RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 ATMINO43313 823 aaPredicted RBP15.14■□□□□ 0.01
UBE3D-205ENST00000503942 METRNQ9UJH8 293 aa15.11■□□□□ 0.01
UBE3D-205ENST00000503942 SLC39A7Q92504 469 aa15.09■□□□□ 0.01
UBE3D-205ENST00000503942 PLEKHG5O94827 1062 aa15.08■□□□□ 0
UBE3D-205ENST00000503942 C7P10643 843 aa15.08■□□□□ 0
UBE3D-205ENST00000503942 MIER1Q8N108 512 aa15.07■□□□□ 0
UBE3D-205ENST00000503942 KIF12Q96FN5 646 aa15.07■□□□□ 0
UBE3D-205ENST00000503942 RASEFQ8IZ41 740 aa15.02■□□□□ -0
UBE3D-205ENST00000503942 PLSCR2Q9NRY7 297 aa15.01□□□□□ -0.01
UBE3D-205ENST00000503942 ATN1P54259 1190 aaPredicted RBP14.99□□□□□ -0.01
UBE3D-205ENST00000503942 POTEJP0CG39 1038 aa14.98□□□□□ -0.01
UBE3D-205ENST00000503942 MAP3K13O43283 966 aa14.96□□□□□ -0.01
UBE3D-205ENST00000503942 BMP2KQ9NSY1 1161 aaPredicted RBP14.96□□□□□ -0.01
UBE3D-205ENST00000503942 TRPC6Q9Y210 931 aa14.94□□□□□ -0.02
UBE3D-205ENST00000503942 PLCD3Q8N3E9 789 aa14.93□□□□□ -0.02
UBE3D-205ENST00000503942 MAMSTRQ6ZN01 415 aa14.92□□□□□ -0.02
UBE3D-205ENST00000503942 TIE1P35590 1138 aa14.91□□□□□ -0.02
UBE3D-205ENST00000503942 POTEMA6NI47 508 aa14.87□□□□□ -0.03
UBE3D-205ENST00000503942 ZBTB47Q9UFB7 747 aaPredicted RBP14.86□□□□□ -0.03
UBE3D-205ENST00000503942 POTEFA5A3E0 1075 aa14.85□□□□□ -0.03
UBE3D-205ENST00000503942 NUBP1P53384 320 aa14.83□□□□□ -0.04
UBE3D-205ENST00000503942 POTEGQ6S5H5 508 aa14.83□□□□□ -0.04
UBE3D-205ENST00000503942 TTLL13PA6NNM8 815 aa14.82□□□□□ -0.04
UBE3D-205ENST00000503942 SGIP1Q9BQI5 828 aa14.82□□□□□ -0.04
UBE3D-205ENST00000503942 SCUBE2Q9NQ36 999 aa14.82□□□□□ -0.04
UBE3D-205ENST00000503942 FKBP8Q14318 412 aa14.78□□□□□ -0.04
UBE3D-205ENST00000503942 PCDHB13Q9Y5F0 798 aa14.78□□□□□ -0.04
UBE3D-205ENST00000503942 COLQQ9Y215 455 aaPredicted RBP14.74□□□□□ -0.05
UBE3D-205ENST00000503942 FAM212AQ96EL1 285 aa14.73□□□□□ -0.05
UBE3D-205ENST00000503942 TRIM35Q9UPQ4 493 aa14.72□□□□□ -0.05
UBE3D-205ENST00000503942 SEC24BO95487 1268 aa14.71□□□□□ -0.05
UBE3D-205ENST00000503942 IER5LQ5T953 404 aa14.71□□□□□ -0.05
UBE3D-205ENST00000503942 LCE2DQ5TA82 110 aaPredicted RBP14.7□□□□□ -0.06
UBE3D-205ENST00000503942 IFNL1Q8IU54 200 aa14.7□□□□□ -0.06
UBE3D-205ENST00000503942 PCDH10Q9P2E7 1040 aa14.66□□□□□ -0.06
UBE3D-205ENST00000503942 FAM163AQ96GL9 167 aaPredicted RBP14.64□□□□□ -0.07
UBE3D-205ENST00000503942 TMEM106CQ9BVX2 250 aa14.62□□□□□ -0.07
UBE3D-205ENST00000503942 FBXO3Q9UK99 471 aa14.57□□□□□ -0.08
UBE3D-205ENST00000503942 DCAF8Q5TAQ9 597 aa14.52□□□□□ -0.09
UBE3D-205ENST00000503942 PYGBP11216 843 aa14.51□□□□□ -0.09
UBE3D-205ENST00000503942 PLCG2P16885 1265 aa14.51□□□□□ -0.09
UBE3D-205ENST00000503942 IRX5P78411 483 aaPredicted RBP14.5□□□□□ -0.09
UBE3D-205ENST00000503942 SLAIN1Q8ND83 568 aa14.46□□□□□ -0.09
UBE3D-205ENST00000503942 PCDHB8Q9UN66 801 aa14.43□□□□□ -0.1
UBE3D-205ENST00000503942 VASPP50552 380 aaPredicted RBP14.41□□□□□ -0.1
UBE3D-205ENST00000503942 OCEL1Q9H607 264 aa14.41□□□□□ -0.1
UBE3D-205ENST00000503942 GSE1Q14687 1217 aa14.36□□□□□ -0.11
UBE3D-205ENST00000503942 KLHL34Q8N239 644 aa14.36□□□□□ -0.11
UBE3D-205ENST00000503942 ST18O60284 1047 aa14.34□□□□□ -0.11
UBE3D-205ENST00000503942 ZNF467Q7Z7K2 595 aaPredicted RBP14.33□□□□□ -0.12
UBE3D-205ENST00000503942 CDAN1Q8IWY9 1227 aa14.32□□□□□ -0.12
UBE3D-205ENST00000503942 CHRM1P11229 460 aaPredicted RBP14.29□□□□□ -0.12
UBE3D-205ENST00000503942 PDCD7Q8N8D1 485 aaKnown RBP14.27□□□□□ -0.13
UBE3D-205ENST00000503942 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.27□□□□□ -0.13
UBE3D-205ENST00000503942 TMEM121BQ9BXQ6 578 aaPredicted RBP14.23□□□□□ -0.13
UBE3D-205ENST00000503942 SNPHO15079 494 aa14.21□□□□□ -0.13
UBE3D-205ENST00000503942 GOLGA2Q08379 1002 aa14.21□□□□□ -0.13
UBE3D-205ENST00000503942 MKRN3Q13064 507 aaKnown RBP14.21□□□□□ -0.13
UBE3D-205ENST00000503942 PSEN1P49768 467 aa14.2□□□□□ -0.14
UBE3D-205ENST00000503942 C3orf67Q6ZVT6 689 aa14.16□□□□□ -0.14
UBE3D-205ENST00000503942 L3MBTL3Q96JM7 780 aaPredicted RBP14.16□□□□□ -0.14
UBE3D-205ENST00000503942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.14□□□□□ -0.15
UBE3D-205ENST00000503942 PDAP1Q13442 181 aaKnown RBP14.13□□□□□ -0.15
UBE3D-205ENST00000503942 ILDR1Q86SU0 546 aaPredicted RBP14.12□□□□□ -0.15
UBE3D-205ENST00000503942 SPOCK2Q92563 424 aa14.12□□□□□ -0.15
UBE3D-205ENST00000503942 IFNLR1Q8IU57 520 aaPredicted RBP14.11□□□□□ -0.15
UBE3D-205ENST00000503942 MARVELD3Q96A59 401 aa14.08□□□□□ -0.16
UBE3D-205ENST00000503942 CIZ1Q9ULV3 898 aaPredicted RBP14.06□□□□□ -0.16
UBE3D-205ENST00000503942 CABP2Q9NPB3 220 aa14.02□□□□□ -0.17
UBE3D-205ENST00000503942 DPY19L2Q6NUT2 758 aa14□□□□□ -0.17
UBE3D-205ENST00000503942 EMP3P54852 163 aa13.98□□□□□ -0.17
UBE3D-205ENST00000503942 SPNS2Q8IVW8 549 aa13.98□□□□□ -0.17
UBE3D-205ENST00000503942 MMRN1Q13201 1228 aa13.96□□□□□ -0.17
UBE3D-205ENST00000503942 BOLA1Q9Y3E2 137 aa13.95□□□□□ -0.18
UBE3D-205ENST00000503942 G3V3G9 751 aa13.92□□□□□ -0.18
UBE3D-205ENST00000503942 TRIM41Q8WV44 630 aa13.91□□□□□ -0.18
UBE3D-205ENST00000503942 HS3ST6Q96QI5 342 aa13.88□□□□□ -0.19
UBE3D-205ENST00000503942 POTEB3A0JP26 581 aa13.87□□□□□ -0.19
UBE3D-205ENST00000503942 POTEBQ6S5H4 581 aa13.87□□□□□ -0.19
UBE3D-205ENST00000503942 HOXB3P14651 431 aaPredicted RBP13.86□□□□□ -0.19
UBE3D-205ENST00000503942 FAM205CA6NFA0 338 aa13.85□□□□□ -0.19
UBE3D-205ENST00000503942 KRTAP3-3Q9BYR6 98 aa13.84□□□□□ -0.19
UBE3D-205ENST00000503942 KRTAP3-2Q9BYR7 98 aa13.84□□□□□ -0.19
UBE3D-205ENST00000503942 EFCAB3Q8N7B9 438 aa13.82□□□□□ -0.2
UBE3D-205ENST00000503942 HOXB1P14653 301 aaPredicted RBP13.76□□□□□ -0.21
UBE3D-205ENST00000503942 DOK7Q18PE1 504 aa13.76□□□□□ -0.21
UBE3D-205ENST00000503942 ZNF710Q8N1W2 664 aa13.76□□□□□ -0.21
UBE3D-205ENST00000503942 RIOK3O14730 519 aaKnown RBP13.73□□□□□ -0.21
UBE3D-205ENST00000503942 MICALL2Q8IY33 904 aa13.72□□□□□ -0.21
UBE3D-205ENST00000503942 RNF25Q96BH1 459 aaPredicted RBP13.72□□□□□ -0.21
UBE3D-205ENST00000503942 SOX12O15370 315 aa13.69□□□□□ -0.22
UBE3D-205ENST00000503942 RIMBP2O15034 1052 aa13.68□□□□□ -0.22
UBE3D-205ENST00000503942 TMEM92Q6UXU6 159 aa13.68□□□□□ -0.22
UBE3D-205ENST00000503942 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.67□□□□□ -0.22
UBE3D-205ENST00000503942 ZFP91Q96JP5 570 aaPredicted RBP13.67□□□□□ -0.22
UBE3D-205ENST00000503942 MS4A4AQ96JQ5 239 aa13.67□□□□□ -0.22
UBE3D-205ENST00000503942 VGFO15240 615 aaPredicted RBP13.66□□□□□ -0.22
UBE3D-205ENST00000503942 ERBB3P21860 1342 aa13.65□□□□□ -0.22
UBE3D-205ENST00000503942 ZSWIM6Q9HCJ5 1215 aa13.62□□□□□ -0.23
UBE3D-205ENST00000503942 PHF8Q9UPP1 1060 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms