RNA–Protein interactions for RNA: ENST00000502495.1

SCLT1-203, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 1,811 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-203ENST00000502495 METRNQ9UJH8 293 aa8.48□□□□□ -1.05
SCLT1-203ENST00000502495 ASTLQ6HA08 431 aaPredicted RBP8.47□□□□□ -1.05
SCLT1-203ENST00000502495 ATMINO43313 823 aaPredicted RBP8.44□□□□□ -1.06
SCLT1-203ENST00000502495 SPDYE4A6NLX3 237 aa8.43□□□□□ -1.06
SCLT1-203ENST00000502495 MS4A3Q96HJ5 214 aa8.43□□□□□ -1.06
SCLT1-203ENST00000502495 SCUBE2Q9NQ36 999 aa8.42□□□□□ -1.06
SCLT1-203ENST00000502495 MNX1P50219 401 aaPredicted RBP8.4□□□□□ -1.07
SCLT1-203ENST00000502495 FAM163AQ96GL9 167 aaPredicted RBP8.39□□□□□ -1.07
SCLT1-203ENST00000502495 POTEJP0CG39 1038 aa8.38□□□□□ -1.07
SCLT1-203ENST00000502495 LCE2DQ5TA82 110 aaPredicted RBP8.32□□□□□ -1.08
SCLT1-203ENST00000502495 ATN1P54259 1190 aaPredicted RBP8.31□□□□□ -1.08
SCLT1-203ENST00000502495 TSPYL2Q9H2G4 693 aaPredicted RBP8.31□□□□□ -1.08
SCLT1-203ENST00000502495 CCDC61Q9Y6R9 512 aa8.28□□□□□ -1.08
SCLT1-203ENST00000502495 KIF12Q96FN5 646 aa8.27□□□□□ -1.09
SCLT1-203ENST00000502495 BMP2KQ9NSY1 1161 aaPredicted RBP8.26□□□□□ -1.09
SCLT1-203ENST00000502495 TIE1P35590 1138 aa8.25□□□□□ -1.09
SCLT1-203ENST00000502495 SEC24BO95487 1268 aa8.24□□□□□ -1.09
SCLT1-203ENST00000502495 POTEFA5A3E0 1075 aa8.22□□□□□ -1.09
SCLT1-203ENST00000502495 CDAN1Q8IWY9 1227 aa8.22□□□□□ -1.09
SCLT1-203ENST00000502495 PLEKHG5O94827 1062 aa8.22□□□□□ -1.09
SCLT1-203ENST00000502495 MAP3K13O43283 966 aa8.19□□□□□ -1.1
SCLT1-203ENST00000502495 IER5LQ5T953 404 aa8.17□□□□□ -1.1
SCLT1-203ENST00000502495 TRPC6Q9Y210 931 aa8.17□□□□□ -1.1
SCLT1-203ENST00000502495 COLQQ9Y215 455 aaPredicted RBP8.16□□□□□ -1.1
SCLT1-203ENST00000502495 TTLL13PA6NNM8 815 aa8.15□□□□□ -1.1
SCLT1-203ENST00000502495 PROM2Q8N271 834 aa8.14□□□□□ -1.11
SCLT1-203ENST00000502495 SGIP1Q9BQI5 828 aa8.14□□□□□ -1.11
SCLT1-203ENST00000502495 SLAIN1Q8ND83 568 aa8.13□□□□□ -1.11
SCLT1-203ENST00000502495 MIER1Q8N108 512 aa8.11□□□□□ -1.11
SCLT1-203ENST00000502495 TRIM35Q9UPQ4 493 aa8.11□□□□□ -1.11
SCLT1-203ENST00000502495 RASEFQ8IZ41 740 aa8.1□□□□□ -1.11
SCLT1-203ENST00000502495 ST18O60284 1047 aa8.1□□□□□ -1.11
SCLT1-203ENST00000502495 PCDHB13Q9Y5F0 798 aa8.08□□□□□ -1.12
SCLT1-203ENST00000502495 PLCG2P16885 1265 aa8.07□□□□□ -1.12
SCLT1-203ENST00000502495 SNPHO15079 494 aa8.05□□□□□ -1.12
SCLT1-203ENST00000502495 TMEM121BQ9BXQ6 578 aaPredicted RBP8.05□□□□□ -1.12
SCLT1-203ENST00000502495 MMRN1Q13201 1228 aa8.04□□□□□ -1.12
SCLT1-203ENST00000502495 ZBTB47Q9UFB7 747 aaPredicted RBP8.03□□□□□ -1.12
SCLT1-203ENST00000502495 SPNS2Q8IVW8 549 aa8.03□□□□□ -1.12
SCLT1-203ENST00000502495 TMEM106CQ9BVX2 250 aa8.02□□□□□ -1.13
SCLT1-203ENST00000502495 PLCD3Q8N3E9 789 aa8.01□□□□□ -1.13
SCLT1-203ENST00000502495 IFNL1Q8IU54 200 aa7.99□□□□□ -1.13
SCLT1-203ENST00000502495 IRX5P78411 483 aaPredicted RBP7.97□□□□□ -1.13
SCLT1-203ENST00000502495 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.97□□□□□ -1.13
SCLT1-203ENST00000502495 FAM212AQ96EL1 285 aa7.96□□□□□ -1.13
SCLT1-203ENST00000502495 OCEL1Q9H607 264 aa7.96□□□□□ -1.13
SCLT1-203ENST00000502495 NUBP1P53384 320 aa7.95□□□□□ -1.14
SCLT1-203ENST00000502495 MARVELD3Q96A59 401 aa7.91□□□□□ -1.14
SCLT1-203ENST00000502495 EMP3P54852 163 aa7.87□□□□□ -1.15
SCLT1-203ENST00000502495 FKBP8Q14318 412 aa7.87□□□□□ -1.15
SCLT1-203ENST00000502495 C3orf67Q6ZVT6 689 aa7.86□□□□□ -1.15
SCLT1-203ENST00000502495 L3MBTL3Q96JM7 780 aaPredicted RBP7.85□□□□□ -1.15
SCLT1-203ENST00000502495 DCAF8Q5TAQ9 597 aa7.84□□□□□ -1.15
SCLT1-203ENST00000502495 GOLGA2Q08379 1002 aa7.81□□□□□ -1.16
SCLT1-203ENST00000502495 PYGBP11216 843 aa7.8□□□□□ -1.16
SCLT1-203ENST00000502495 HS3ST6Q96QI5 342 aa7.8□□□□□ -1.16
SCLT1-203ENST00000502495 FAM205CA6NFA0 338 aa7.79□□□□□ -1.16
SCLT1-203ENST00000502495 MKRN3Q13064 507 aaKnown RBP7.79□□□□□ -1.16
SCLT1-203ENST00000502495 PCDHB8Q9UN66 801 aa7.79□□□□□ -1.16
SCLT1-203ENST00000502495 KRTAP3-3Q9BYR6 98 aa7.78□□□□□ -1.16
SCLT1-203ENST00000502495 KRTAP3-2Q9BYR7 98 aa7.78□□□□□ -1.16
SCLT1-203ENST00000502495 PDCD7Q8N8D1 485 aaKnown RBP7.77□□□□□ -1.17
SCLT1-203ENST00000502495 ZNF467Q7Z7K2 595 aaPredicted RBP7.75□□□□□ -1.17
SCLT1-203ENST00000502495 POTEB3A0JP26 581 aa7.74□□□□□ -1.17
SCLT1-203ENST00000502495 POTEBQ6S5H4 581 aa7.74□□□□□ -1.17
SCLT1-203ENST00000502495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.73□□□□□ -1.17
SCLT1-203ENST00000502495 G3V3G9 751 aa7.71□□□□□ -1.18
SCLT1-203ENST00000502495 GSE1Q14687 1217 aa7.71□□□□□ -1.18
SCLT1-203ENST00000502495 ZNF710Q8N1W2 664 aa7.67□□□□□ -1.18
SCLT1-203ENST00000502495 PSEN1P49768 467 aa7.66□□□□□ -1.18
SCLT1-203ENST00000502495 RNF166Q96A37 237 aaPredicted RBP7.66□□□□□ -1.18
SCLT1-203ENST00000502495 ERBB3P21860 1342 aa7.66□□□□□ -1.18
SCLT1-203ENST00000502495 CHRM1P11229 460 aaPredicted RBP7.66□□□□□ -1.18
SCLT1-203ENST00000502495 HOXB1P14653 301 aaPredicted RBP7.66□□□□□ -1.18
SCLT1-203ENST00000502495 DOK7Q18PE1 504 aa7.65□□□□□ -1.18
SCLT1-203ENST00000502495 FBXO3Q9UK99 471 aa7.64□□□□□ -1.19
SCLT1-203ENST00000502495 HOXB3P14651 431 aaPredicted RBP7.64□□□□□ -1.19
SCLT1-203ENST00000502495 ILDR1Q86SU0 546 aaPredicted RBP7.64□□□□□ -1.19
SCLT1-203ENST00000502495 BOLA1Q9Y3E2 137 aa7.63□□□□□ -1.19
SCLT1-203ENST00000502495 RIMBP2O15034 1052 aa7.62□□□□□ -1.19
SCLT1-203ENST00000502495 KLHL34Q8N239 644 aa7.62□□□□□ -1.19
SCLT1-203ENST00000502495 PDAP1Q13442 181 aaKnown RBP7.61□□□□□ -1.19
SCLT1-203ENST00000502495 MYT1LQ9UL68 1186 aa7.61□□□□□ -1.19
SCLT1-203ENST00000502495 DPY19L2Q6NUT2 758 aa7.59□□□□□ -1.19
SCLT1-203ENST00000502495 PTGER2P43116 358 aa7.59□□□□□ -1.19
SCLT1-203ENST00000502495 VARS2Q5ST30 1063 aaKnown RBP7.56□□□□□ -1.2
SCLT1-203ENST00000502495 CABP2Q9NPB3 220 aa7.56□□□□□ -1.2
SCLT1-203ENST00000502495 ZSWIM6Q9HCJ5 1215 aa7.55□□□□□ -1.2
SCLT1-203ENST00000502495 ZNF687Q8N1G0 1237 aa7.54□□□□□ -1.2
SCLT1-203ENST00000502495 AMER1Q5JTC6 1135 aaPredicted RBP7.51□□□□□ -1.21
SCLT1-203ENST00000502495 RTN4Q9NQC3 1192 aaKnown RBP7.5□□□□□ -1.21
SCLT1-203ENST00000502495 VASPP50552 380 aaPredicted RBP7.5□□□□□ -1.21
SCLT1-203ENST00000502495 ANKRD13DQ6ZTN6 518 aa7.45□□□□□ -1.22
SCLT1-203ENST00000502495 GPR153Q6NV75 609 aa7.44□□□□□ -1.22
SCLT1-203ENST00000502495 CIZ1Q9ULV3 898 aaPredicted RBP7.44□□□□□ -1.22
SCLT1-203ENST00000502495 MICALL2Q8IY33 904 aa7.42□□□□□ -1.22
SCLT1-203ENST00000502495 SPOCK2Q92563 424 aa7.42□□□□□ -1.22
SCLT1-203ENST00000502495 EFCAB3Q8N7B9 438 aa7.41□□□□□ -1.22
SCLT1-203ENST00000502495 LSM11P83369 360 aaKnown RBP eCLIP7.39□□□□□ -1.23
SCLT1-203ENST00000502495 TMEM92Q6UXU6 159 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms