RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 POTEB2H3BUK9 544 aa12.01□□□□□ -0.49
CDC42SE2-204ENST00000502639 SPOCK2Q92563 424 aa12□□□□□ -0.49
CDC42SE2-204ENST00000502639 OTUD5Q96G74 571 aa11.97□□□□□ -0.49
CDC42SE2-204ENST00000502639 PLEKHG5O94827 1062 aa11.96□□□□□ -0.49
CDC42SE2-204ENST00000502639 PELP1Q8IZL8 1130 aaKnown RBP11.95□□□□□ -0.5
CDC42SE2-204ENST00000502639 NUBP1P53384 320 aa11.92□□□□□ -0.5
CDC42SE2-204ENST00000502639 PKD2Q13563 968 aa11.92□□□□□ -0.5
CDC42SE2-204ENST00000502639 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
CDC42SE2-204ENST00000502639 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.5
CDC42SE2-204ENST00000502639 PLSCR2Q9NRY7 297 aa11.9□□□□□ -0.5
CDC42SE2-204ENST00000502639 NPM1P06748 294 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDC42SE2-204ENST00000502639 MS4A3Q96HJ5 214 aa11.84□□□□□ -0.51
CDC42SE2-204ENST00000502639 RASEFQ8IZ41 740 aa11.83□□□□□ -0.52
CDC42SE2-204ENST00000502639 POTEJP0CG39 1038 aa11.79□□□□□ -0.52
CDC42SE2-204ENST00000502639 ATMINO43313 823 aaPredicted RBP11.78□□□□□ -0.52
CDC42SE2-204ENST00000502639 ASTLQ6HA08 431 aaPredicted RBP11.78□□□□□ -0.52
CDC42SE2-204ENST00000502639 CIZ1Q9ULV3 898 aaPredicted RBP11.78□□□□□ -0.52
CDC42SE2-204ENST00000502639 METRNQ9UJH8 293 aa11.76□□□□□ -0.53
CDC42SE2-204ENST00000502639 TSPYL2Q9H2G4 693 aaPredicted RBP11.75□□□□□ -0.53
CDC42SE2-204ENST00000502639 POTEMA6NI47 508 aa11.74□□□□□ -0.53
CDC42SE2-204ENST00000502639 DCAF8Q5TAQ9 597 aa11.73□□□□□ -0.53
CDC42SE2-204ENST00000502639 ECM2O94769 699 aaPredicted RBP11.72□□□□□ -0.53
CDC42SE2-204ENST00000502639 GSE1Q14687 1217 aa11.71□□□□□ -0.53
CDC42SE2-204ENST00000502639 CCDC61Q9Y6R9 512 aa11.71□□□□□ -0.53
CDC42SE2-204ENST00000502639 FAM212AQ96EL1 285 aa11.7□□□□□ -0.54
CDC42SE2-204ENST00000502639 ATN1P54259 1190 aaPredicted RBP11.69□□□□□ -0.54
CDC42SE2-204ENST00000502639 POTEGQ6S5H5 508 aa11.69□□□□□ -0.54
CDC42SE2-204ENST00000502639 SLC39A7Q92504 469 aa11.69□□□□□ -0.54
CDC42SE2-204ENST00000502639 RGL2O15211 777 aa11.68□□□□□ -0.54
CDC42SE2-204ENST00000502639 C7P10643 843 aa11.68□□□□□ -0.54
CDC42SE2-204ENST00000502639 TRPC6Q9Y210 931 aa11.67□□□□□ -0.54
CDC42SE2-204ENST00000502639 KIF12Q96FN5 646 aa11.65□□□□□ -0.54
CDC42SE2-204ENST00000502639 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
CDC42SE2-204ENST00000502639 RNF25Q96BH1 459 aaPredicted RBP11.63□□□□□ -0.55
CDC42SE2-204ENST00000502639 LCE2DQ5TA82 110 aaPredicted RBP11.62□□□□□ -0.55
CDC42SE2-204ENST00000502639 TRIM41Q8WV44 630 aa11.61□□□□□ -0.55
CDC42SE2-204ENST00000502639 BMP2KQ9NSY1 1161 aaPredicted RBP11.61□□□□□ -0.55
CDC42SE2-204ENST00000502639 PYGBP11216 843 aa11.6□□□□□ -0.55
CDC42SE2-204ENST00000502639 CHRM1P11229 460 aaPredicted RBP11.6□□□□□ -0.55
CDC42SE2-204ENST00000502639 MAP3K13O43283 966 aa11.58□□□□□ -0.56
CDC42SE2-204ENST00000502639 DCAF8L2P0C7V8 631 aa11.53□□□□□ -0.56
CDC42SE2-204ENST00000502639 MAMSTRQ6ZN01 415 aa11.53□□□□□ -0.56
CDC42SE2-204ENST00000502639 FAM163AQ96GL9 167 aaPredicted RBP11.52□□□□□ -0.57
CDC42SE2-204ENST00000502639 COLQQ9Y215 455 aaPredicted RBP11.5□□□□□ -0.57
CDC42SE2-204ENST00000502639 RIOK3O14730 519 aaKnown RBP11.49□□□□□ -0.57
CDC42SE2-204ENST00000502639 TIE1P35590 1138 aa11.49□□□□□ -0.57
CDC42SE2-204ENST00000502639 SCUBE2Q9NQ36 999 aa11.49□□□□□ -0.57
CDC42SE2-204ENST00000502639 TTLL13PA6NNM8 815 aa11.47□□□□□ -0.57
CDC42SE2-204ENST00000502639 PCDHB8Q9UN66 801 aa11.46□□□□□ -0.57
CDC42SE2-204ENST00000502639 PCDHB13Q9Y5F0 798 aa11.46□□□□□ -0.57
CDC42SE2-204ENST00000502639 PCDH10Q9P2E7 1040 aa11.44□□□□□ -0.58
CDC42SE2-204ENST00000502639 IFNL1Q8IU54 200 aa11.42□□□□□ -0.58
CDC42SE2-204ENST00000502639 CHGAP10645 457 aaKnown RBP11.41□□□□□ -0.58
CDC42SE2-204ENST00000502639 TRIM35Q9UPQ4 493 aa11.4□□□□□ -0.58
CDC42SE2-204ENST00000502639 VGFO15240 615 aaPredicted RBP11.39□□□□□ -0.59
CDC42SE2-204ENST00000502639 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE2-204ENST00000502639 SEC24BO95487 1268 aa11.38□□□□□ -0.59
CDC42SE2-204ENST00000502639 ZNF467Q7Z7K2 595 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE2-204ENST00000502639 HS6ST3Q8IZP7 471 aa11.38□□□□□ -0.59
CDC42SE2-204ENST00000502639 ZFP91Q96JP5 570 aaPredicted RBP11.38□□□□□ -0.59
CDC42SE2-204ENST00000502639 SGIP1Q9BQI5 828 aa11.38□□□□□ -0.59
CDC42SE2-204ENST00000502639 BBXQ8WY36 941 aaPredicted RBP11.33□□□□□ -0.6
CDC42SE2-204ENST00000502639 STK25O00506 426 aa11.32□□□□□ -0.6
CDC42SE2-204ENST00000502639 PDAP1Q13442 181 aaKnown RBP11.32□□□□□ -0.6
CDC42SE2-204ENST00000502639 BCL11BQ9C0K0 894 aaPredicted RBP11.32□□□□□ -0.6
CDC42SE2-204ENST00000502639 PSEN1P49768 467 aa11.31□□□□□ -0.6
CDC42SE2-204ENST00000502639 NKX1-1Q15270 411 aaPredicted RBP11.31□□□□□ -0.6
CDC42SE2-204ENST00000502639 IER5LQ5T953 404 aa11.31□□□□□ -0.6
CDC42SE2-204ENST00000502639 TAOK2Q9UL54 1235 aa11.31□□□□□ -0.6
CDC42SE2-204ENST00000502639 DNAJC5Q9H3Z4 198 aa11.3□□□□□ -0.6
CDC42SE2-204ENST00000502639 STK24Q9Y6E0 443 aa11.28□□□□□ -0.6
CDC42SE2-204ENST00000502639 TMEM106CQ9BVX2 250 aa11.27□□□□□ -0.61
CDC42SE2-204ENST00000502639 PLCB2Q00722 1185 aa11.26□□□□□ -0.61
CDC42SE2-204ENST00000502639 CDAN1Q8IWY9 1227 aa11.26□□□□□ -0.61
CDC42SE2-204ENST00000502639 SLAIN1Q8ND83 568 aa11.25□□□□□ -0.61
CDC42SE2-204ENST00000502639 ST18O60284 1047 aa11.23□□□□□ -0.61
CDC42SE2-204ENST00000502639 IRX5P78411 483 aaPredicted RBP11.22□□□□□ -0.61
CDC42SE2-204ENST00000502639 PAXIP1Q6ZW49 1069 aaPredicted RBP11.2□□□□□ -0.62
CDC42SE2-204ENST00000502639 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.2□□□□□ -0.62
CDC42SE2-204ENST00000502639 PLCG2P16885 1265 aa11.19□□□□□ -0.62
CDC42SE2-204ENST00000502639 GTPBP6O43824 516 aaPredicted RBP11.18□□□□□ -0.62
CDC42SE2-204ENST00000502639 SLC24A1O60721 1099 aa11.17□□□□□ -0.62
CDC42SE2-204ENST00000502639 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
CDC42SE2-204ENST00000502639 CFAP44Q96MT7 982 aa11.16□□□□□ -0.62
CDC42SE2-204ENST00000502639 EFCAB3Q8N7B9 438 aa11.15□□□□□ -0.62
CDC42SE2-204ENST00000502639 SPRYD3Q8NCJ5 442 aa11.15□□□□□ -0.62
CDC42SE2-204ENST00000502639 MFRPQ9BY79 579 aa11.13□□□□□ -0.63
CDC42SE2-204ENST00000502639 OCEL1Q9H607 264 aa11.11□□□□□ -0.63
CDC42SE2-204ENST00000502639 FBXO22Q8NEZ5 403 aa11.08□□□□□ -0.64
CDC42SE2-204ENST00000502639 PHF8Q9UPP1 1060 aa11.08□□□□□ -0.64
CDC42SE2-204ENST00000502639 HAP1P54257 671 aaPredicted RBP11.06□□□□□ -0.64
CDC42SE2-204ENST00000502639 TSHZ2Q9NRE2 1034 aa11.06□□□□□ -0.64
CDC42SE2-204ENST00000502639 SOX12O15370 315 aa11.05□□□□□ -0.64
CDC42SE2-204ENST00000502639 MS4A4AQ96JQ5 239 aa11.05□□□□□ -0.64
CDC42SE2-204ENST00000502639 MARVELD3Q96A59 401 aa11.03□□□□□ -0.64
CDC42SE2-204ENST00000502639 PPP1R37O75864 691 aa11.02□□□□□ -0.65
CDC42SE2-204ENST00000502639 ILDR1Q86SU0 546 aaPredicted RBP11.02□□□□□ -0.65
CDC42SE2-204ENST00000502639 PDCD7Q8N8D1 485 aaKnown RBP11.02□□□□□ -0.65
CDC42SE2-204ENST00000502639 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.02□□□□□ -0.65
CDC42SE2-204ENST00000502639 NLRP6P59044 892 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms