RNA–Protein interactions for RNA: ENST00000504039.2

RAPGEF6-204, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 4

Gene RAPGEF6, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-204ENST00000504039 ATMINO43313 823 aaPredicted RBP12.71□□□□□ -0.37
RAPGEF6-204ENST00000504039 MIER1Q8N108 512 aa12.69□□□□□ -0.38
RAPGEF6-204ENST00000504039 KIF12Q96FN5 646 aa12.67□□□□□ -0.38
RAPGEF6-204ENST00000504039 METRNQ9UJH8 293 aa12.66□□□□□ -0.38
RAPGEF6-204ENST00000504039 RASEFQ8IZ41 740 aa12.65□□□□□ -0.38
RAPGEF6-204ENST00000504039 PLEKHG5O94827 1062 aa12.63□□□□□ -0.39
RAPGEF6-204ENST00000504039 C7P10643 843 aa12.62□□□□□ -0.39
RAPGEF6-204ENST00000504039 SLC39A7Q92504 469 aa12.62□□□□□ -0.39
RAPGEF6-204ENST00000504039 POTEJP0CG39 1038 aa12.61□□□□□ -0.39
RAPGEF6-204ENST00000504039 ATN1P54259 1190 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF6-204ENST00000504039 TRPC6Q9Y210 931 aa12.61□□□□□ -0.39
RAPGEF6-204ENST00000504039 MAP3K13O43283 966 aa12.59□□□□□ -0.39
RAPGEF6-204ENST00000504039 BMP2KQ9NSY1 1161 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF6-204ENST00000504039 PLCD3Q8N3E9 789 aa12.56□□□□□ -0.4
RAPGEF6-204ENST00000504039 POTEFA5A3E0 1075 aa12.51□□□□□ -0.41
RAPGEF6-204ENST00000504039 NUBP1P53384 320 aa12.51□□□□□ -0.41
RAPGEF6-204ENST00000504039 FKBP8Q14318 412 aa12.51□□□□□ -0.41
RAPGEF6-204ENST00000504039 TIE1P35590 1138 aa12.5□□□□□ -0.41
RAPGEF6-204ENST00000504039 TTLL13PA6NNM8 815 aa12.45□□□□□ -0.42
RAPGEF6-204ENST00000504039 ZBTB47Q9UFB7 747 aaPredicted RBP12.45□□□□□ -0.42
RAPGEF6-204ENST00000504039 MAMSTRQ6ZN01 415 aa12.44□□□□□ -0.42
RAPGEF6-204ENST00000504039 POTEMA6NI47 508 aa12.43□□□□□ -0.42
RAPGEF6-204ENST00000504039 SGIP1Q9BQI5 828 aa12.43□□□□□ -0.42
RAPGEF6-204ENST00000504039 PLSCR2Q9NRY7 297 aa12.42□□□□□ -0.42
RAPGEF6-204ENST00000504039 PCDHB13Q9Y5F0 798 aa12.42□□□□□ -0.42
RAPGEF6-204ENST00000504039 COLQQ9Y215 455 aaPredicted RBP12.4□□□□□ -0.42
RAPGEF6-204ENST00000504039 POTEGQ6S5H5 508 aa12.39□□□□□ -0.43
RAPGEF6-204ENST00000504039 IFNL1Q8IU54 200 aa12.38□□□□□ -0.43
RAPGEF6-204ENST00000504039 SCUBE2Q9NQ36 999 aa12.38□□□□□ -0.43
RAPGEF6-204ENST00000504039 FAM212AQ96EL1 285 aa12.37□□□□□ -0.43
RAPGEF6-204ENST00000504039 TRIM35Q9UPQ4 493 aa12.37□□□□□ -0.43
RAPGEF6-204ENST00000504039 LCE2DQ5TA82 110 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF6-204ENST00000504039 SEC24BO95487 1268 aa12.32□□□□□ -0.44
RAPGEF6-204ENST00000504039 IER5LQ5T953 404 aa12.32□□□□□ -0.44
RAPGEF6-204ENST00000504039 TMEM106CQ9BVX2 250 aa12.28□□□□□ -0.44
RAPGEF6-204ENST00000504039 FAM163AQ96GL9 167 aaPredicted RBP12.27□□□□□ -0.45
RAPGEF6-204ENST00000504039 FBXO3Q9UK99 471 aa12.25□□□□□ -0.45
RAPGEF6-204ENST00000504039 PYGBP11216 843 aa12.24□□□□□ -0.45
RAPGEF6-204ENST00000504039 DCAF8Q5TAQ9 597 aa12.24□□□□□ -0.45
RAPGEF6-204ENST00000504039 PCDH10Q9P2E7 1040 aa12.2□□□□□ -0.46
RAPGEF6-204ENST00000504039 IRX5P78411 483 aaPredicted RBP12.19□□□□□ -0.46
RAPGEF6-204ENST00000504039 PCDHB8Q9UN66 801 aa12.17□□□□□ -0.46
RAPGEF6-204ENST00000504039 PLCG2P16885 1265 aa12.16□□□□□ -0.46
RAPGEF6-204ENST00000504039 VASPP50552 380 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF6-204ENST00000504039 SLAIN1Q8ND83 568 aa12.12□□□□□ -0.47
RAPGEF6-204ENST00000504039 KLHL34Q8N239 644 aa12.1□□□□□ -0.47
RAPGEF6-204ENST00000504039 OCEL1Q9H607 264 aa12.1□□□□□ -0.47
RAPGEF6-204ENST00000504039 GSE1Q14687 1217 aa12.07□□□□□ -0.48
RAPGEF6-204ENST00000504039 ST18O60284 1047 aa12.03□□□□□ -0.48
RAPGEF6-204ENST00000504039 ZNF467Q7Z7K2 595 aaPredicted RBP12.03□□□□□ -0.48
RAPGEF6-204ENST00000504039 CHRM1P11229 460 aaPredicted RBP12.02□□□□□ -0.49
RAPGEF6-204ENST00000504039 PDCD7Q8N8D1 485 aaKnown RBP12.01□□□□□ -0.49
RAPGEF6-204ENST00000504039 CDAN1Q8IWY9 1227 aa11.98□□□□□ -0.49
RAPGEF6-204ENST00000504039 IFNLR1Q8IU57 520 aaPredicted RBP11.96□□□□□ -0.49
RAPGEF6-204ENST00000504039 PSEN1P49768 467 aa11.95□□□□□ -0.5
RAPGEF6-204ENST00000504039 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.95□□□□□ -0.5
RAPGEF6-204ENST00000504039 MKRN3Q13064 507 aaKnown RBP11.93□□□□□ -0.5
RAPGEF6-204ENST00000504039 GOLGA2Q08379 1002 aa11.91□□□□□ -0.5
RAPGEF6-204ENST00000504039 SPOCK2Q92563 424 aa11.9□□□□□ -0.5
RAPGEF6-204ENST00000504039 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.89□□□□□ -0.511e-6■■□□□ 12.7
RAPGEF6-204ENST00000504039 ILDR1Q86SU0 546 aaPredicted RBP11.88□□□□□ -0.51
RAPGEF6-204ENST00000504039 PDAP1Q13442 181 aaKnown RBP11.87□□□□□ -0.51
RAPGEF6-204ENST00000504039 TMEM121BQ9BXQ6 578 aaPredicted RBP11.87□□□□□ -0.51
RAPGEF6-204ENST00000504039 SNPHO15079 494 aa11.86□□□□□ -0.51
RAPGEF6-204ENST00000504039 L3MBTL3Q96JM7 780 aaPredicted RBP11.86□□□□□ -0.51
RAPGEF6-204ENST00000504039 CIZ1Q9ULV3 898 aaPredicted RBP11.86□□□□□ -0.51
RAPGEF6-204ENST00000504039 C3orf67Q6ZVT6 689 aa11.85□□□□□ -0.51
RAPGEF6-204ENST00000504039 DPY19L2Q6NUT2 758 aa11.82□□□□□ -0.52
RAPGEF6-204ENST00000504039 MARVELD3Q96A59 401 aa11.82□□□□□ -0.52
RAPGEF6-204ENST00000504039 CABP2Q9NPB3 220 aa11.8□□□□□ -0.52
RAPGEF6-204ENST00000504039 BOLA1Q9Y3E2 137 aa11.72□□□□□ -0.53
RAPGEF6-204ENST00000504039 SPNS2Q8IVW8 549 aa11.71□□□□□ -0.53
RAPGEF6-204ENST00000504039 EMP3P54852 163 aa11.7□□□□□ -0.54
RAPGEF6-204ENST00000504039 POTEB3A0JP26 581 aa11.69□□□□□ -0.54
RAPGEF6-204ENST00000504039 MMRN1Q13201 1228 aa11.69□□□□□ -0.54
RAPGEF6-204ENST00000504039 POTEBQ6S5H4 581 aa11.69□□□□□ -0.54
RAPGEF6-204ENST00000504039 TRIM41Q8WV44 630 aa11.67□□□□□ -0.54
RAPGEF6-204ENST00000504039 EFCAB3Q8N7B9 438 aa11.66□□□□□ -0.54
RAPGEF6-204ENST00000504039 HOXB3P14651 431 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF6-204ENST00000504039 HS3ST6Q96QI5 342 aa11.65□□□□□ -0.54
RAPGEF6-204ENST00000504039 G3V3G9 751 aa11.64□□□□□ -0.55
RAPGEF6-204ENST00000504039 FAM205CA6NFA0 338 aa11.63□□□□□ -0.55
RAPGEF6-204ENST00000504039 RNF25Q96BH1 459 aaPredicted RBP11.62□□□□□ -0.55
RAPGEF6-204ENST00000504039 KRTAP3-3Q9BYR6 98 aa11.62□□□□□ -0.55
RAPGEF6-204ENST00000504039 KRTAP3-2Q9BYR7 98 aa11.62□□□□□ -0.55
RAPGEF6-204ENST00000504039 RIOK3O14730 519 aaKnown RBP11.56□□□□□ -0.56
RAPGEF6-204ENST00000504039 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.54□□□□□ -0.56
RAPGEF6-204ENST00000504039 HOXB1P14653 301 aaPredicted RBP11.54□□□□□ -0.56
RAPGEF6-204ENST00000504039 TMEM92Q6UXU6 159 aa11.54□□□□□ -0.56
RAPGEF6-204ENST00000504039 MICALL2Q8IY33 904 aa11.54□□□□□ -0.56
RAPGEF6-204ENST00000504039 ZFP91Q96JP5 570 aaPredicted RBP11.54□□□□□ -0.56
RAPGEF6-204ENST00000504039 MS4A4AQ96JQ5 239 aa11.54□□□□□ -0.56
RAPGEF6-204ENST00000504039 SOX12O15370 315 aa11.52□□□□□ -0.57
RAPGEF6-204ENST00000504039 DOK7Q18PE1 504 aa11.52□□□□□ -0.57
RAPGEF6-204ENST00000504039 ZNF710Q8N1W2 664 aa11.52□□□□□ -0.57
RAPGEF6-204ENST00000504039 VGFO15240 615 aaPredicted RBP11.5□□□□□ -0.57
RAPGEF6-204ENST00000504039 PHF8Q9UPP1 1060 aa11.5□□□□□ -0.57
RAPGEF6-204ENST00000504039 ERBB3P21860 1342 aa11.45□□□□□ -0.58
RAPGEF6-204ENST00000504039 RIMBP2O15034 1052 aa11.43□□□□□ -0.58
RAPGEF6-204ENST00000504039 VARS2Q5ST30 1063 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms