RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 CHRDL2Q6WN34 429 aa17.3■□□□□ 0.36
GARNL3-221ENST00000497703 FARP1Q9Y4F1 1045 aaPredicted RBP17.3■□□□□ 0.36
GARNL3-221ENST00000497703 BBXQ8WY36 941 aaPredicted RBP17.29■□□□□ 0.36
GARNL3-221ENST00000497703 FXR2P51116 673 aaKnown RBP eCLIP17.27■□□□□ 0.36
GARNL3-221ENST00000497703 CHGAP10645 457 aaKnown RBP17.24■□□□□ 0.35
GARNL3-221ENST00000497703 RIOK3O14730 519 aaKnown RBP17.21■□□□□ 0.35
GARNL3-221ENST00000497703 CHRM1P11229 460 aaPredicted RBP17.21■□□□□ 0.35
GARNL3-221ENST00000497703 TSPYL2Q9H2G4 693 aaPredicted RBP17.18■□□□□ 0.34
GARNL3-221ENST00000497703 PAK3O75914 559 aaPredicted RBP17.16■□□□□ 0.34
GARNL3-221ENST00000497703 PYGBP11216 843 aa17.15■□□□□ 0.34
GARNL3-221ENST00000497703 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
GARNL3-221ENST00000497703 PIP4P2Q8N4L2 257 aa17.14■□□□□ 0.33
GARNL3-221ENST00000497703 RNF25Q96BH1 459 aaPredicted RBP17.14■□□□□ 0.33
GARNL3-221ENST00000497703 VGFO15240 615 aaPredicted RBP17.11■□□□□ 0.33
GARNL3-221ENST00000497703 HS6ST3Q8IZP7 471 aa17.11■□□□□ 0.33
GARNL3-221ENST00000497703 PAXIP1Q6ZW49 1069 aaPredicted RBP17.09■□□□□ 0.33
GARNL3-221ENST00000497703 CFAP44Q96MT7 982 aa17.08■□□□□ 0.32
GARNL3-221ENST00000497703 SPRYD3Q8NCJ5 442 aa17.06■□□□□ 0.32
GARNL3-221ENST00000497703 STK25O00506 426 aa17.03■□□□□ 0.32
GARNL3-221ENST00000497703 ZNF467Q7Z7K2 595 aaPredicted RBP17.02■□□□□ 0.32
GARNL3-221ENST00000497703 SGIP1Q9BQI5 828 aa16.95■□□□□ 0.3
GARNL3-221ENST00000497703 CCDC61Q9Y6R9 512 aa16.95■□□□□ 0.3
GARNL3-221ENST00000497703 DNAJC5Q9H3Z4 198 aa16.93■□□□□ 0.3
GARNL3-221ENST00000497703 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.92■□□□□ 0.3
GARNL3-221ENST00000497703 ZFP91Q96JP5 570 aaPredicted RBP16.92■□□□□ 0.3
GARNL3-221ENST00000497703 STK24Q9Y6E0 443 aa16.92■□□□□ 0.3
GARNL3-221ENST00000497703 BCL11BQ9C0K0 894 aaPredicted RBP16.91■□□□□ 0.3
GARNL3-221ENST00000497703 CD44P16070 742 aaKnown RBP16.87■□□□□ 0.29
GARNL3-221ENST00000497703 VSIG10Q8N0Z9 540 aa16.87■□□□□ 0.29
GARNL3-221ENST00000497703 PDAP1Q13442 181 aaKnown RBP16.86■□□□□ 0.29
GARNL3-221ENST00000497703 ZRANB1Q9UGI0 708 aa16.86■□□□□ 0.29
GARNL3-221ENST00000497703 ZNF579Q8NAF0 562 aaKnown RBP16.85■□□□□ 0.29
GARNL3-221ENST00000497703 RYDENQ9NUL5 291 aaKnown RBP16.85■□□□□ 0.29
GARNL3-221ENST00000497703 PCDHB13Q9Y5F0 798 aa16.84■□□□□ 0.29
GARNL3-221ENST00000497703 PCDHB8Q9UN66 801 aa16.82■□□□□ 0.28
GARNL3-221ENST00000497703 KIF12Q96FN5 646 aa16.77■□□□□ 0.28
GARNL3-221ENST00000497703 MAP3K13O43283 966 aa16.76■□□□□ 0.27
GARNL3-221ENST00000497703 PSEN1P49768 467 aa16.76■□□□□ 0.27
GARNL3-221ENST00000497703 NKX1-1Q15270 411 aaPredicted RBP16.74■□□□□ 0.27
GARNL3-221ENST00000497703 IFNL1Q8IU54 200 aa16.72■□□□□ 0.27
GARNL3-221ENST00000497703 TSHZ2Q9NRE2 1034 aa16.7■□□□□ 0.26
GARNL3-221ENST00000497703 GTPBP6O43824 516 aaPredicted RBP16.69■□□□□ 0.26
GARNL3-221ENST00000497703 PHF12Q96QT6 1004 aa16.67■□□□□ 0.26
GARNL3-221ENST00000497703 C19orf67A6NJJ6 358 aa16.66■□□□□ 0.26
GARNL3-221ENST00000497703 KDM2AQ9Y2K7 1162 aa16.58■□□□□ 0.24
GARNL3-221ENST00000497703 HAX1O00165 279 aa16.56■□□□□ 0.24
GARNL3-221ENST00000497703 GOLGA2Q08379 1002 aa16.56■□□□□ 0.24
GARNL3-221ENST00000497703 CABP2Q9NPB3 220 aa16.56■□□□□ 0.24
GARNL3-221ENST00000497703 BCANQ96GW7 911 aa16.52■□□□□ 0.24
GARNL3-221ENST00000497703 SOX12O15370 315 aa16.49■□□□□ 0.23
GARNL3-221ENST00000497703 MS4A3Q96HJ5 214 aa16.49■□□□□ 0.23
GARNL3-221ENST00000497703 CLCN6P51797 869 aa16.48■□□□□ 0.23
GARNL3-221ENST00000497703 EFCAB3Q8N7B9 438 aa16.48■□□□□ 0.23
GARNL3-221ENST00000497703 TMEM106CQ9BVX2 250 aa16.48■□□□□ 0.23
GARNL3-221ENST00000497703 NLRP6P59044 892 aa16.47■□□□□ 0.23
GARNL3-221ENST00000497703 MFRPQ9BY79 579 aa16.45■□□□□ 0.22
GARNL3-221ENST00000497703 MKRN3Q13064 507 aaKnown RBP16.4■□□□□ 0.22
GARNL3-221ENST00000497703 TIE1P35590 1138 aa16.39■□□□□ 0.21
GARNL3-221ENST00000497703 PHF8Q9UPP1 1060 aa16.36■□□□□ 0.21
GARNL3-221ENST00000497703 TRPC6Q9Y210 931 aa16.33■□□□□ 0.2
GARNL3-221ENST00000497703 FBXO22Q8NEZ5 403 aa16.32■□□□□ 0.2
GARNL3-221ENST00000497703 TTLL13PA6NNM8 815 aa16.3■□□□□ 0.2
GARNL3-221ENST00000497703 GALR2O43603 387 aaPredicted RBP16.3■□□□□ 0.2
GARNL3-221ENST00000497703 WDR70Q9NW82 654 aa16.3■□□□□ 0.2
GARNL3-221ENST00000497703 NBR1Q14596 966 aa16.27■□□□□ 0.2
GARNL3-221ENST00000497703 BMP2KQ9NSY1 1161 aaPredicted RBP16.26■□□□□ 0.19
GARNL3-221ENST00000497703 EVX2Q03828 476 aa16.24■□□□□ 0.19
GARNL3-221ENST00000497703 TRIM35Q9UPQ4 493 aa16.23■□□□□ 0.19
GARNL3-221ENST00000497703 PPP1R37O75864 691 aa16.22■□□□□ 0.19
GARNL3-221ENST00000497703 P3H3Q8IVL6 736 aa16.2■□□□□ 0.18
GARNL3-221ENST00000497703 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.2■□□□□ 0.18
GARNL3-221ENST00000497703 POTEHQ6S545 545 aa16.18■□□□□ 0.18
GARNL3-221ENST00000497703 CADPS2Q86UW7 1296 aa16.17■□□□□ 0.18
GARNL3-221ENST00000497703 MS4A4AQ96JQ5 239 aa16.16■□□□□ 0.18
GARNL3-221ENST00000497703 ATN1P54259 1190 aaPredicted RBP16.09■□□□□ 0.17
GARNL3-221ENST00000497703 ATMINO43313 823 aaPredicted RBP16.08■□□□□ 0.16
GARNL3-221ENST00000497703 GABBR2O75899 941 aa16.08■□□□□ 0.16
GARNL3-221ENST00000497703 ASTLQ6HA08 431 aaPredicted RBP16.08■□□□□ 0.16
GARNL3-221ENST00000497703 DCBLD2Q96PD2 775 aa16.08■□□□□ 0.16
GARNL3-221ENST00000497703 PDE4AP27815 886 aa16.07■□□□□ 0.16
GARNL3-221ENST00000497703 IER5LQ5T953 404 aa16.07■□□□□ 0.16
GARNL3-221ENST00000497703 ILDR1Q86SU0 546 aaPredicted RBP16.05■□□□□ 0.16
GARNL3-221ENST00000497703 G3V3G9 751 aa16.04■□□□□ 0.16
GARNL3-221ENST00000497703 OCEL1Q9H607 264 aa16.01■□□□□ 0.15
GARNL3-221ENST00000497703 LARP6Q9BRS8 491 aaKnown RBP16■□□□□ 0.15
GARNL3-221ENST00000497703 PLCG2P16885 1265 aa15.99■□□□□ 0.15
GARNL3-221ENST00000497703 E2F4Q16254 413 aa15.98■□□□□ 0.15
GARNL3-221ENST00000497703 KCNV2Q8TDN2 545 aa15.96■□□□□ 0.15
GARNL3-221ENST00000497703 SEC24BO95487 1268 aa15.95■□□□□ 0.14
GARNL3-221ENST00000497703 IRX5P78411 483 aaPredicted RBP15.95■□□□□ 0.14
GARNL3-221ENST00000497703 DDX27Q96GQ7 796 aaKnown RBP15.95■□□□□ 0.14
GARNL3-221ENST00000497703 NCKAP5LQ9HCH0 1330 aa15.94■□□□□ 0.14
GARNL3-221ENST00000497703 PDCD7Q8N8D1 485 aaKnown RBP15.93■□□□□ 0.14
GARNL3-221ENST00000497703 CRISPLD2Q9H0B8 497 aa15.93■□□□□ 0.14
GARNL3-221ENST00000497703 DPY19L2Q6NUT2 758 aa15.92■□□□□ 0.14
GARNL3-221ENST00000497703 MICALL2Q8IY33 904 aa15.9■□□□□ 0.14
GARNL3-221ENST00000497703 ARHGEF1Q92888 912 aaKnown RBP15.9■□□□□ 0.14
GARNL3-221ENST00000497703 BOLA1Q9Y3E2 137 aa15.9■□□□□ 0.14
GARNL3-221ENST00000497703 MFSD10Q14728 455 aa15.89■□□□□ 0.13
GARNL3-221ENST00000497703 SLC39A7Q92504 469 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms