RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 ABCB7O75027 752 aa6.01□□□□□ -1.45
SUB1-202ENST00000502453 RNF39Q9H2S5 420 aa6.01□□□□□ -1.45
SUB1-202ENST00000502453 PLEKHG5O94827 1062 aa6.01□□□□□ -1.45
SUB1-202ENST00000502453 RSPH6AQ9H0K4 717 aa6□□□□□ -1.45
SUB1-202ENST00000502453 PDIA4P13667 645 aaKnown RBP5.99□□□□□ -1.45
SUB1-202ENST00000502453 LMOD2Q6P5Q4 547 aa5.99□□□□□ -1.45
SUB1-202ENST00000502453 SPOCK2Q92563 424 aa5.99□□□□□ -1.45
SUB1-202ENST00000502453 ZMYND15Q9H091 742 aa5.99□□□□□ -1.45
SUB1-202ENST00000502453 ARID3CA6NKF2 412 aa5.98□□□□□ -1.45
SUB1-202ENST00000502453 CAPN15O75808 1086 aa5.98□□□□□ -1.45
SUB1-202ENST00000502453 CDK11BP21127 795 aaKnown RBP5.97□□□□□ -1.45
SUB1-202ENST00000502453 CDK11AQ9UQ88 783 aaPredicted RBP5.97□□□□□ -1.45
SUB1-202ENST00000502453 IGSF3O75054 1194 aa5.96□□□□□ -1.45
SUB1-202ENST00000502453 PROM2Q8N271 834 aa5.96□□□□□ -1.46
SUB1-202ENST00000502453 NECTIN2Q92692 538 aa5.95□□□□□ -1.46
SUB1-202ENST00000502453 C1orf115Q9H7X2 142 aa5.94□□□□□ -1.46
SUB1-202ENST00000502453 SHROOM4Q9ULL8 1493 aa5.93□□□□□ -1.46
SUB1-202ENST00000502453 APBB1O00213 710 aa5.92□□□□□ -1.46
SUB1-202ENST00000502453 POTEDQ86YR6 584 aa5.92□□□□□ -1.46
SUB1-202ENST00000502453 CIZ1Q9ULV3 898 aaPredicted RBP5.92□□□□□ -1.46
SUB1-202ENST00000502453 SLC24A3Q9HC58 644 aa5.91□□□□□ -1.46
SUB1-202ENST00000502453 KCTD17Q8N5Z5 321 aa5.91□□□□□ -1.46
SUB1-202ENST00000502453 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.91□□□□□ -1.46
SUB1-202ENST00000502453 RAD21O60216 631 aa5.91□□□□□ -1.46
SUB1-202ENST00000502453 OSCARQ8IYS5 282 aa5.87□□□□□ -1.47
SUB1-202ENST00000502453 HMGB1P09429 215 aaKnown RBP5.87□□□□□ -1.47
SUB1-202ENST00000502453 AEBP1Q8IUX7 1158 aa5.86□□□□□ -1.47
SUB1-202ENST00000502453 TRIM41Q8WV44 630 aa5.86□□□□□ -1.47
SUB1-202ENST00000502453 CHMP4AQ9BY43 222 aa5.86□□□□□ -1.47
SUB1-202ENST00000502453 RBM25P49756 843 aaKnown RBP5.86□□□□□ -1.47
SUB1-202ENST00000502453 HSP90B1P14625 803 aaKnown RBP5.85□□□□□ -1.47
SUB1-202ENST00000502453 DSG3P32926 999 aa5.85□□□□□ -1.47
SUB1-202ENST00000502453 ZNF428Q96B54 188 aa5.85□□□□□ -1.47
SUB1-202ENST00000502453 IL27Q8NEV9 243 aa5.85□□□□□ -1.47
SUB1-202ENST00000502453 PLCD3Q8N3E9 789 aa5.84□□□□□ -1.47
SUB1-202ENST00000502453 P3H3Q8IVL6 736 aa5.84□□□□□ -1.47
SUB1-202ENST00000502453 ZC3H15Q8WU90 426 aaKnown RBP5.84□□□□□ -1.47
SUB1-202ENST00000502453 HS6ST3Q8IZP7 471 aa5.84□□□□□ -1.48
SUB1-202ENST00000502453 NKX1-1Q15270 411 aaPredicted RBP5.83□□□□□ -1.48
SUB1-202ENST00000502453 FOXD4L5Q5VV16 416 aaPredicted RBP5.83□□□□□ -1.48
SUB1-202ENST00000502453 FOXD4L4Q8WXT5 416 aaPredicted RBP5.83□□□□□ -1.48
SUB1-202ENST00000502453 MTMR7Q9Y216 660 aa5.82□□□□□ -1.48
SUB1-202ENST00000502453 C1QBPQ07021 282 aaKnown RBP5.82□□□□□ -1.48
SUB1-202ENST00000502453 GPBP1L1Q9HC44 474 aaPredicted RBP5.81□□□□□ -1.48
SUB1-202ENST00000502453 GTPBP6O43824 516 aaPredicted RBP5.81□□□□□ -1.48
SUB1-202ENST00000502453 KCNV2Q8TDN2 545 aa5.81□□□□□ -1.48
SUB1-202ENST00000502453 WDR70Q9NW82 654 aa5.81□□□□□ -1.48
SUB1-202ENST00000502453 POLR3GLQ9BT43 218 aa5.8□□□□□ -1.48
SUB1-202ENST00000502453 BCL11AQ9H165 835 aa5.8□□□□□ -1.48
SUB1-202ENST00000502453 CCDC82Q8N4S0 544 aa5.79□□□□□ -1.48
SUB1-202ENST00000502453 USP35Q9P2H5 1018 aa5.78□□□□□ -1.48
SUB1-202ENST00000502453 MKRN3Q13064 507 aaKnown RBP5.77□□□□□ -1.49
SUB1-202ENST00000502453 TMCO4Q5TGY1 634 aa5.77□□□□□ -1.49
SUB1-202ENST00000502453 ZNF692Q9BU19 519 aaPredicted RBP5.77□□□□□ -1.49
SUB1-202ENST00000502453 MIER1Q8N108 512 aa5.76□□□□□ -1.49
SUB1-202ENST00000502453 PABPN1Q86U42 306 aaKnown RBP eCLIP5.75□□□□□ -1.49
SUB1-202ENST00000502453 DHX37Q8IY37 1157 aaKnown RBP5.74□□□□□ -1.49
SUB1-202ENST00000502453 RGS22Q8NE09 1264 aa5.74□□□□□ -1.49
SUB1-202ENST00000502453 STK25O00506 426 aa5.74□□□□□ -1.49
SUB1-202ENST00000502453 GZF1Q9H116 711 aaPredicted RBP5.74□□□□□ -1.49
SUB1-202ENST00000502453 MFAP1P55081 439 aaKnown RBP5.73□□□□□ -1.49
SUB1-202ENST00000502453 PUS7Q96PZ0 661 aaKnown RBP5.73□□□□□ -1.49
SUB1-202ENST00000502453 RNF25Q96BH1 459 aaPredicted RBP5.73□□□□□ -1.49
SUB1-202ENST00000502453 SSUH2Q9Y2M2 353 aa5.73□□□□□ -1.49
SUB1-202ENST00000502453 FAM9AQ8IZU1 332 aaPredicted RBP5.71□□□□□ -1.5
SUB1-202ENST00000502453 MYT1LQ9UL68 1186 aa5.71□□□□□ -1.5
SUB1-202ENST00000502453 E9PSI1 815 aa5.7□□□□□ -1.5
SUB1-202ENST00000502453 SEMA3EO15041 775 aa5.7□□□□□ -1.5
SUB1-202ENST00000502453 CLUAP1Q96AJ1 413 aa5.69□□□□□ -1.5
SUB1-202ENST00000502453 KDM4CQ9H3R0 1056 aa5.68□□□□□ -1.5
SUB1-202ENST00000502453 FBXW7Q969H0 707 aa5.68□□□□□ -1.5
SUB1-202ENST00000502453 UBE2Q2Q8WVN8 375 aa5.68□□□□□ -1.5
SUB1-202ENST00000502453 KRI1Q8N9T8 703 aaKnown RBP5.67□□□□□ -1.5
SUB1-202ENST00000502453 ZMYND10O75800 440 aa5.66□□□□□ -1.5
SUB1-202ENST00000502453 ZNF777Q9ULD5 760 aaPredicted RBP5.65□□□□□ -1.5
SUB1-202ENST00000502453 SPDYE2BA6NHP3 402 aa5.65□□□□□ -1.51
SUB1-202ENST00000502453 SPDYE6P0CI01 402 aa5.65□□□□□ -1.51
SUB1-202ENST00000502453 SPDYE2Q495Y8 402 aa5.65□□□□□ -1.51
SUB1-202ENST00000502453 CADPS2Q86UW7 1296 aa5.65□□□□□ -1.51
SUB1-202ENST00000502453 TRAIPQ9BWF2 469 aa5.65□□□□□ -1.51
SUB1-202ENST00000502453 ZBTB12Q9Y330 459 aaPredicted RBP5.65□□□□□ -1.51
SUB1-202ENST00000502453 BRD2P25440 801 aaKnown RBP5.64□□□□□ -1.51
SUB1-202ENST00000502453 STK24Q9Y6E0 443 aa5.64□□□□□ -1.51
SUB1-202ENST00000502453 ZNF316A6NFI3 1004 aaPredicted RBP5.63□□□□□ -1.51
SUB1-202ENST00000502453 PPM1GO15355 546 aaPredicted RBP5.63□□□□□ -1.51
SUB1-202ENST00000502453 RIOK3O14730 519 aaKnown RBP5.62□□□□□ -1.51
SUB1-202ENST00000502453 RETREG2Q8NC44 543 aa5.62□□□□□ -1.51
SUB1-202ENST00000502453 TRAK2O60296 914 aa5.62□□□□□ -1.51
SUB1-202ENST00000502453 AK7Q96M32 723 aa5.62□□□□□ -1.51
SUB1-202ENST00000502453 CCDC97Q96F63 343 aaPredicted RBP5.62□□□□□ -1.51
SUB1-202ENST00000502453 FLIIQ13045 1269 aa5.61□□□□□ -1.51
SUB1-202ENST00000502453 FAM177A1Q8N128 213 aaPredicted RBP5.61□□□□□ -1.51
SUB1-202ENST00000502453 BCL11BQ9C0K0 894 aaPredicted RBP5.61□□□□□ -1.51
SUB1-202ENST00000502453 FAM117AQ9C073 453 aa5.61□□□□□ -1.51
SUB1-202ENST00000502453 STAG3Q9UJ98 1225 aa5.61□□□□□ -1.51
SUB1-202ENST00000502453 CACNB1Q02641 598 aaPredicted RBP5.61□□□□□ -1.51
SUB1-202ENST00000502453 BARGINQ6ZT62 677 aa5.6□□□□□ -1.51
SUB1-202ENST00000502453 TESPA1A2RU30 521 aaPredicted RBP5.59□□□□□ -1.51
SUB1-202ENST00000502453 RYDENQ9NUL5 291 aaKnown RBP5.59□□□□□ -1.51
SUB1-202ENST00000502453 IRF5Q13568 498 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms