RNA–Protein interactions for RNA: ENST00000497409.1

ZNF561-221, Transcript of zinc finger protein 561, humanhuman

TSL 2

Gene ZNF561, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-221ENST00000497409 TAOK2Q9UL54 1235 aa12.92□□□□□ -0.34
ZNF561-221ENST00000497409 DCAF8Q5TAQ9 597 aa12.91□□□□□ -0.34
ZNF561-221ENST00000497409 CREBZFQ9NS37 354 aa12.9□□□□□ -0.34
ZNF561-221ENST00000497409 CLEC11AQ9Y240 323 aa12.9□□□□□ -0.34
ZNF561-221ENST00000497409 PRR29P0C7W0 189 aa12.89□□□□□ -0.35
ZNF561-221ENST00000497409 PRKCSHP14314 528 aaPredicted RBP12.88□□□□□ -0.35
ZNF561-221ENST00000497409 DNAJC5Q9H3Z4 198 aa12.88□□□□□ -0.35
ZNF561-221ENST00000497409 NISCHQ9Y2I1 1504 aa12.88□□□□□ -0.35
ZNF561-221ENST00000497409 RIOK3O14730 519 aaKnown RBP12.86□□□□□ -0.35
ZNF561-221ENST00000497409 MNX1P50219 401 aaPredicted RBP12.86□□□□□ -0.35
ZNF561-221ENST00000497409 FAM212AQ96EL1 285 aa12.86□□□□□ -0.35
ZNF561-221ENST00000497409 REM2Q8IYK8 340 aaPredicted RBP12.85□□□□□ -0.35
ZNF561-221ENST00000497409 NKX1-1Q15270 411 aaPredicted RBP12.79□□□□□ -0.36
ZNF561-221ENST00000497409 CHRM1P11229 460 aaPredicted RBP12.78□□□□□ -0.36
ZNF561-221ENST00000497409 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
ZNF561-221ENST00000497409 VGFO15240 615 aaPredicted RBP12.76□□□□□ -0.37
ZNF561-221ENST00000497409 STK25O00506 426 aa12.74□□□□□ -0.37
ZNF561-221ENST00000497409 TPRNQ4KMQ1 711 aa12.74□□□□□ -0.37
ZNF561-221ENST00000497409 GTPBP6O43824 516 aaPredicted RBP12.72□□□□□ -0.37
ZNF561-221ENST00000497409 PITPNM1O00562 1244 aa12.7□□□□□ -0.38
ZNF561-221ENST00000497409 SGIP1Q9BQI5 828 aa12.69□□□□□ -0.38
ZNF561-221ENST00000497409 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.65□□□□□ -0.38
ZNF561-221ENST00000497409 PYGBP11216 843 aa12.65□□□□□ -0.38
ZNF561-221ENST00000497409 ZFP91Q96JP5 570 aaPredicted RBP12.65□□□□□ -0.38
ZNF561-221ENST00000497409 NBR1Q14596 966 aa12.64□□□□□ -0.39
ZNF561-221ENST00000497409 BCL11BQ9C0K0 894 aaPredicted RBP12.64□□□□□ -0.39
ZNF561-221ENST00000497409 STK24Q9Y6E0 443 aa12.64□□□□□ -0.39
ZNF561-221ENST00000497409 RYDENQ9NUL5 291 aaKnown RBP12.59□□□□□ -0.39
ZNF561-221ENST00000497409 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
ZNF561-221ENST00000497409 TSPYL2Q9H2G4 693 aaPredicted RBP12.51□□□□□ -0.41
ZNF561-221ENST00000497409 ZNF467Q7Z7K2 595 aaPredicted RBP12.5□□□□□ -0.41
ZNF561-221ENST00000497409 FARP1Q9Y4F1 1045 aaPredicted RBP12.48□□□□□ -0.41
ZNF561-221ENST00000497409 PDAP1Q13442 181 aaKnown RBP12.44□□□□□ -0.42
ZNF561-221ENST00000497409 PCDHB8Q9UN66 801 aa12.42□□□□□ -0.42
ZNF561-221ENST00000497409 PCDHB13Q9Y5F0 798 aa12.42□□□□□ -0.42
ZNF561-221ENST00000497409 CCDC61Q9Y6R9 512 aa12.4□□□□□ -0.42
ZNF561-221ENST00000497409 PRKAR2AP13861 404 aaKnown RBP12.38□□□□□ -0.43
ZNF561-221ENST00000497409 ZNF579Q8NAF0 562 aaKnown RBP12.36□□□□□ -0.43
ZNF561-221ENST00000497409 PSEN1P49768 467 aa12.35□□□□□ -0.43
ZNF561-221ENST00000497409 P3H3Q8IVL6 736 aa12.35□□□□□ -0.43
ZNF561-221ENST00000497409 CADPS2Q86UW7 1296 aa12.34□□□□□ -0.43
ZNF561-221ENST00000497409 FXR2P51116 673 aaKnown RBP eCLIP12.32□□□□□ -0.44
ZNF561-221ENST00000497409 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
ZNF561-221ENST00000497409 WDR70Q9NW82 654 aa12.3□□□□□ -0.44
ZNF561-221ENST00000497409 PAK3O75914 559 aaPredicted RBP12.28□□□□□ -0.44
ZNF561-221ENST00000497409 IFNL1Q8IU54 200 aa12.26□□□□□ -0.45
ZNF561-221ENST00000497409 KCNV2Q8TDN2 545 aa12.26□□□□□ -0.45
ZNF561-221ENST00000497409 MAP3K13O43283 966 aa12.23□□□□□ -0.45
ZNF561-221ENST00000497409 KIF12Q96FN5 646 aa12.23□□□□□ -0.45
ZNF561-221ENST00000497409 EFCAB3Q8N7B9 438 aa12.21□□□□□ -0.45
ZNF561-221ENST00000497409 NLRP6P59044 892 aa12.2□□□□□ -0.46
ZNF561-221ENST00000497409 FBXO22Q8NEZ5 403 aa12.2□□□□□ -0.46
ZNF561-221ENST00000497409 CABP2Q9NPB3 220 aa12.2□□□□□ -0.46
ZNF561-221ENST00000497409 SOX12O15370 315 aa12.19□□□□□ -0.46
ZNF561-221ENST00000497409 PPP1R37O75864 691 aa12.19□□□□□ -0.46
ZNF561-221ENST00000497409 CHRDL2Q6WN34 429 aa12.17□□□□□ -0.46
ZNF561-221ENST00000497409 PIP4P2Q8N4L2 257 aa12.17□□□□□ -0.46
ZNF561-221ENST00000497409 PHF8Q9UPP1 1060 aa12.16□□□□□ -0.46
ZNF561-221ENST00000497409 LMOD2Q6P5Q4 547 aa12.12□□□□□ -0.47
ZNF561-221ENST00000497409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.12□□□□□ -0.47
ZNF561-221ENST00000497409 ARHGEF1Q92888 912 aaKnown RBP12.1□□□□□ -0.47
ZNF561-221ENST00000497409 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
ZNF561-221ENST00000497409 E2F4Q16254 413 aa12.08□□□□□ -0.48
ZNF561-221ENST00000497409 CD44P16070 742 aaKnown RBP12.07□□□□□ -0.48
ZNF561-221ENST00000497409 PHF12Q96QT6 1004 aa12.07□□□□□ -0.48
ZNF561-221ENST00000497409 TULP1O00294 542 aaPredicted RBP12.04□□□□□ -0.48
ZNF561-221ENST00000497409 MS4A4AQ96JQ5 239 aa12.04□□□□□ -0.48
ZNF561-221ENST00000497409 NCKAP5LQ9HCH0 1330 aa12.03□□□□□ -0.48
ZNF561-221ENST00000497409 PDE4AP27815 886 aa11.99□□□□□ -0.49
ZNF561-221ENST00000497409 GOLGA2Q08379 1002 aa11.99□□□□□ -0.49
ZNF561-221ENST00000497409 LARP6Q9BRS8 491 aaKnown RBP11.99□□□□□ -0.49
ZNF561-221ENST00000497409 TMEM106CQ9BVX2 250 aa11.99□□□□□ -0.49
ZNF561-221ENST00000497409 TESPA1A2RU30 521 aaPredicted RBP11.97□□□□□ -0.49
ZNF561-221ENST00000497409 SEMA3EO15041 775 aa11.97□□□□□ -0.49
ZNF561-221ENST00000497409 MFSD10Q14728 455 aa11.97□□□□□ -0.49
ZNF561-221ENST00000497409 TMEM132AQ24JP5 1023 aa11.96□□□□□ -0.49
ZNF561-221ENST00000497409 CRISPLD2Q9H0B8 497 aa11.96□□□□□ -0.49
ZNF561-221ENST00000497409 MS4A3Q96HJ5 214 aa11.94□□□□□ -0.5
ZNF561-221ENST00000497409 TRPC6Q9Y210 931 aa11.94□□□□□ -0.5
ZNF561-221ENST00000497409 GTF3C3Q9Y5Q9 886 aa11.94□□□□□ -0.5
ZNF561-221ENST00000497409 ZC3H15Q8WU90 426 aaKnown RBP11.93□□□□□ -0.5
ZNF561-221ENST00000497409 DDX27Q96GQ7 796 aaKnown RBP11.93□□□□□ -0.5
ZNF561-221ENST00000497409 MKRN3Q13064 507 aaKnown RBP11.92□□□□□ -0.5
ZNF561-221ENST00000497409 ARIH1Q9Y4X5 557 aaPredicted RBP11.9□□□□□ -0.5
ZNF561-221ENST00000497409 CAMK2BQ13554 666 aa11.88□□□□□ -0.51
ZNF561-221ENST00000497409 TIMELESSQ9UNS1 1208 aa11.88□□□□□ -0.51
ZNF561-221ENST00000497409 C19orf67A6NJJ6 358 aa11.87□□□□□ -0.51
ZNF561-221ENST00000497409 TIE1P35590 1138 aa11.86□□□□□ -0.51
ZNF561-221ENST00000497409 SMYD5Q6GMV2 418 aa11.86□□□□□ -0.51
ZNF561-221ENST00000497409 BRPF1P55201 1214 aaPredicted RBP11.85□□□□□ -0.51
ZNF561-221ENST00000497409 TTLL13PA6NNM8 815 aa11.83□□□□□ -0.52
ZNF561-221ENST00000497409 ILDR1Q86SU0 546 aaPredicted RBP11.83□□□□□ -0.52
ZNF561-221ENST00000497409 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.82□□□□□ -0.52
ZNF561-221ENST00000497409 SLC24A3Q9HC58 644 aa11.81□□□□□ -0.52
ZNF561-221ENST00000497409 PPP1R15BQ5SWA1 713 aa11.79□□□□□ -0.52
ZNF561-221ENST00000497409 ZMYND10O75800 440 aa11.78□□□□□ -0.52
ZNF561-221ENST00000497409 ERICH6Q7L0X2 663 aa11.78□□□□□ -0.52
ZNF561-221ENST00000497409 GPHNQ9NQX3 736 aaPredicted RBP11.78□□□□□ -0.52
ZNF561-221ENST00000497409 BMP2KQ9NSY1 1161 aaPredicted RBP11.78□□□□□ -0.52
ZNF561-221ENST00000497409 NEUROD2Q15784 382 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms