208ENST00000504047 IFNL1Q8IU54 200 aa8.5□□□□□ -1.05
ATXN3-208ENST00000504047 PCDHB8Q9UN66 801 aa8.5□□□□□ -1.05
ATXN3-208ENST00000504047 GALR2O43603 387 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-208ENST00000504047 DCAF8L2P0C7V8 631 aa8.49□□□□□ -1.05
ATXN3-208ENST00000504047 VGFO15240 615 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-208ENST00000504047 RNF25Q96BH1 459 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-208ENST00000504047 PDAP1Q13442 181 aaKnown RBP8.46□□□□□ -1.06
ATXN3-208ENST00000504047 DCBLD2Q96PD2 775 aa8.45□□□□□ -1.06
ATXN3-208ENST00000504047 TIE1P35590 1138 aa8.44□□□□□ -1.06
ATXN3-208ENST00000504047 PSEN1P49768 467 aa8.43□□□□□ -1.06
ATXN3-208ENST00000504047 TMEM106CQ9BVX2 250 aa8.41□□□□□ -1.06
ATXN3-208ENST00000504047 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-208ENST00000504047 ZFP91Q96JP5 570 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-208ENST00000504047 TRPC6Q9Y210 931 aa8.4□□□□□ -1.06
ATXN3-208ENST00000504047 STK25O00506 426 aa8.39□□□□□ -1.07
ATXN3-208ENST00000504047 GOLGA2Q08379 1002 aa8.39□□□□□ -1.07
ATXN3-208ENST00000504047 TTLL13PA6NNM8 815 aa8.38□□□□□ -1.07
ATXN3-208ENST00000504047 BMP2KQ9NSY1 1161 aaPredicted RBP8.38□□□□□ -1.07
ATXN3-208ENST00000504047 CHGAP10645 457 aaKnown RBP8.37□□□□□ -1.07
ATXN3-208ENST00000504047 ASTLQ6HA08 431 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-208ENST00000504047 STK24Q9Y6E0 443 aa8.37□□□□□ -1.07
ATXN3-208ENST00000504047 BCL11BQ9C0K0 894 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-208ENST00000504047 ATMINO43313 823 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-208ENST00000504047 HS6ST3Q8IZP7 471 aa8.35□□□□□ -1.07
ATXN3-208ENST00000504047 ATN1P54259 1190 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-208ENST00000504047 CABP2Q9NPB3 220 aa8.34□□□□□ -1.07
ATXN3-208ENST00000504047 TRIM35Q9UPQ4 493 aa8.34□□□□□ -1.07
ATXN3-208ENST00000504047 MKRN3Q13064 507 aaKnown RBP8.33□□□□□ -1.08
ATXN3-208ENST00000504047 POTEIP0CG38 1075 aa8.29□□□□□ -1.08
ATXN3-208ENST00000504047 IER5LQ5T953 404 aa8.29□□□□□ -1.08
ATXN3-208ENST00000504047 SLC39A7Q92504 469 aa8.29□□□□□ -1.08
ATXN3-208ENST00000504047 SOX12O15370 315 aa8.27□□□□□ -1.09
ATXN3-208ENST00000504047 C7P10643 843 aa8.27□□□□□ -1.09
ATXN3-208ENST00000504047 EFCAB3Q8N7B9 438 aa8.27□□□□□ -1.09
ATXN3-208ENST00000504047 DNAJC5Q9H3Z4 198 aa8.27□□□□□ -1.09
ATXN3-208ENST00000504047 BBXQ8WY36 941 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-208ENST00000504047 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.26□□□□□ -1.09
ATXN3-208ENST00000504047 SEC24BO95487 1268 aa8.25□□□□□ -1.09
ATXN3-208ENST00000504047 PELP1Q8IZL8 1130 aaKnown RBP8.25□□□□□ -1.09
ATXN3-208ENST00000504047 RYDENQ9NUL5 291 aaKnown RBP8.25□□□□□ -1.09
ATXN3-208ENST00000504047 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.24□□□□□ -1.09
ATXN3-208ENST00000504047 METRNQ9UJH8 293 aa8.24□□□□□ -1.09
ATXN3-208ENST00000504047 PLCG2P16885 1265 aa8.23□□□□□ -1.09
ATXN3-208ENST00000504047 NLRP6P59044 892 aa8.22□□□□□ -1.09
ATXN3-208ENST00000504047 OCEL1Q9H607 264 aa8.21□□□□□ -1.1
ATXN3-208ENST00000504047 IRX5P78411 483 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-208ENST00000504047 PHF8Q9UPP1 1060 aa8.19□□□□□ -1.1
ATXN3-208ENST00000504047 MFRPQ9BY79 579 aa8.18□□□□□ -1.1
ATXN3-208ENST00000504047 NKX1-1Q15270 411 aaPredicted RBP8.17□□□□□ -1.1
ATXN3-208ENST00000504047 ILDR1Q86SU0 546 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-208ENST00000504047 SPRYD3Q8NCJ5 442 aa8.16□□□□□ -1.1
ATXN3-208ENST00000504047 G3V3G9 751 aa8.15□□□□□ -1.1
ATXN3-208ENST00000504047 PDCD7Q8N8D1 485 aaKnown RBP8.15□□□□□ -1.1
ATXN3-208ENST00000504047 FBXO22Q8NEZ5 403 aa8.15□□□□□ -1.1
ATXN3-208ENST00000504047 COLQQ9Y215 455 aaPredicted RBP8.15□□□□□ -1.1
ATXN3-208ENST00000504047 L3MBTL3Q96JM7 780 aaPredicted RBP8.14□□□□□ -1.11
ATXN3-208ENST00000504047 CFAP44Q96MT7 982 aa8.14□□□□□ -1.11
ATXN3-208ENST00000504047 PAXIP1Q6ZW49 1069 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-208ENST00000504047 POTEFA5A3E0 1075 aa8.12□□□□□ -1.11
ATXN3-208ENST00000504047 GTPBP6O43824 516 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-208ENST00000504047 MS4A4AQ96JQ5 239 aa8.11□□□□□ -1.11
ATXN3-208ENST00000504047 DPY19L2Q6NUT2 758 aa8.09□□□□□ -1.11
ATXN3-208ENST00000504047 BOLA1Q9Y3E2 137 aa8.09□□□□□ -1.11
ATXN3-208ENST00000504047 PLCB2Q00722 1185 aa8.07□□□□□ -1.12
ATXN3-208ENST00000504047 MAMSTRQ6ZN01 415 aa8.07□□□□□ -1.12
ATXN3-208ENST00000504047 PPP1R37O75864 691 aa8.05□□□□□ -1.12
ATXN3-208ENST00000504047 LHX8Q68G74 356 aa8.05□□□□□ -1.12
ATXN3-208ENST00000504047 C3orf67Q6ZVT6 689 aa8.05□□□□□ -1.12
ATXN3-208ENST00000504047 MICALL2Q8IY33 904 aa8.05□□□□□ -1.12
ATXN3-208ENST00000504047 SCUBE2Q9NQ36 999 aa8.05□□□□□ -1.12
ATXN3-208ENST00000504047 TMEM121BQ9BXQ6 578 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-208ENST00000504047 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.03□□□□□ -1.12
ATXN3-208ENST00000504047 POTEB2H3BUK9 544 aa8.02□□□□□ -1.13
ATXN3-208ENST00000504047 POTEJP0CG39 1038 aa7.98□□□□□ -1.13
ATXN3-208ENST00000504047 HAP1P54257 671 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-208ENST00000504047 TMC2Q8TDI7 906 aa7.96□□□□□ -1.14
ATXN3-208ENST00000504047 PDE4AP27815 886 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms