RNA–Protein interactions for RNA: ENST00000498517.5

ARHGEF3-215, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene ARHGEF3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-215ENST00000498517 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
ARHGEF3-215ENST00000498517 MIER1Q8N108 512 aa11.03□□□□□ -0.64
ARHGEF3-215ENST00000498517 TRPC6Q9Y210 931 aa10.98□□□□□ -0.65
ARHGEF3-215ENST00000498517 KIF12Q96FN5 646 aa10.97□□□□□ -0.65
ARHGEF3-215ENST00000498517 ATMINO43313 823 aaPredicted RBP10.96□□□□□ -0.65
ARHGEF3-215ENST00000498517 ASTLQ6HA08 431 aaPredicted RBP10.96□□□□□ -0.65
ARHGEF3-215ENST00000498517 OTUD5Q96G74 571 aa10.94□□□□□ -0.66
ARHGEF3-215ENST00000498517 PLCD3Q8N3E9 789 aa10.93□□□□□ -0.66
ARHGEF3-215ENST00000498517 MAP3K13O43283 966 aa10.92□□□□□ -0.66
ARHGEF3-215ENST00000498517 NUBP1P53384 320 aa10.91□□□□□ -0.66
ARHGEF3-215ENST00000498517 POTEJP0CG39 1038 aa10.9□□□□□ -0.66
ARHGEF3-215ENST00000498517 ATN1P54259 1190 aaPredicted RBP10.9□□□□□ -0.66
ARHGEF3-215ENST00000498517 PLEKHG5O94827 1062 aa10.88□□□□□ -0.67
ARHGEF3-215ENST00000498517 BMP2KQ9NSY1 1161 aaPredicted RBP10.88□□□□□ -0.67
ARHGEF3-215ENST00000498517 METRNQ9UJH8 293 aa10.88□□□□□ -0.67
ARHGEF3-215ENST00000498517 CCDC180Q9P1Z9 1646 aa10.86□□□□□ -0.67
ARHGEF3-215ENST00000498517 POTEFA5A3E0 1075 aa10.84□□□□□ -0.67
ARHGEF3-215ENST00000498517 SLC39A7Q92504 469 aa10.82□□□□□ -0.68
ARHGEF3-215ENST00000498517 C7P10643 843 aa10.8□□□□□ -0.68
ARHGEF3-215ENST00000498517 TTLL13PA6NNM8 815 aa10.78□□□□□ -0.68
ARHGEF3-215ENST00000498517 TIE1P35590 1138 aa10.77□□□□□ -0.69
ARHGEF3-215ENST00000498517 IFNL1Q8IU54 200 aa10.76□□□□□ -0.69
ARHGEF3-215ENST00000498517 PCDHB13Q9Y5F0 798 aa10.76□□□□□ -0.69
ARHGEF3-215ENST00000498517 ZBTB47Q9UFB7 747 aaPredicted RBP10.75□□□□□ -0.69
ARHGEF3-215ENST00000498517 COLQQ9Y215 455 aaPredicted RBP10.73□□□□□ -0.69
ARHGEF3-215ENST00000498517 FAM212AQ96EL1 285 aa10.72□□□□□ -0.69
ARHGEF3-215ENST00000498517 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.69
ARHGEF3-215ENST00000498517 VASPP50552 380 aaPredicted RBP10.69□□□□□ -0.7
ARHGEF3-215ENST00000498517 TRIM35Q9UPQ4 493 aa10.69□□□□□ -0.7
ARHGEF3-215ENST00000498517 FBXO3Q9UK99 471 aa10.68□□□□□ -0.7
ARHGEF3-215ENST00000498517 PYGBP11216 843 aa10.67□□□□□ -0.7
ARHGEF3-215ENST00000498517 DCAF8Q5TAQ9 597 aa10.65□□□□□ -0.7
ARHGEF3-215ENST00000498517 LCE2DQ5TA82 110 aaPredicted RBP10.64□□□□□ -0.71
ARHGEF3-215ENST00000498517 TMEM106CQ9BVX2 250 aa10.63□□□□□ -0.71
ARHGEF3-215ENST00000498517 PCDHB8Q9UN66 801 aa10.62□□□□□ -0.71
ARHGEF3-215ENST00000498517 POTEMA6NI47 508 aa10.59□□□□□ -0.71
ARHGEF3-215ENST00000498517 SEC24BO95487 1268 aa10.58□□□□□ -0.72
ARHGEF3-215ENST00000498517 IER5LQ5T953 404 aa10.58□□□□□ -0.72
ARHGEF3-215ENST00000498517 MAMSTRQ6ZN01 415 aa10.58□□□□□ -0.72
ARHGEF3-215ENST00000498517 KLHL34Q8N239 644 aa10.57□□□□□ -0.72
ARHGEF3-215ENST00000498517 SCUBE2Q9NQ36 999 aa10.57□□□□□ -0.72
ARHGEF3-215ENST00000498517 POTEGQ6S5H5 508 aa10.56□□□□□ -0.72
ARHGEF3-215ENST00000498517 IFNLR1Q8IU57 520 aaPredicted RBP10.56□□□□□ -0.72
ARHGEF3-215ENST00000498517 IRX5P78411 483 aaPredicted RBP10.55□□□□□ -0.72
ARHGEF3-215ENST00000498517 FAM163AQ96GL9 167 aaPredicted RBP10.49□□□□□ -0.73
ARHGEF3-215ENST00000498517 PLSCR2Q9NRY7 297 aa10.49□□□□□ -0.73
ARHGEF3-215ENST00000498517 GSE1Q14687 1217 aa10.48□□□□□ -0.73
ARHGEF3-215ENST00000498517 PLCG2P16885 1265 aa10.47□□□□□ -0.73
ARHGEF3-215ENST00000498517 DCAF8L2P0C7V8 631 aa10.46□□□□□ -0.73
ARHGEF3-215ENST00000498517 CHRM1P11229 460 aaPredicted RBP10.45□□□□□ -0.74
ARHGEF3-215ENST00000498517 OCEL1Q9H607 264 aa10.43□□□□□ -0.74
ARHGEF3-215ENST00000498517 PDCD7Q8N8D1 485 aaKnown RBP10.42□□□□□ -0.74
ARHGEF3-215ENST00000498517 SPOCK2Q92563 424 aa10.42□□□□□ -0.74
ARHGEF3-215ENST00000498517 ABCC9O60706 1549 aa10.42□□□□□ -0.74
ARHGEF3-215ENST00000498517 ZNF467Q7Z7K2 595 aaPredicted RBP10.41□□□□□ -0.74
ARHGEF3-215ENST00000498517 SLAIN1Q8ND83 568 aa10.41□□□□□ -0.74
ARHGEF3-215ENST00000498517 PSEN1P49768 467 aa10.4□□□□□ -0.74
ARHGEF3-215ENST00000498517 CIZ1Q9ULV3 898 aaPredicted RBP10.38□□□□□ -0.75
ARHGEF3-215ENST00000498517 ST18O60284 1047 aa10.33□□□□□ -0.76
ARHGEF3-215ENST00000498517 ZCCHC6Q5VYS8 1495 aaKnown RBP10.33□□□□□ -0.76
ARHGEF3-215ENST00000498517 ILDR1Q86SU0 546 aaPredicted RBP10.32□□□□□ -0.76
ARHGEF3-215ENST00000498517 PDAP1Q13442 181 aaKnown RBP10.31□□□□□ -0.76
ARHGEF3-215ENST00000498517 MKRN3Q13064 507 aaKnown RBP10.3□□□□□ -0.76
ARHGEF3-215ENST00000498517 DPY19L2Q6NUT2 758 aa10.3□□□□□ -0.76
ARHGEF3-215ENST00000498517 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.3□□□□□ -0.76
ARHGEF3-215ENST00000498517 GOLGA2Q08379 1002 aa10.28□□□□□ -0.76
ARHGEF3-215ENST00000498517 CABP2Q9NPB3 220 aa10.28□□□□□ -0.76
ARHGEF3-215ENST00000498517 PCDH10Q9P2E7 1040 aa10.27□□□□□ -0.77
ARHGEF3-215ENST00000498517 DNAJC5Q9H3Z4 198 aa10.26□□□□□ -0.77
ARHGEF3-215ENST00000498517 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.26□□□□□ -0.77
ARHGEF3-215ENST00000498517 RNF25Q96BH1 459 aaPredicted RBP10.24□□□□□ -0.77
ARHGEF3-215ENST00000498517 DCAF1Q9Y4B6 1507 aa10.23□□□□□ -0.77
ARHGEF3-215ENST00000498517 CDAN1Q8IWY9 1227 aa10.23□□□□□ -0.77
ARHGEF3-215ENST00000498517 L3MBTL3Q96JM7 780 aaPredicted RBP10.2□□□□□ -0.78
ARHGEF3-215ENST00000498517 C3orf67Q6ZVT6 689 aa10.19□□□□□ -0.78
ARHGEF3-215ENST00000498517 MARVELD3Q96A59 401 aa10.19□□□□□ -0.78
ARHGEF3-215ENST00000498517 NACADO15069 1562 aa10.18□□□□□ -0.78
ARHGEF3-215ENST00000498517 EFCAB3Q8N7B9 438 aa10.18□□□□□ -0.78
ARHGEF3-215ENST00000498517 MYO15BQ96JP2 1530 aa10.16□□□□□ -0.78
ARHGEF3-215ENST00000498517 RB1CC1Q8TDY2 1594 aa10.14□□□□□ -0.79
ARHGEF3-215ENST00000498517 TRIM41Q8WV44 630 aa10.14□□□□□ -0.79
ARHGEF3-215ENST00000498517 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
ARHGEF3-215ENST00000498517 TMEM121BQ9BXQ6 578 aaPredicted RBP10.13□□□□□ -0.79
ARHGEF3-215ENST00000498517 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.12□□□□□ -0.79
ARHGEF3-215ENST00000498517 POTEB3A0JP26 581 aa10.12□□□□□ -0.79
ARHGEF3-215ENST00000498517 POTEBQ6S5H4 581 aa10.12□□□□□ -0.79
ARHGEF3-215ENST00000498517 ZFP91Q96JP5 570 aaPredicted RBP10.12□□□□□ -0.79
ARHGEF3-215ENST00000498517 RIOK3O14730 519 aaKnown RBP10.11□□□□□ -0.79
ARHGEF3-215ENST00000498517 SNPHO15079 494 aa10.11□□□□□ -0.79
ARHGEF3-215ENST00000498517 MS4A4AQ96JQ5 239 aa10.1□□□□□ -0.79
ARHGEF3-215ENST00000498517 HOXB3P14651 431 aaPredicted RBP10.09□□□□□ -0.79
ARHGEF3-215ENST00000498517 TMEM92Q6UXU6 159 aa10.08□□□□□ -0.8
ARHGEF3-215ENST00000498517 PHF8Q9UPP1 1060 aa10.05□□□□□ -0.8
ARHGEF3-215ENST00000498517 SHROOM4Q9ULL8 1493 aa10.04□□□□□ -0.8
ARHGEF3-215ENST00000498517 VGFO15240 615 aaPredicted RBP10.04□□□□□ -0.8
ARHGEF3-215ENST00000498517 EMP3P54852 163 aa10.04□□□□□ -0.8
ARHGEF3-215ENST00000498517 MICALL2Q8IY33 904 aa10.03□□□□□ -0.8
ARHGEF3-215ENST00000498517 HS3ST6Q96QI5 342 aa10.02□□□□□ -0.81
ARHGEF3-215ENST00000498517 G3V3G9 751 aa10.01□□□□□ -0.81
ARHGEF3-215ENST00000498517 FAM205CA6NFA0 338 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms