RNA–Protein interactions for RNA: ENST00000497163.1

CPS1-209, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-209ENST00000497163 ATMINO43313 823 aaPredicted RBP12.11□□□□□ -0.47
CPS1-209ENST00000497163 MIER1Q8N108 512 aa12.11□□□□□ -0.47
CPS1-209ENST00000497163 KIF12Q96FN5 646 aa12.09□□□□□ -0.47
CPS1-209ENST00000497163 PLSCR2Q9NRY7 297 aa12.08□□□□□ -0.48
CPS1-209ENST00000497163 PLEKHG5O94827 1062 aa12.07□□□□□ -0.48
CPS1-209ENST00000497163 RASEFQ8IZ41 740 aa12.06□□□□□ -0.48
CPS1-209ENST00000497163 METRNQ9UJH8 293 aa12.05□□□□□ -0.48
CPS1-209ENST00000497163 SLC39A7Q92504 469 aa12.04□□□□□ -0.48
CPS1-209ENST00000497163 C7P10643 843 aa12.03□□□□□ -0.48
CPS1-209ENST00000497163 MAP3K13O43283 966 aa12□□□□□ -0.49
CPS1-209ENST00000497163 ATN1P54259 1190 aaPredicted RBP12□□□□□ -0.49
CPS1-209ENST00000497163 POTEJP0CG39 1038 aa11.99□□□□□ -0.49
CPS1-209ENST00000497163 TRPC6Q9Y210 931 aa11.99□□□□□ -0.49
CPS1-209ENST00000497163 PLCD3Q8N3E9 789 aa11.98□□□□□ -0.49
CPS1-209ENST00000497163 BMP2KQ9NSY1 1161 aaPredicted RBP11.97□□□□□ -0.49
CPS1-209ENST00000497163 NUBP1P53384 320 aa11.95□□□□□ -0.5
CPS1-209ENST00000497163 FKBP8Q14318 412 aa11.95□□□□□ -0.5
CPS1-209ENST00000497163 TIE1P35590 1138 aa11.94□□□□□ -0.5
CPS1-209ENST00000497163 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
CPS1-209ENST00000497163 POTEFA5A3E0 1075 aa11.91□□□□□ -0.5
CPS1-209ENST00000497163 SGIP1Q9BQI5 828 aa11.9□□□□□ -0.5
CPS1-209ENST00000497163 TTLL13PA6NNM8 815 aa11.87□□□□□ -0.51
CPS1-209ENST00000497163 MAMSTRQ6ZN01 415 aa11.87□□□□□ -0.51
CPS1-209ENST00000497163 PCDHB13Q9Y5F0 798 aa11.84□□□□□ -0.51
CPS1-209ENST00000497163 POTEMA6NI47 508 aa11.8□□□□□ -0.52
CPS1-209ENST00000497163 FAM212AQ96EL1 285 aa11.8□□□□□ -0.52
CPS1-209ENST00000497163 IFNL1Q8IU54 200 aa11.79□□□□□ -0.52
CPS1-209ENST00000497163 SCUBE2Q9NQ36 999 aa11.79□□□□□ -0.52
CPS1-209ENST00000497163 COLQQ9Y215 455 aaPredicted RBP11.79□□□□□ -0.52
CPS1-209ENST00000497163 POTEGQ6S5H5 508 aa11.77□□□□□ -0.53
CPS1-209ENST00000497163 TRIM35Q9UPQ4 493 aa11.77□□□□□ -0.53
CPS1-209ENST00000497163 IER5LQ5T953 404 aa11.76□□□□□ -0.53
CPS1-209ENST00000497163 LCE2DQ5TA82 110 aaPredicted RBP11.74□□□□□ -0.53
CPS1-209ENST00000497163 FBXO3Q9UK99 471 aa11.74□□□□□ -0.53
CPS1-209ENST00000497163 SEC24BO95487 1268 aa11.72□□□□□ -0.53
CPS1-209ENST00000497163 TMEM106CQ9BVX2 250 aa11.7□□□□□ -0.54
CPS1-209ENST00000497163 DCAF8Q5TAQ9 597 aa11.68□□□□□ -0.54
CPS1-209ENST00000497163 FAM163AQ96GL9 167 aaPredicted RBP11.66□□□□□ -0.54
CPS1-209ENST00000497163 PYGBP11216 843 aa11.65□□□□□ -0.54
CPS1-209ENST00000497163 PCDH10Q9P2E7 1040 aa11.65□□□□□ -0.54
CPS1-209ENST00000497163 IRX5P78411 483 aaPredicted RBP11.63□□□□□ -0.55
CPS1-209ENST00000497163 VASPP50552 380 aaPredicted RBP11.62□□□□□ -0.55
CPS1-209ENST00000497163 PCDHB8Q9UN66 801 aa11.59□□□□□ -0.55
CPS1-209ENST00000497163 PLCG2P16885 1265 aa11.58□□□□□ -0.56
CPS1-209ENST00000497163 GSE1Q14687 1217 aa11.55□□□□□ -0.56
CPS1-209ENST00000497163 KLHL34Q8N239 644 aa11.55□□□□□ -0.56
CPS1-209ENST00000497163 OCEL1Q9H607 264 aa11.55□□□□□ -0.56
CPS1-209ENST00000497163 SLAIN1Q8ND83 568 aa11.53□□□□□ -0.56
CPS1-209ENST00000497163 CHRM1P11229 460 aaPredicted RBP11.52□□□□□ -0.57
CPS1-209ENST00000497163 ZNF467Q7Z7K2 595 aaPredicted RBP11.5□□□□□ -0.57
CPS1-209ENST00000497163 PDCD7Q8N8D1 485 aaKnown RBP11.45□□□□□ -0.58
CPS1-209ENST00000497163 ST18O60284 1047 aa11.44□□□□□ -0.58
CPS1-209ENST00000497163 IFNLR1Q8IU57 520 aaPredicted RBP11.43□□□□□ -0.58
CPS1-209ENST00000497163 PSEN1P49768 467 aa11.4□□□□□ -0.58
CPS1-209ENST00000497163 CDAN1Q8IWY9 1227 aa11.39□□□□□ -0.59
CPS1-209ENST00000497163 SPOCK2Q92563 424 aa11.39□□□□□ -0.59
CPS1-209ENST00000497163 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.39□□□□□ -0.59
CPS1-209ENST00000497163 MKRN3Q13064 507 aaKnown RBP11.38□□□□□ -0.59
CPS1-209ENST00000497163 ILDR1Q86SU0 546 aaPredicted RBP11.37□□□□□ -0.59
CPS1-209ENST00000497163 GOLGA2Q08379 1002 aa11.35□□□□□ -0.59
CPS1-209ENST00000497163 PDAP1Q13442 181 aaKnown RBP11.34□□□□□ -0.59
CPS1-209ENST00000497163 SNPHO15079 494 aa11.33□□□□□ -0.6
CPS1-209ENST00000497163 L3MBTL3Q96JM7 780 aaPredicted RBP11.33□□□□□ -0.6
CPS1-209ENST00000497163 TMEM121BQ9BXQ6 578 aaPredicted RBP11.33□□□□□ -0.6
CPS1-209ENST00000497163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.6
CPS1-209ENST00000497163 CIZ1Q9ULV3 898 aaPredicted RBP11.31□□□□□ -0.6
CPS1-209ENST00000497163 C3orf67Q6ZVT6 689 aa11.28□□□□□ -0.6
CPS1-209ENST00000497163 DPY19L2Q6NUT2 758 aa11.25□□□□□ -0.61
CPS1-209ENST00000497163 CABP2Q9NPB3 220 aa11.25□□□□□ -0.61
CPS1-209ENST00000497163 MARVELD3Q96A59 401 aa11.22□□□□□ -0.61
CPS1-209ENST00000497163 TRIM41Q8WV44 630 aa11.2□□□□□ -0.62
CPS1-209ENST00000497163 BOLA1Q9Y3E2 137 aa11.18□□□□□ -0.62
CPS1-209ENST00000497163 SPNS2Q8IVW8 549 aa11.14□□□□□ -0.63
CPS1-209ENST00000497163 EMP3P54852 163 aa11.12□□□□□ -0.63
CPS1-209ENST00000497163 EFCAB3Q8N7B9 438 aa11.12□□□□□ -0.63
CPS1-209ENST00000497163 POTEB3A0JP26 581 aa11.11□□□□□ -0.63
CPS1-209ENST00000497163 HOXB3P14651 431 aaPredicted RBP11.11□□□□□ -0.63
CPS1-209ENST00000497163 POTEBQ6S5H4 581 aa11.11□□□□□ -0.63
CPS1-209ENST00000497163 G3V3G9 751 aa11.1□□□□□ -0.63
CPS1-209ENST00000497163 MMRN1Q13201 1228 aa11.1□□□□□ -0.63
CPS1-209ENST00000497163 RNF25Q96BH1 459 aaPredicted RBP11.08□□□□□ -0.64
CPS1-209ENST00000497163 HS3ST6Q96QI5 342 aa11.08□□□□□ -0.64
CPS1-209ENST00000497163 FAM205CA6NFA0 338 aa11.05□□□□□ -0.64
CPS1-209ENST00000497163 RIOK3O14730 519 aaKnown RBP11.05□□□□□ -0.64
CPS1-209ENST00000497163 KRTAP3-3Q9BYR6 98 aa11.05□□□□□ -0.64
CPS1-209ENST00000497163 KRTAP3-2Q9BYR7 98 aa11.05□□□□□ -0.64
CPS1-209ENST00000497163 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.02□□□□□ -0.65
CPS1-209ENST00000497163 SOX12O15370 315 aa11.02□□□□□ -0.65
CPS1-209ENST00000497163 HOXB1P14653 301 aaPredicted RBP11.02□□□□□ -0.65
CPS1-209ENST00000497163 ZFP91Q96JP5 570 aaPredicted RBP11.02□□□□□ -0.65
CPS1-209ENST00000497163 MICALL2Q8IY33 904 aa11.01□□□□□ -0.65
CPS1-209ENST00000497163 VGFO15240 615 aaPredicted RBP11□□□□□ -0.65
CPS1-209ENST00000497163 TMEM92Q6UXU6 159 aa11□□□□□ -0.65
CPS1-209ENST00000497163 MS4A4AQ96JQ5 239 aa11□□□□□ -0.65
CPS1-209ENST00000497163 DOK7Q18PE1 504 aa10.99□□□□□ -0.65
CPS1-209ENST00000497163 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
CPS1-209ENST00000497163 PHF8Q9UPP1 1060 aa10.96□□□□□ -0.65
CPS1-209ENST00000497163 RIMBP2O15034 1052 aa10.9□□□□□ -0.66
CPS1-209ENST00000497163 ZSWIM6Q9HCJ5 1215 aa10.9□□□□□ -0.66
CPS1-209ENST00000497163 ERBB3P21860 1342 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms