RNA–Protein interactions for RNA: ENST00000503289.1

ARHGEF38-203, Transcript of Rho guanine nucleotide exchange factor 38, humanhuman

TSL 3

Gene ARHGEF38, Length 551 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38-203ENST00000503289 POTEJP0CG39 1038 aa13.5□□□□□ -0.25
ARHGEF38-203ENST00000503289 ATMINO43313 823 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF38-203ENST00000503289 LCE2DQ5TA82 110 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF38-203ENST00000503289 FAM163AQ96GL9 167 aaPredicted RBP13.46□□□□□ -0.25
ARHGEF38-203ENST00000503289 MS4A3Q96HJ5 214 aa13.44□□□□□ -0.26
ARHGEF38-203ENST00000503289 SCUBE2Q9NQ36 999 aa13.41□□□□□ -0.26
ARHGEF38-203ENST00000503289 MNX1P50219 401 aaPredicted RBP13.38□□□□□ -0.27
ARHGEF38-203ENST00000503289 ATN1P54259 1190 aaPredicted RBP13.29□□□□□ -0.28
ARHGEF38-203ENST00000503289 SPDYE4A6NLX3 237 aa13.27□□□□□ -0.29
ARHGEF38-203ENST00000503289 CDAN1Q8IWY9 1227 aa13.22□□□□□ -0.29
ARHGEF38-203ENST00000503289 POTEFA5A3E0 1075 aa13.21□□□□□ -0.29
ARHGEF38-203ENST00000503289 TSPYL2Q9H2G4 693 aaPredicted RBP13.21□□□□□ -0.29
ARHGEF38-203ENST00000503289 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
ARHGEF38-203ENST00000503289 BMP2KQ9NSY1 1161 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF38-203ENST00000503289 KIF12Q96FN5 646 aa13.14□□□□□ -0.31
ARHGEF38-203ENST00000503289 TIE1P35590 1138 aa13.09□□□□□ -0.31
ARHGEF38-203ENST00000503289 TRPC6Q9Y210 931 aa13.09□□□□□ -0.31
ARHGEF38-203ENST00000503289 SEC24BO95487 1268 aa13.08□□□□□ -0.32
ARHGEF38-203ENST00000503289 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF38-203ENST00000503289 MAP3K13O43283 966 aa13.02□□□□□ -0.33
ARHGEF38-203ENST00000503289 TTLL13PA6NNM8 815 aa12.99□□□□□ -0.33
ARHGEF38-203ENST00000503289 ST18O60284 1047 aa12.99□□□□□ -0.33
ARHGEF38-203ENST00000503289 CSRNP3Q8WYN3 585 aa12.98□□□□□ -0.33
ARHGEF38-203ENST00000503289 IER5LQ5T953 404 aa12.96□□□□□ -0.33
ARHGEF38-203ENST00000503289 SLAIN1Q8ND83 568 aa12.96□□□□□ -0.33
ARHGEF38-203ENST00000503289 MMRN1Q13201 1228 aa12.95□□□□□ -0.34
ARHGEF38-203ENST00000503289 TRIM35Q9UPQ4 493 aa12.92□□□□□ -0.34
ARHGEF38-203ENST00000503289 SPNS2Q8IVW8 549 aa12.91□□□□□ -0.34
ARHGEF38-203ENST00000503289 RASEFQ8IZ41 740 aa12.86□□□□□ -0.35
ARHGEF38-203ENST00000503289 PLEKHG5O94827 1062 aa12.85□□□□□ -0.35
ARHGEF38-203ENST00000503289 SGIP1Q9BQI5 828 aa12.83□□□□□ -0.36
ARHGEF38-203ENST00000503289 TMEM121BQ9BXQ6 578 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF38-203ENST00000503289 PROM2Q8N271 834 aa12.81□□□□□ -0.36
ARHGEF38-203ENST00000503289 PCDHB13Q9Y5F0 798 aa12.8□□□□□ -0.36
ARHGEF38-203ENST00000503289 PLCG2P16885 1265 aa12.78□□□□□ -0.36
ARHGEF38-203ENST00000503289 MIER1Q8N108 512 aa12.77□□□□□ -0.37
ARHGEF38-203ENST00000503289 SNPHO15079 494 aa12.74□□□□□ -0.37
ARHGEF38-203ENST00000503289 TMEM106CQ9BVX2 250 aa12.71□□□□□ -0.37
ARHGEF38-203ENST00000503289 IRX5P78411 483 aaPredicted RBP12.69□□□□□ -0.38
ARHGEF38-203ENST00000503289 IFNL1Q8IU54 200 aa12.69□□□□□ -0.38
ARHGEF38-203ENST00000503289 MARVELD3Q96A59 401 aa12.69□□□□□ -0.38
ARHGEF38-203ENST00000503289 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.65□□□□□ -0.38
ARHGEF38-203ENST00000503289 OCEL1Q9H607 264 aa12.63□□□□□ -0.39
ARHGEF38-203ENST00000503289 PLCD3Q8N3E9 789 aa12.58□□□□□ -0.4
ARHGEF38-203ENST00000503289 NUBP1P53384 320 aa12.57□□□□□ -0.4
ARHGEF38-203ENST00000503289 EMP3P54852 163 aa12.56□□□□□ -0.4
ARHGEF38-203ENST00000503289 ZBTB47Q9UFB7 747 aaPredicted RBP12.55□□□□□ -0.4
ARHGEF38-203ENST00000503289 FAM212AQ96EL1 285 aa12.53□□□□□ -0.4
ARHGEF38-203ENST00000503289 KRTAP3-3Q9BYR6 98 aa12.52□□□□□ -0.41
ARHGEF38-203ENST00000503289 KRTAP3-2Q9BYR7 98 aa12.52□□□□□ -0.41
ARHGEF38-203ENST00000503289 HS3ST6Q96QI5 342 aa12.49□□□□□ -0.41
ARHGEF38-203ENST00000503289 POTEB3A0JP26 581 aa12.46□□□□□ -0.41
ARHGEF38-203ENST00000503289 FAM205CA6NFA0 338 aa12.46□□□□□ -0.41
ARHGEF38-203ENST00000503289 POTEBQ6S5H4 581 aa12.46□□□□□ -0.41
ARHGEF38-203ENST00000503289 C3orf67Q6ZVT6 689 aa12.45□□□□□ -0.42
ARHGEF38-203ENST00000503289 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
ARHGEF38-203ENST00000503289 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
ARHGEF38-203ENST00000503289 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
ARHGEF38-203ENST00000503289 PYGBP11216 843 aa12.36□□□□□ -0.43
ARHGEF38-203ENST00000503289 PCDHB8Q9UN66 801 aa12.35□□□□□ -0.43
ARHGEF38-203ENST00000503289 DCAF8Q5TAQ9 597 aa12.33□□□□□ -0.44
ARHGEF38-203ENST00000503289 GOLGA2Q08379 1002 aa12.29□□□□□ -0.44
ARHGEF38-203ENST00000503289 MKRN3Q13064 507 aaKnown RBP12.29□□□□□ -0.44
ARHGEF38-203ENST00000503289 RNF166Q96A37 237 aaPredicted RBP12.26□□□□□ -0.45
ARHGEF38-203ENST00000503289 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.24□□□□□ -0.45
ARHGEF38-203ENST00000503289 ZNF467Q7Z7K2 595 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF38-203ENST00000503289 HOXB3P14651 431 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF38-203ENST00000503289 HOXB1P14653 301 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF38-203ENST00000503289 ERBB3P21860 1342 aa12.17□□□□□ -0.46
ARHGEF38-203ENST00000503289 ZNF710Q8N1W2 664 aa12.16□□□□□ -0.46
ARHGEF38-203ENST00000503289 MYT1LQ9UL68 1186 aa12.16□□□□□ -0.46
ARHGEF38-203ENST00000503289 G3V3G9 751 aa12.11□□□□□ -0.47
ARHGEF38-203ENST00000503289 ILDR1Q86SU0 546 aaPredicted RBP12.11□□□□□ -0.47
ARHGEF38-203ENST00000503289 DOK7Q18PE1 504 aa12.1□□□□□ -0.47
ARHGEF38-203ENST00000503289 PSEN1P49768 467 aa12.09□□□□□ -0.47
ARHGEF38-203ENST00000503289 DPY19L2Q6NUT2 758 aa12.09□□□□□ -0.47
ARHGEF38-203ENST00000503289 BOLA1Q9Y3E2 137 aa12.07□□□□□ -0.48
ARHGEF38-203ENST00000503289 VARS2Q5ST30 1063 aaKnown RBP12.06□□□□□ -0.48
ARHGEF38-203ENST00000503289 GSE1Q14687 1217 aa12.05□□□□□ -0.48
ARHGEF38-203ENST00000503289 RIMBP2O15034 1052 aa12.03□□□□□ -0.48
ARHGEF38-203ENST00000503289 CHRM1P11229 460 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF38-203ENST00000503289 PTGER2P43116 358 aa12.01□□□□□ -0.49
ARHGEF38-203ENST00000503289 ZNF687Q8N1G0 1237 aa12□□□□□ -0.49
ARHGEF38-203ENST00000503289 PDAP1Q13442 181 aaKnown RBP11.97□□□□□ -0.49
ARHGEF38-203ENST00000503289 CABP2Q9NPB3 220 aa11.94□□□□□ -0.5
ARHGEF38-203ENST00000503289 ZSWIM6Q9HCJ5 1215 aa11.92□□□□□ -0.5
ARHGEF38-203ENST00000503289 KLHL34Q8N239 644 aa11.9□□□□□ -0.5
ARHGEF38-203ENST00000503289 ANKRD13DQ6ZTN6 518 aa11.87□□□□□ -0.51
ARHGEF38-203ENST00000503289 FBXO3Q9UK99 471 aa11.86□□□□□ -0.51
ARHGEF38-203ENST00000503289 FKBP8Q14318 412 aa11.85□□□□□ -0.51
ARHGEF38-203ENST00000503289 GPR153Q6NV75 609 aa11.85□□□□□ -0.51
ARHGEF38-203ENST00000503289 PLA2G2EQ9NZK7 142 aa11.79□□□□□ -0.52
ARHGEF38-203ENST00000503289 TMEM92Q6UXU6 159 aa11.78□□□□□ -0.52
ARHGEF38-203ENST00000503289 LSM11P83369 360 aaKnown RBP eCLIP11.77□□□□□ -0.53
ARHGEF38-203ENST00000503289 MICALL2Q8IY33 904 aa11.75□□□□□ -0.53
ARHGEF38-203ENST00000503289 ARSIQ5FYB1 569 aa11.74□□□□□ -0.53
ARHGEF38-203ENST00000503289 ZNF316A6NFI3 1004 aaPredicted RBP11.72□□□□□ -0.53
ARHGEF38-203ENST00000503289 VASPP50552 380 aaPredicted RBP11.71□□□□□ -0.53
ARHGEF38-203ENST00000503289 EFCAB3Q8N7B9 438 aa11.71□□□□□ -0.53
ARHGEF38-203ENST00000503289 HCSTQ9UBK5 93 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms