RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 PRKAR2AP13861 404 aaKnown RBP15.48■□□□□ 0.07
NEDD4-203ENST00000502612 FARP1Q9Y4F1 1045 aaPredicted RBP15.47■□□□□ 0.07
NEDD4-203ENST00000502612 FXR2P51116 673 aaKnown RBP eCLIP15.46■□□□□ 0.07
NEDD4-203ENST00000502612 HAP1P54257 671 aaPredicted RBP15.46■□□□□ 0.07
NEDD4-203ENST00000502612 CHRDL2Q6WN34 429 aa15.43■□□□□ 0.06
NEDD4-203ENST00000502612 PYGBP11216 843 aa15.42■□□□□ 0.06
NEDD4-203ENST00000502612 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.41■□□□□ 0.06
NEDD4-203ENST00000502612 RIOK3O14730 519 aaKnown RBP15.4■□□□□ 0.06
NEDD4-203ENST00000502612 PAXIP1Q6ZW49 1069 aaPredicted RBP15.4■□□□□ 0.06
NEDD4-203ENST00000502612 TSPYL2Q9H2G4 693 aaPredicted RBP15.4■□□□□ 0.06
NEDD4-203ENST00000502612 PIP4P2Q8N4L2 257 aa15.38■□□□□ 0.05
NEDD4-203ENST00000502612 CFAP44Q96MT7 982 aa15.38■□□□□ 0.05
NEDD4-203ENST00000502612 CHRM1P11229 460 aaPredicted RBP15.36■□□□□ 0.05
NEDD4-203ENST00000502612 HS6ST3Q8IZP7 471 aa15.36■□□□□ 0.05
NEDD4-203ENST00000502612 VGFO15240 615 aaPredicted RBP15.28■□□□□ 0.04
NEDD4-203ENST00000502612 SPRYD3Q8NCJ5 442 aa15.26■□□□□ 0.03
NEDD4-203ENST00000502612 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.24■□□□□ 0.03
NEDD4-203ENST00000502612 STK25O00506 426 aa15.24■□□□□ 0.03
NEDD4-203ENST00000502612 ZFP91Q96JP5 570 aaPredicted RBP15.24■□□□□ 0.03
NEDD4-203ENST00000502612 NKX1-1Q15270 411 aaPredicted RBP15.23■□□□□ 0.03
NEDD4-203ENST00000502612 CCDC61Q9Y6R9 512 aa15.23■□□□□ 0.03
NEDD4-203ENST00000502612 TAOK2Q9UL54 1235 aa15.22■□□□□ 0.03
NEDD4-203ENST00000502612 DNAJC5Q9H3Z4 198 aa15.19■□□□□ 0.02
NEDD4-203ENST00000502612 BCL11BQ9C0K0 894 aaPredicted RBP15.18■□□□□ 0.02
NEDD4-203ENST00000502612 TSHZ2Q9NRE2 1034 aa15.17■□□□□ 0.02
NEDD4-203ENST00000502612 PCDHB8Q9UN66 801 aa15.17■□□□□ 0.02
NEDD4-203ENST00000502612 PCDHB13Q9Y5F0 798 aa15.17■□□□□ 0.02
NEDD4-203ENST00000502612 STK24Q9Y6E0 443 aa15.17■□□□□ 0.02
NEDD4-203ENST00000502612 SGIP1Q9BQI5 828 aa15.16■□□□□ 0.02
NEDD4-203ENST00000502612 KDM2AQ9Y2K7 1162 aa15.14■□□□□ 0.01
NEDD4-203ENST00000502612 VSIG10Q8N0Z9 540 aa15.12■□□□□ 0.01
NEDD4-203ENST00000502612 PAK3O75914 559 aaPredicted RBP15.11■□□□□ 0.01
NEDD4-203ENST00000502612 ZNF467Q7Z7K2 595 aaPredicted RBP15.11■□□□□ 0.01
NEDD4-203ENST00000502612 GTPBP6O43824 516 aaPredicted RBP15.08■□□□□ 0
NEDD4-203ENST00000502612 MAP3K13O43283 966 aa15.06■□□□□ 0
NEDD4-203ENST00000502612 CD44P16070 742 aaKnown RBP15.06■□□□□ 0
NEDD4-203ENST00000502612 ZRANB1Q9UGI0 708 aa15.06■□□□□ 0
NEDD4-203ENST00000502612 IFNL1Q8IU54 200 aa15.05■□□□□ -0
NEDD4-203ENST00000502612 KIF12Q96FN5 646 aa15.05■□□□□ -0
NEDD4-203ENST00000502612 PDAP1Q13442 181 aaKnown RBP15.04■□□□□ -0
NEDD4-203ENST00000502612 ZNF579Q8NAF0 562 aaKnown RBP15.04■□□□□ -0
NEDD4-203ENST00000502612 PHF12Q96QT6 1004 aa15.03■□□□□ -0
NEDD4-203ENST00000502612 PSEN1P49768 467 aa15.01□□□□□ -0.01
NEDD4-203ENST00000502612 C19orf67A6NJJ6 358 aa14.92□□□□□ -0.02
NEDD4-203ENST00000502612 MFRPQ9BY79 579 aa14.85□□□□□ -0.03
NEDD4-203ENST00000502612 TRPC6Q9Y210 931 aa14.85□□□□□ -0.03
NEDD4-203ENST00000502612 MS4A3Q96HJ5 214 aa14.84□□□□□ -0.03
NEDD4-203ENST00000502612 CABP2Q9NPB3 220 aa14.84□□□□□ -0.03
NEDD4-203ENST00000502612 EFCAB3Q8N7B9 438 aa14.83□□□□□ -0.04
NEDD4-203ENST00000502612 RYDENQ9NUL5 291 aaKnown RBP14.81□□□□□ -0.04
NEDD4-203ENST00000502612 BCANQ96GW7 911 aa14.8□□□□□ -0.04
NEDD4-203ENST00000502612 EVX2Q03828 476 aa14.75□□□□□ -0.05
NEDD4-203ENST00000502612 PHF8Q9UPP1 1060 aa14.75□□□□□ -0.05
NEDD4-203ENST00000502612 CADPS2Q86UW7 1296 aa14.74□□□□□ -0.05
NEDD4-203ENST00000502612 FBXO22Q8NEZ5 403 aa14.74□□□□□ -0.05
NEDD4-203ENST00000502612 TMEM106CQ9BVX2 250 aa14.74□□□□□ -0.05
NEDD4-203ENST00000502612 PPP1R37O75864 691 aa14.73□□□□□ -0.05
NEDD4-203ENST00000502612 HAX1O00165 279 aa14.71□□□□□ -0.05
NEDD4-203ENST00000502612 GALR2O43603 387 aaPredicted RBP14.68□□□□□ -0.06
NEDD4-203ENST00000502612 SOX12O15370 315 aa14.67□□□□□ -0.06
NEDD4-203ENST00000502612 NLRP6P59044 892 aa14.67□□□□□ -0.06
NEDD4-203ENST00000502612 MS4A4AQ96JQ5 239 aa14.64□□□□□ -0.07
NEDD4-203ENST00000502612 TTLL13PA6NNM8 815 aa14.62□□□□□ -0.07
NEDD4-203ENST00000502612 BMP2KQ9NSY1 1161 aaPredicted RBP14.62□□□□□ -0.07
NEDD4-203ENST00000502612 GOLGA2Q08379 1002 aa14.61□□□□□ -0.07
NEDD4-203ENST00000502612 TIE1P35590 1138 aa14.6□□□□□ -0.07
NEDD4-203ENST00000502612 MKRN3Q13064 507 aaKnown RBP14.55□□□□□ -0.08
NEDD4-203ENST00000502612 PRKCSHP14314 528 aaPredicted RBP14.54□□□□□ -0.08
NEDD4-203ENST00000502612 TRIM35Q9UPQ4 493 aa14.52□□□□□ -0.09
NEDD4-203ENST00000502612 NBR1Q14596 966 aa14.5□□□□□ -0.09
NEDD4-203ENST00000502612 ATN1P54259 1190 aaPredicted RBP14.47□□□□□ -0.09
NEDD4-203ENST00000502612 WDR70Q9NW82 654 aa14.46□□□□□ -0.09
NEDD4-203ENST00000502612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.46□□□□□ -0.092e-6■■■■■ 28
NEDD4-203ENST00000502612 ILDR1Q86SU0 546 aaPredicted RBP14.45□□□□□ -0.1
NEDD4-203ENST00000502612 KCNV2Q8TDN2 545 aa14.45□□□□□ -0.1
NEDD4-203ENST00000502612 NCKAP5LQ9HCH0 1330 aa14.43□□□□□ -0.1
NEDD4-203ENST00000502612 ATMINO43313 823 aaPredicted RBP14.42□□□□□ -0.1
NEDD4-203ENST00000502612 TPRNQ4KMQ1 711 aa14.42□□□□□ -0.1
NEDD4-203ENST00000502612 DPY19L2Q6NUT2 758 aa14.42□□□□□ -0.1
NEDD4-203ENST00000502612 POTEHQ6S545 545 aa14.41□□□□□ -0.1
NEDD4-203ENST00000502612 GABBR2O75899 941 aa14.4□□□□□ -0.1
NEDD4-203ENST00000502612 CLCN6P51797 869 aa14.4□□□□□ -0.1
NEDD4-203ENST00000502612 ASTLQ6HA08 431 aaPredicted RBP14.39□□□□□ -0.11
NEDD4-203ENST00000502612 P3H3Q8IVL6 736 aa14.38□□□□□ -0.11
NEDD4-203ENST00000502612 PDCD7Q8N8D1 485 aaKnown RBP14.36□□□□□ -0.11
NEDD4-203ENST00000502612 LARP6Q9BRS8 491 aaKnown RBP14.35□□□□□ -0.11
NEDD4-203ENST00000502612 CRISPLD2Q9H0B8 497 aa14.34□□□□□ -0.11
NEDD4-203ENST00000502612 IRX5P78411 483 aaPredicted RBP14.33□□□□□ -0.12
NEDD4-203ENST00000502612 PELP1Q8IZL8 1130 aaKnown RBP14.3□□□□□ -0.12
NEDD4-203ENST00000502612 PDE4AP27815 886 aa14.29□□□□□ -0.12
NEDD4-203ENST00000502612 MFSD10Q14728 455 aa14.29□□□□□ -0.12
NEDD4-203ENST00000502612 E2F4Q16254 413 aa14.29□□□□□ -0.12
NEDD4-203ENST00000502612 MICALL2Q8IY33 904 aa14.27□□□□□ -0.13
NEDD4-203ENST00000502612 DDX27Q96GQ7 796 aaKnown RBP14.26□□□□□ -0.13
NEDD4-203ENST00000502612 IER5LQ5T953 404 aa14.25□□□□□ -0.13
NEDD4-203ENST00000502612 OCEL1Q9H607 264 aa14.25□□□□□ -0.13
NEDD4-203ENST00000502612 DCBLD2Q96PD2 775 aa14.23□□□□□ -0.13
NEDD4-203ENST00000502612 PLCG2P16885 1265 aa14.2□□□□□ -0.14
NEDD4-203ENST00000502612 ARHGEF1Q92888 912 aaKnown RBP14.2□□□□□ -0.14
NEDD4-203ENST00000502612 COLQQ9Y215 455 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms