RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 ZNF579Q8NAF0 562 aaKnown RBP8.74□□□□□ -1.01
CALD1-224ENST00000498254 FBXO3Q9UK99 471 aa8.74□□□□□ -1.01
CALD1-224ENST00000498254 STAG3Q9UJ98 1225 aa8.72□□□□□ -1.01
CALD1-224ENST00000498254 CREBZFQ9NS37 354 aa8.7□□□□□ -1.02
CALD1-224ENST00000498254 ZRANB1Q9UGI0 708 aa8.7□□□□□ -1.02
CALD1-224ENST00000498254 GALR2O43603 387 aaPredicted RBP8.69□□□□□ -1.02
CALD1-224ENST00000498254 METRNQ9UJH8 293 aa8.69□□□□□ -1.02
CALD1-224ENST00000498254 POTEJP0CG39 1038 aa8.68□□□□□ -1.02
CALD1-224ENST00000498254 VASPP50552 380 aaPredicted RBP8.67□□□□□ -1.02
CALD1-224ENST00000498254 C7P10643 843 aa8.64□□□□□ -1.03
CALD1-224ENST00000498254 PROM2Q8N271 834 aa8.64□□□□□ -1.03
CALD1-224ENST00000498254 SLC39A7Q92504 469 aa8.64□□□□□ -1.03
CALD1-224ENST00000498254 DCAF8L2P0C7V8 631 aa8.61□□□□□ -1.03
CALD1-224ENST00000498254 PELP1Q8IZL8 1130 aaKnown RBP8.6□□□□□ -1.03
CALD1-224ENST00000498254 PAK3O75914 559 aaPredicted RBP8.59□□□□□ -1.03
CALD1-224ENST00000498254 IFNLR1Q8IU57 520 aaPredicted RBP8.59□□□□□ -1.03
CALD1-224ENST00000498254 NPM1P06748 294 aaKnown RBP eCLIP8.56□□□□□ -1.04
CALD1-224ENST00000498254 PHF12Q96QT6 1004 aa8.55□□□□□ -1.04
CALD1-224ENST00000498254 MNX1P50219 401 aaPredicted RBP8.52□□□□□ -1.05
CALD1-224ENST00000498254 ST18O60284 1047 aa8.51□□□□□ -1.05
CALD1-224ENST00000498254 PLCB2Q00722 1185 aa8.5□□□□□ -1.05
CALD1-224ENST00000498254 HAP1P54257 671 aaPredicted RBP8.47□□□□□ -1.05
CALD1-224ENST00000498254 PKD2Q13563 968 aa8.47□□□□□ -1.05
CALD1-224ENST00000498254 KLHL34Q8N239 644 aa8.46□□□□□ -1.06
CALD1-224ENST00000498254 ASTLQ6HA08 431 aaPredicted RBP8.44□□□□□ -1.06
CALD1-224ENST00000498254 MS4A3Q96HJ5 214 aa8.42□□□□□ -1.06
CALD1-224ENST00000498254 ATMINO43313 823 aaPredicted RBP8.4□□□□□ -1.06
CALD1-224ENST00000498254 SPOCK2Q92563 424 aa8.39□□□□□ -1.07
CALD1-224ENST00000498254 TMEM121BQ9BXQ6 578 aaPredicted RBP8.39□□□□□ -1.07
CALD1-224ENST00000498254 PLCD3Q8N3E9 789 aa8.38□□□□□ -1.07
CALD1-224ENST00000498254 ECM2O94769 699 aaPredicted RBP8.37□□□□□ -1.07
CALD1-224ENST00000498254 TSPYL2Q9H2G4 693 aaPredicted RBP8.37□□□□□ -1.07
CALD1-224ENST00000498254 CCDC61Q9Y6R9 512 aa8.35□□□□□ -1.07
CALD1-224ENST00000498254 MIER1Q8N108 512 aa8.33□□□□□ -1.08
CALD1-224ENST00000498254 KIF12Q96FN5 646 aa8.32□□□□□ -1.08
CALD1-224ENST00000498254 ATN1P54259 1190 aaPredicted RBP8.31□□□□□ -1.08
CALD1-224ENST00000498254 RGL2O15211 777 aa8.28□□□□□ -1.08
CALD1-224ENST00000498254 PLEKHG5O94827 1062 aa8.28□□□□□ -1.08
CALD1-224ENST00000498254 CFAP44Q96MT7 982 aa8.28□□□□□ -1.08
CALD1-224ENST00000498254 PAXIP1Q6ZW49 1069 aaPredicted RBP8.27□□□□□ -1.09
CALD1-224ENST00000498254 SLAIN1Q8ND83 568 aa8.27□□□□□ -1.09
CALD1-224ENST00000498254 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.27□□□□□ -1.09
CALD1-224ENST00000498254 BMP2KQ9NSY1 1161 aaPredicted RBP8.26□□□□□ -1.09
CALD1-224ENST00000498254 CIZ1Q9ULV3 898 aaPredicted RBP8.26□□□□□ -1.09
CALD1-224ENST00000498254 MAP3K13O43283 966 aa8.25□□□□□ -1.09
CALD1-224ENST00000498254 BBXQ8WY36 941 aaPredicted RBP8.25□□□□□ -1.09
CALD1-224ENST00000498254 TIE1P35590 1138 aa8.24□□□□□ -1.09
CALD1-224ENST00000498254 RASEFQ8IZ41 740 aa8.24□□□□□ -1.09
CALD1-224ENST00000498254 TRPC6Q9Y210 931 aa8.24□□□□□ -1.09
CALD1-224ENST00000498254 POTEFA5A3E0 1075 aa8.23□□□□□ -1.09
CALD1-224ENST00000498254 RNF166Q96A37 237 aaPredicted RBP8.23□□□□□ -1.09
CALD1-224ENST00000498254 VSIG10Q8N0Z9 540 aa8.22□□□□□ -1.09
CALD1-224ENST00000498254 MARVELD3Q96A59 401 aa8.22□□□□□ -1.09
CALD1-224ENST00000498254 BCANQ96GW7 911 aa8.21□□□□□ -1.1
CALD1-224ENST00000498254 TTLL13PA6NNM8 815 aa8.18□□□□□ -1.1
CALD1-224ENST00000498254 SEC24BO95487 1268 aa8.18□□□□□ -1.1
CALD1-224ENST00000498254 CHGAP10645 457 aaKnown RBP8.18□□□□□ -1.1
CALD1-224ENST00000498254 PRKCSHP14314 528 aaPredicted RBP8.18□□□□□ -1.1
CALD1-224ENST00000498254 KRTAP3-3Q9BYR6 98 aa8.18□□□□□ -1.1
CALD1-224ENST00000498254 KRTAP3-2Q9BYR7 98 aa8.18□□□□□ -1.1
CALD1-224ENST00000498254 KDM2AQ9Y2K7 1162 aa8.18□□□□□ -1.1
CALD1-224ENST00000498254 SNPHO15079 494 aa8.17□□□□□ -1.1
CALD1-224ENST00000498254 SGIP1Q9BQI5 828 aa8.17□□□□□ -1.1
CALD1-224ENST00000498254 COLQQ9Y215 455 aaPredicted RBP8.17□□□□□ -1.1
CALD1-224ENST00000498254 ZBTB47Q9UFB7 747 aaPredicted RBP8.16□□□□□ -1.1
CALD1-224ENST00000498254 IER5LQ5T953 404 aa8.14□□□□□ -1.11
CALD1-224ENST00000498254 SPRYD3Q8NCJ5 442 aa8.14□□□□□ -1.11
CALD1-224ENST00000498254 PCDHB13Q9Y5F0 798 aa8.14□□□□□ -1.11
CALD1-224ENST00000498254 TSHZ2Q9NRE2 1034 aa8.13□□□□□ -1.11
CALD1-224ENST00000498254 TRIM35Q9UPQ4 493 aa8.13□□□□□ -1.11
CALD1-224ENST00000498254 NUBP1P53384 320 aa8.12□□□□□ -1.11
CALD1-224ENST00000498254 EMP3P54852 163 aa8.11□□□□□ -1.11
CALD1-224ENST00000498254 TAOK2Q9UL54 1235 aa8.11□□□□□ -1.11
CALD1-224ENST00000498254 IFNL1Q8IU54 200 aa8.09□□□□□ -1.11
CALD1-224ENST00000498254 FAM212AQ96EL1 285 aa8.07□□□□□ -1.12
CALD1-224ENST00000498254 RNF25Q96BH1 459 aaPredicted RBP8.06□□□□□ -1.12
CALD1-224ENST00000498254 TMEM106CQ9BVX2 250 aa8.06□□□□□ -1.12
CALD1-224ENST00000498254 TPRNQ4KMQ1 711 aa8.05□□□□□ -1.12
CALD1-224ENST00000498254 DCAF8Q5TAQ9 597 aa8.05□□□□□ -1.12
CALD1-224ENST00000498254 TRIM41Q8WV44 630 aa8.05□□□□□ -1.12
CALD1-224ENST00000498254 HS3ST6Q96QI5 342 aa8.05□□□□□ -1.12
CALD1-224ENST00000498254 GSE1Q14687 1217 aa8.04□□□□□ -1.12
CALD1-224ENST00000498254 PLCG2P16885 1265 aa8.03□□□□□ -1.12
CALD1-224ENST00000498254 HS6ST3Q8IZP7 471 aa8.03□□□□□ -1.12
CALD1-224ENST00000498254 MYT1LQ9UL68 1186 aa8.03□□□□□ -1.12
CALD1-224ENST00000498254 IRX5P78411 483 aaPredicted RBP8□□□□□ -1.13
CALD1-224ENST00000498254 FAM205CA6NFA0 338 aa7.99□□□□□ -1.13
CALD1-224ENST00000498254 RIOK3O14730 519 aaKnown RBP7.98□□□□□ -1.13
CALD1-224ENST00000498254 OCEL1Q9H607 264 aa7.98□□□□□ -1.13
CALD1-224ENST00000498254 STK25O00506 426 aa7.96□□□□□ -1.14
CALD1-224ENST00000498254 NKX1-1Q15270 411 aaPredicted RBP7.96□□□□□ -1.14
CALD1-224ENST00000498254 PYGBP11216 843 aa7.95□□□□□ -1.14
CALD1-224ENST00000498254 NBR1Q14596 966 aa7.93□□□□□ -1.14
CALD1-224ENST00000498254 PCDHB8Q9UN66 801 aa7.93□□□□□ -1.14
CALD1-224ENST00000498254 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.92□□□□□ -1.14
CALD1-224ENST00000498254 POTEB3A0JP26 581 aa7.91□□□□□ -1.14
CALD1-224ENST00000498254 POTEBQ6S5H4 581 aa7.91□□□□□ -1.14
CALD1-224ENST00000498254 VGFO15240 615 aaPredicted RBP7.9□□□□□ -1.14
CALD1-224ENST00000498254 GTPBP6O43824 516 aaPredicted RBP7.9□□□□□ -1.14
CALD1-224ENST00000498254 STK24Q9Y6E0 443 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms