RNA–Protein interactions for RNA: ENST00000497305.1

SHOC2-207, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

TSL 1 (best)

Gene SHOC2, Length 325 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-207ENST00000497305 CREBZFQ9NS37 354 aa13.77□□□□□ -0.21
SHOC2-207ENST00000497305 SLC4A1APQ9BWU0 796 aaKnown RBP13.75□□□□□ -0.21
SHOC2-207ENST00000497305 ZBTB22O15209 634 aa13.74□□□□□ -0.21
SHOC2-207ENST00000497305 MMRN1Q13201 1228 aa13.74□□□□□ -0.21
SHOC2-207ENST00000497305 MS4A3Q96HJ5 214 aa13.67□□□□□ -0.22
SHOC2-207ENST00000497305 PAK3O75914 559 aaPredicted RBP13.66□□□□□ -0.22
SHOC2-207ENST00000497305 SPNS2Q8IVW8 549 aa13.64□□□□□ -0.23
SHOC2-207ENST00000497305 POTEFA5A3E0 1075 aa13.63□□□□□ -0.23
SHOC2-207ENST00000497305 ATN1P54259 1190 aaPredicted RBP13.56□□□□□ -0.24
SHOC2-207ENST00000497305 ST18O60284 1047 aa13.5□□□□□ -0.25
SHOC2-207ENST00000497305 MNX1P50219 401 aaPredicted RBP13.4□□□□□ -0.26
SHOC2-207ENST00000497305 COLQQ9Y215 455 aaPredicted RBP13.37□□□□□ -0.27
SHOC2-207ENST00000497305 BMP2KQ9NSY1 1161 aaPredicted RBP13.36□□□□□ -0.27
SHOC2-207ENST00000497305 NPM1P06748 294 aaKnown RBP eCLIP13.35□□□□□ -0.27
SHOC2-207ENST00000497305 STAG3Q9UJ98 1225 aa13.33□□□□□ -0.28
SHOC2-207ENST00000497305 TRPC6Q9Y210 931 aa13.31□□□□□ -0.28
SHOC2-207ENST00000497305 SLAIN1Q8ND83 568 aa13.27□□□□□ -0.29
SHOC2-207ENST00000497305 SEC24BO95487 1268 aa13.21□□□□□ -0.29
SHOC2-207ENST00000497305 KIF12Q96FN5 646 aa13.19□□□□□ -0.3
SHOC2-207ENST00000497305 TMEM121BQ9BXQ6 578 aaPredicted RBP13.19□□□□□ -0.3
SHOC2-207ENST00000497305 CCDC61Q9Y6R9 512 aa13.19□□□□□ -0.3
SHOC2-207ENST00000497305 TIE1P35590 1138 aa13.18□□□□□ -0.3
SHOC2-207ENST00000497305 MARVELD3Q96A59 401 aa13.15□□□□□ -0.3
SHOC2-207ENST00000497305 TSPYL2Q9H2G4 693 aaPredicted RBP13.15□□□□□ -0.3
SHOC2-207ENST00000497305 TTLL13PA6NNM8 815 aa13.11□□□□□ -0.31
SHOC2-207ENST00000497305 KRTAP3-3Q9BYR6 98 aa13.09□□□□□ -0.31
SHOC2-207ENST00000497305 KRTAP3-2Q9BYR7 98 aa13.09□□□□□ -0.31
SHOC2-207ENST00000497305 IER5LQ5T953 404 aa13.06□□□□□ -0.32
SHOC2-207ENST00000497305 MAP3K13O43283 966 aa13.04□□□□□ -0.32
SHOC2-207ENST00000497305 TRIM35Q9UPQ4 493 aa13.01□□□□□ -0.33
SHOC2-207ENST00000497305 POTEB3A0JP26 581 aa12.97□□□□□ -0.33
SHOC2-207ENST00000497305 POTEBQ6S5H4 581 aa12.97□□□□□ -0.33
SHOC2-207ENST00000497305 SNPHO15079 494 aa12.93□□□□□ -0.34
SHOC2-207ENST00000497305 EMP3P54852 163 aa12.89□□□□□ -0.35
SHOC2-207ENST00000497305 HS3ST6Q96QI5 342 aa12.89□□□□□ -0.35
SHOC2-207ENST00000497305 PLCG2P16885 1265 aa12.84□□□□□ -0.35
SHOC2-207ENST00000497305 IRX5P78411 483 aaPredicted RBP12.81□□□□□ -0.36
SHOC2-207ENST00000497305 FAM205CA6NFA0 338 aa12.8□□□□□ -0.36
SHOC2-207ENST00000497305 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
SHOC2-207ENST00000497305 RNF166Q96A37 237 aaPredicted RBP12.75□□□□□ -0.37
SHOC2-207ENST00000497305 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.75□□□□□ -0.37
SHOC2-207ENST00000497305 RASEFQ8IZ41 740 aa12.73□□□□□ -0.37
SHOC2-207ENST00000497305 SGIP1Q9BQI5 828 aa12.69□□□□□ -0.38
SHOC2-207ENST00000497305 PCDHB13Q9Y5F0 798 aa12.69□□□□□ -0.38
SHOC2-207ENST00000497305 TMEM106CQ9BVX2 250 aa12.67□□□□□ -0.38
SHOC2-207ENST00000497305 OCEL1Q9H607 264 aa12.65□□□□□ -0.38
SHOC2-207ENST00000497305 IFNL1Q8IU54 200 aa12.63□□□□□ -0.39
SHOC2-207ENST00000497305 MYT1LQ9UL68 1186 aa12.56□□□□□ -0.4
SHOC2-207ENST00000497305 C3orf67Q6ZVT6 689 aa12.47□□□□□ -0.41
SHOC2-207ENST00000497305 PDCD7Q8N8D1 485 aaKnown RBP12.43□□□□□ -0.42
SHOC2-207ENST00000497305 HOXB3P14651 431 aaPredicted RBP12.38□□□□□ -0.43
SHOC2-207ENST00000497305 HOXB1P14653 301 aaPredicted RBP12.35□□□□□ -0.43
SHOC2-207ENST00000497305 ERBB3P21860 1342 aa12.35□□□□□ -0.43
SHOC2-207ENST00000497305 PROM2Q8N271 834 aa12.34□□□□□ -0.43
SHOC2-207ENST00000497305 PLEKHG5O94827 1062 aa12.3□□□□□ -0.44
SHOC2-207ENST00000497305 MIER1Q8N108 512 aa12.3□□□□□ -0.44
SHOC2-207ENST00000497305 L3MBTL3Q96JM7 780 aaPredicted RBP12.3□□□□□ -0.44
SHOC2-207ENST00000497305 NUBP1P53384 320 aa12.29□□□□□ -0.44
SHOC2-207ENST00000497305 VARS2Q5ST30 1063 aaKnown RBP12.27□□□□□ -0.45
SHOC2-207ENST00000497305 PTGER2P43116 358 aa12.26□□□□□ -0.45
SHOC2-207ENST00000497305 PLA2G2EQ9NZK7 142 aa12.24□□□□□ -0.45
SHOC2-207ENST00000497305 ZNF710Q8N1W2 664 aa12.2□□□□□ -0.46
SHOC2-207ENST00000497305 ZNF687Q8N1G0 1237 aa12.19□□□□□ -0.46
SHOC2-207ENST00000497305 PCDHB8Q9UN66 801 aa12.16□□□□□ -0.46
SHOC2-207ENST00000497305 FAM212AQ96EL1 285 aa12.14□□□□□ -0.47
SHOC2-207ENST00000497305 DOK7Q18PE1 504 aa12.11□□□□□ -0.47
SHOC2-207ENST00000497305 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.1□□□□□ -0.47
SHOC2-207ENST00000497305 MKRN3Q13064 507 aaKnown RBP12.08□□□□□ -0.48
SHOC2-207ENST00000497305 ANKRD13DQ6ZTN6 518 aa12.08□□□□□ -0.48
SHOC2-207ENST00000497305 PYGBP11216 843 aa12.07□□□□□ -0.48
SHOC2-207ENST00000497305 DPY19L2Q6NUT2 758 aa12.06□□□□□ -0.48
SHOC2-207ENST00000497305 ILDR1Q86SU0 546 aaPredicted RBP12.05□□□□□ -0.48
SHOC2-207ENST00000497305 PLCD3Q8N3E9 789 aa12.03□□□□□ -0.48
SHOC2-207ENST00000497305 GOLGA2Q08379 1002 aa12□□□□□ -0.49
SHOC2-207ENST00000497305 RIMBP2O15034 1052 aa11.98□□□□□ -0.49
SHOC2-207ENST00000497305 ZBTB47Q9UFB7 747 aaPredicted RBP11.98□□□□□ -0.49
SHOC2-207ENST00000497305 LSM11P83369 360 aaKnown RBP eCLIP11.96□□□□□ -0.49
SHOC2-207ENST00000497305 BOLA1Q9Y3E2 137 aa11.96□□□□□ -0.49
SHOC2-207ENST00000497305 HCSTQ9UBK5 93 aa11.95□□□□□ -0.5
SHOC2-207ENST00000497305 GPR153Q6NV75 609 aa11.93□□□□□ -0.5
SHOC2-207ENST00000497305 ZSWIM6Q9HCJ5 1215 aa11.91□□□□□ -0.5
SHOC2-207ENST00000497305 CSRNP3Q8WYN3 585 aa11.89□□□□□ -0.51
SHOC2-207ENST00000497305 IRX2Q9BZI1 471 aaPredicted RBP11.89□□□□□ -0.51
SHOC2-207ENST00000497305 G3V3G9 751 aa11.87□□□□□ -0.51
SHOC2-207ENST00000497305 DCAF8Q5TAQ9 597 aa11.87□□□□□ -0.51
SHOC2-207ENST00000497305 ZNF467Q7Z7K2 595 aaPredicted RBP11.81□□□□□ -0.52
SHOC2-207ENST00000497305 PSEN1P49768 467 aa11.79□□□□□ -0.52
SHOC2-207ENST00000497305 TMEM92Q6UXU6 159 aa11.78□□□□□ -0.52
SHOC2-207ENST00000497305 ZNF316A6NFI3 1004 aaPredicted RBP11.77□□□□□ -0.53
SHOC2-207ENST00000497305 RGS20O76081 388 aa11.76□□□□□ -0.53
SHOC2-207ENST00000497305 POTEEQ6S8J3 1075 aa11.76□□□□□ -0.53
SHOC2-207ENST00000497305 ARSIQ5FYB1 569 aa11.75□□□□□ -0.53
SHOC2-207ENST00000497305 KHSRPQ92945 711 aaKnown RBP eCLIP11.71□□□□□ -0.531e-7■■□□□ 13.5
SHOC2-207ENST00000497305 PBX2P40425 430 aa11.68□□□□□ -0.54
SHOC2-207ENST00000497305 AXIN2Q9Y2T1 843 aa11.67□□□□□ -0.54
SHOC2-207ENST00000497305 CABP2Q9NPB3 220 aa11.66□□□□□ -0.54
SHOC2-207ENST00000497305 ADGRD1Q6QNK2 874 aa11.6□□□□□ -0.55
SHOC2-207ENST00000497305 PDAP1Q13442 181 aaKnown RBP11.59□□□□□ -0.55
SHOC2-207ENST00000497305 MICALL2Q8IY33 904 aa11.58□□□□□ -0.56
SHOC2-207ENST00000497305 CHRM1P11229 460 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms