RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 ZNF579Q8NAF0 562 aaKnown RBP12.08□□□□□ -0.48
RFC1-205ENST00000502991 CCDC61Q9Y6R9 512 aa12.08□□□□□ -0.48
RFC1-205ENST00000502991 FAM212AQ96EL1 285 aa12.06□□□□□ -0.48
RFC1-205ENST00000502991 GABBR2O75899 941 aa12.05□□□□□ -0.48
RFC1-205ENST00000502991 CIZ1Q9ULV3 898 aaPredicted RBP12.02□□□□□ -0.49
RFC1-205ENST00000502991 GALR2O43603 387 aaPredicted RBP11.99□□□□□ -0.49
RFC1-205ENST00000502991 PYGBP11216 843 aa11.98□□□□□ -0.49
RFC1-205ENST00000502991 KIF12Q96FN5 646 aa11.97□□□□□ -0.49
RFC1-205ENST00000502991 MAP3K13O43283 966 aa11.96□□□□□ -0.49
RFC1-205ENST00000502991 GSE1Q14687 1217 aa11.95□□□□□ -0.5
RFC1-205ENST00000502991 MS4A3Q96HJ5 214 aa11.95□□□□□ -0.5
RFC1-205ENST00000502991 TRPC6Q9Y210 931 aa11.88□□□□□ -0.51
RFC1-205ENST00000502991 PCDHB13Q9Y5F0 798 aa11.88□□□□□ -0.51
RFC1-205ENST00000502991 IFNL1Q8IU54 200 aa11.86□□□□□ -0.51
RFC1-205ENST00000502991 CLCN6P51797 869 aa11.85□□□□□ -0.51
RFC1-205ENST00000502991 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
RFC1-205ENST00000502991 PCDHB8Q9UN66 801 aa11.84□□□□□ -0.51
RFC1-205ENST00000502991 PKD2Q13563 968 aa11.81□□□□□ -0.52
RFC1-205ENST00000502991 DCBLD2Q96PD2 775 aa11.81□□□□□ -0.52
RFC1-205ENST00000502991 CHRM1P11229 460 aaPredicted RBP11.8□□□□□ -0.52
RFC1-205ENST00000502991 SGIP1Q9BQI5 828 aa11.77□□□□□ -0.53
RFC1-205ENST00000502991 ECM2O94769 699 aaPredicted RBP11.75□□□□□ -0.53
RFC1-205ENST00000502991 BMP2KQ9NSY1 1161 aaPredicted RBP11.75□□□□□ -0.53
RFC1-205ENST00000502991 RNF25Q96BH1 459 aaPredicted RBP11.74□□□□□ -0.53
RFC1-205ENST00000502991 PELP1Q8IZL8 1130 aaKnown RBP11.73□□□□□ -0.53
RFC1-205ENST00000502991 ATMINO43313 823 aaPredicted RBP11.72□□□□□ -0.53
RFC1-205ENST00000502991 TRIM41Q8WV44 630 aa11.72□□□□□ -0.53
RFC1-205ENST00000502991 ZNF467Q7Z7K2 595 aaPredicted RBP11.71□□□□□ -0.53
RFC1-205ENST00000502991 TTLL13PA6NNM8 815 aa11.7□□□□□ -0.54
RFC1-205ENST00000502991 ATN1P54259 1190 aaPredicted RBP11.7□□□□□ -0.54
RFC1-205ENST00000502991 TMEM106CQ9BVX2 250 aa11.7□□□□□ -0.54
RFC1-205ENST00000502991 ASTLQ6HA08 431 aaPredicted RBP11.69□□□□□ -0.54
RFC1-205ENST00000502991 RGL2O15211 777 aa11.68□□□□□ -0.54
RFC1-205ENST00000502991 TIE1P35590 1138 aa11.68□□□□□ -0.54
RFC1-205ENST00000502991 PSEN1P49768 467 aa11.66□□□□□ -0.54
RFC1-205ENST00000502991 RIOK3O14730 519 aaKnown RBP11.65□□□□□ -0.54
RFC1-205ENST00000502991 TRIM35Q9UPQ4 493 aa11.63□□□□□ -0.55
RFC1-205ENST00000502991 PDAP1Q13442 181 aaKnown RBP11.62□□□□□ -0.55
RFC1-205ENST00000502991 RTN4Q9NQC3 1192 aaKnown RBP11.61□□□□□ -0.55
RFC1-205ENST00000502991 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.58□□□□□ -0.56
RFC1-205ENST00000502991 ZFP91Q96JP5 570 aaPredicted RBP11.58□□□□□ -0.56
RFC1-205ENST00000502991 METRNQ9UJH8 293 aa11.56□□□□□ -0.56
RFC1-205ENST00000502991 VGFO15240 615 aaPredicted RBP11.55□□□□□ -0.56
RFC1-205ENST00000502991 SLC39A7Q92504 469 aa11.54□□□□□ -0.56
RFC1-205ENST00000502991 CABP2Q9NPB3 220 aa11.54□□□□□ -0.56
RFC1-205ENST00000502991 AMER1Q5JTC6 1135 aaPredicted RBP11.52□□□□□ -0.57
RFC1-205ENST00000502991 POTEFA5A3E0 1075 aa11.51□□□□□ -0.57
RFC1-205ENST00000502991 C7P10643 843 aa11.51□□□□□ -0.57
RFC1-205ENST00000502991 COLQQ9Y215 455 aaPredicted RBP11.51□□□□□ -0.57
RFC1-205ENST00000502991 BCL11BQ9C0K0 894 aaPredicted RBP11.5□□□□□ -0.57
RFC1-205ENST00000502991 POTEB2H3BUK9 544 aa11.49□□□□□ -0.57
RFC1-205ENST00000502991 STK25O00506 426 aa11.48□□□□□ -0.57
RFC1-205ENST00000502991 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
RFC1-205ENST00000502991 STK24Q9Y6E0 443 aa11.47□□□□□ -0.57
RFC1-205ENST00000502991 SEC24BO95487 1268 aa11.46□□□□□ -0.57
RFC1-205ENST00000502991 DCAF8L2P0C7V8 631 aa11.46□□□□□ -0.57
RFC1-205ENST00000502991 MKRN3Q13064 507 aaKnown RBP11.46□□□□□ -0.57
RFC1-205ENST00000502991 EFCAB3Q8N7B9 438 aa11.46□□□□□ -0.57
RFC1-205ENST00000502991 IER5LQ5T953 404 aa11.45□□□□□ -0.58
RFC1-205ENST00000502991 PLSCR2Q9NRY7 297 aa11.45□□□□□ -0.58
RFC1-205ENST00000502991 IRX5P78411 483 aaPredicted RBP11.44□□□□□ -0.58
RFC1-205ENST00000502991 LHX8Q68G74 356 aa11.44□□□□□ -0.58
RFC1-205ENST00000502991 TAOK2Q9UL54 1235 aa11.44□□□□□ -0.58
RFC1-205ENST00000502991 CHGAP10645 457 aaKnown RBP11.42□□□□□ -0.58
RFC1-205ENST00000502991 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.41□□□□□ -0.585e-7■□□□□ 11.3
RFC1-205ENST00000502991 POTEJP0CG39 1038 aa11.4□□□□□ -0.58
RFC1-205ENST00000502991 PLCG2P16885 1265 aa11.4□□□□□ -0.58
RFC1-205ENST00000502991 OCEL1Q9H607 264 aa11.39□□□□□ -0.59
RFC1-205ENST00000502991 DPY19L2Q6NUT2 758 aa11.37□□□□□ -0.59
RFC1-205ENST00000502991 PDCD7Q8N8D1 485 aaKnown RBP11.37□□□□□ -0.59
RFC1-205ENST00000502991 PHF8Q9UPP1 1060 aa11.36□□□□□ -0.59
RFC1-205ENST00000502991 HS6ST3Q8IZP7 471 aa11.35□□□□□ -0.59
RFC1-205ENST00000502991 ILDR1Q86SU0 546 aaPredicted RBP11.32□□□□□ -0.6
RFC1-205ENST00000502991 MS4A4AQ96JQ5 239 aa11.31□□□□□ -0.6
RFC1-205ENST00000502991 MFRPQ9BY79 579 aa11.31□□□□□ -0.6
RFC1-205ENST00000502991 SOX12O15370 315 aa11.29□□□□□ -0.6
RFC1-205ENST00000502991 OTUD5Q96G74 571 aa11.29□□□□□ -0.6
RFC1-205ENST00000502991 NKX1-1Q15270 411 aaPredicted RBP11.28□□□□□ -0.6
RFC1-205ENST00000502991 FBXO22Q8NEZ5 403 aa11.27□□□□□ -0.61
RFC1-205ENST00000502991 NLRP6P59044 892 aa11.24□□□□□ -0.61
RFC1-205ENST00000502991 PPP1R37O75864 691 aa11.19□□□□□ -0.62
RFC1-205ENST00000502991 L3MBTL3Q96JM7 780 aaPredicted RBP11.19□□□□□ -0.62
RFC1-205ENST00000502991 SCUBE2Q9NQ36 999 aa11.19□□□□□ -0.62
RFC1-205ENST00000502991 BOLA1Q9Y3E2 137 aa11.19□□□□□ -0.62
RFC1-205ENST00000502991 MAMSTRQ6ZN01 415 aa11.18□□□□□ -0.62
RFC1-205ENST00000502991 DNAJC5Q9H3Z4 198 aa11.18□□□□□ -0.62
RFC1-205ENST00000502991 G3V3G9 751 aa11.15□□□□□ -0.62
RFC1-205ENST00000502991 MICALL2Q8IY33 904 aa11.15□□□□□ -0.62
RFC1-205ENST00000502991 C3orf67Q6ZVT6 689 aa11.14□□□□□ -0.63
RFC1-205ENST00000502991 SLAIN1Q8ND83 568 aa11.13□□□□□ -0.63
RFC1-205ENST00000502991 GTPBP6O43824 516 aaPredicted RBP11.12□□□□□ -0.63
RFC1-205ENST00000502991 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.12□□□□□ -0.63
RFC1-205ENST00000502991 TMEM121BQ9BXQ6 578 aaPredicted RBP11.11□□□□□ -0.63
RFC1-205ENST00000502991 BBXQ8WY36 941 aaPredicted RBP11.09□□□□□ -0.63
RFC1-205ENST00000502991 TMEM92Q6UXU6 159 aa11.08□□□□□ -0.64
RFC1-205ENST00000502991 PAXIP1Q6ZW49 1069 aaPredicted RBP11.01□□□□□ -0.65
RFC1-205ENST00000502991 RYDENQ9NUL5 291 aaKnown RBP11.01□□□□□ -0.65
RFC1-205ENST00000502991 CFAP44Q96MT7 982 aa11□□□□□ -0.65
RFC1-205ENST00000502991 ZBTB4Q9P1Z0 1013 aaPredicted RBP11□□□□□ -0.65
RFC1-205ENST00000502991 SPRYD3Q8NCJ5 442 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms