RNA–Protein interactions for RNA: ENST00000497155.1

USP13-204, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 899 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-204ENST00000497155 LHX8Q68G74 356 aa12.29□□□□□ -0.44
USP13-204ENST00000497155 NUBP1P53384 320 aa12.26□□□□□ -0.45
USP13-204ENST00000497155 KIF12Q96FN5 646 aa12.24□□□□□ -0.45
USP13-204ENST00000497155 FBXO3Q9UK99 471 aa12.24□□□□□ -0.45
USP13-204ENST00000497155 ZBTB47Q9UFB7 747 aaPredicted RBP12.22□□□□□ -0.45
USP13-204ENST00000497155 PELP1Q8IZL8 1130 aaKnown RBP12.21□□□□□ -0.45
USP13-204ENST00000497155 NISCHQ9Y2I1 1504 aa12.21□□□□□ -0.46
USP13-204ENST00000497155 MAP3K13O43283 966 aa12.2□□□□□ -0.46
USP13-204ENST00000497155 TRPC6Q9Y210 931 aa12.18□□□□□ -0.46
USP13-204ENST00000497155 VASPP50552 380 aaPredicted RBP12.16□□□□□ -0.46
USP13-204ENST00000497155 ATMINO43313 823 aaPredicted RBP12.15□□□□□ -0.46
USP13-204ENST00000497155 ASTLQ6HA08 431 aaPredicted RBP12.15□□□□□ -0.46
USP13-204ENST00000497155 POTEB2H3BUK9 544 aa12.11□□□□□ -0.47
USP13-204ENST00000497155 FAM212AQ96EL1 285 aa12.11□□□□□ -0.47
USP13-204ENST00000497155 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
USP13-204ENST00000497155 BMP2KQ9NSY1 1161 aaPredicted RBP12.09□□□□□ -0.47
USP13-204ENST00000497155 PCDHB13Q9Y5F0 798 aa12.08□□□□□ -0.48
USP13-204ENST00000497155 DCAF8Q5TAQ9 597 aa12.07□□□□□ -0.48
USP13-204ENST00000497155 KLHL34Q8N239 644 aa12.07□□□□□ -0.48
USP13-204ENST00000497155 METRNQ9UJH8 293 aa12.06□□□□□ -0.48
USP13-204ENST00000497155 IFNL1Q8IU54 200 aa12.03□□□□□ -0.48
USP13-204ENST00000497155 PYGBP11216 843 aa12.02□□□□□ -0.49
USP13-204ENST00000497155 TIE1P35590 1138 aa12.02□□□□□ -0.49
USP13-204ENST00000497155 SLC39A7Q92504 469 aa12.02□□□□□ -0.49
USP13-204ENST00000497155 SGIP1Q9BQI5 828 aa12.01□□□□□ -0.49
USP13-204ENST00000497155 TTLL13PA6NNM8 815 aa12□□□□□ -0.49
USP13-204ENST00000497155 IFNLR1Q8IU57 520 aaPredicted RBP12□□□□□ -0.49
USP13-204ENST00000497155 C7P10643 843 aa11.99□□□□□ -0.49
USP13-204ENST00000497155 OTUD5Q96G74 571 aa11.98□□□□□ -0.49
USP13-204ENST00000497155 POTEFA5A3E0 1075 aa11.96□□□□□ -0.49
USP13-204ENST00000497155 POTEJP0CG39 1038 aa11.96□□□□□ -0.49
USP13-204ENST00000497155 PCDHB8Q9UN66 801 aa11.93□□□□□ -0.5
USP13-204ENST00000497155 TRIM35Q9UPQ4 493 aa11.92□□□□□ -0.5
USP13-204ENST00000497155 GSE1Q14687 1217 aa11.91□□□□□ -0.5
USP13-204ENST00000497155 TMEM106CQ9BVX2 250 aa11.9□□□□□ -0.5
USP13-204ENST00000497155 SPOCK2Q92563 424 aa11.89□□□□□ -0.51
USP13-204ENST00000497155 COLQQ9Y215 455 aaPredicted RBP11.89□□□□□ -0.51
USP13-204ENST00000497155 CIZ1Q9ULV3 898 aaPredicted RBP11.83□□□□□ -0.52
USP13-204ENST00000497155 SEC24BO95487 1268 aa11.82□□□□□ -0.52
USP13-204ENST00000497155 CHRM1P11229 460 aaPredicted RBP11.8□□□□□ -0.52
USP13-204ENST00000497155 IER5LQ5T953 404 aa11.8□□□□□ -0.52
USP13-204ENST00000497155 ZNF467Q7Z7K2 595 aaPredicted RBP11.77□□□□□ -0.53
USP13-204ENST00000497155 MAMSTRQ6ZN01 415 aa11.76□□□□□ -0.53
USP13-204ENST00000497155 IRX5P78411 483 aaPredicted RBP11.74□□□□□ -0.53
USP13-204ENST00000497155 SCUBE2Q9NQ36 999 aa11.74□□□□□ -0.53
USP13-204ENST00000497155 PLCG2P16885 1265 aa11.71□□□□□ -0.53
USP13-204ENST00000497155 PSEN1P49768 467 aa11.71□□□□□ -0.53
USP13-204ENST00000497155 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
USP13-204ENST00000497155 PDAP1Q13442 181 aaKnown RBP11.64□□□□□ -0.55
USP13-204ENST00000497155 GOLGA2Q08379 1002 aa11.62□□□□□ -0.55
USP13-204ENST00000497155 MKRN3Q13064 507 aaKnown RBP11.61□□□□□ -0.55
USP13-204ENST00000497155 LCE2DQ5TA82 110 aaPredicted RBP11.61□□□□□ -0.55
USP13-204ENST00000497155 PDCD7Q8N8D1 485 aaKnown RBP11.61□□□□□ -0.55
USP13-204ENST00000497155 CABP2Q9NPB3 220 aa11.59□□□□□ -0.55
USP13-204ENST00000497155 POTEMA6NI47 508 aa11.58□□□□□ -0.56
USP13-204ENST00000497155 FAM163AQ96GL9 167 aaPredicted RBP11.58□□□□□ -0.56
USP13-204ENST00000497155 SLAIN1Q8ND83 568 aa11.57□□□□□ -0.56
USP13-204ENST00000497155 TRIM41Q8WV44 630 aa11.57□□□□□ -0.56
USP13-204ENST00000497155 RNF25Q96BH1 459 aaPredicted RBP11.57□□□□□ -0.56
USP13-204ENST00000497155 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.56□□□□□ -0.563e-7■■□□□ 13.5
USP13-204ENST00000497155 POTEGQ6S5H5 508 aa11.55□□□□□ -0.56
USP13-204ENST00000497155 DPY19L2Q6NUT2 758 aa11.52□□□□□ -0.57
USP13-204ENST00000497155 ILDR1Q86SU0 546 aaPredicted RBP11.5□□□□□ -0.57
USP13-204ENST00000497155 RIOK3O14730 519 aaKnown RBP11.49□□□□□ -0.57
USP13-204ENST00000497155 EFCAB3Q8N7B9 438 aa11.48□□□□□ -0.57
USP13-204ENST00000497155 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.48□□□□□ -0.57
USP13-204ENST00000497155 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.46□□□□□ -0.57
USP13-204ENST00000497155 ZFP91Q96JP5 570 aaPredicted RBP11.46□□□□□ -0.57
USP13-204ENST00000497155 L3MBTL3Q96JM7 780 aaPredicted RBP11.45□□□□□ -0.58
USP13-204ENST00000497155 VGFO15240 615 aaPredicted RBP11.42□□□□□ -0.58
USP13-204ENST00000497155 C3orf67Q6ZVT6 689 aa11.42□□□□□ -0.58
USP13-204ENST00000497155 ST18O60284 1047 aa11.41□□□□□ -0.58
USP13-204ENST00000497155 ECM2O94769 699 aaPredicted RBP11.38□□□□□ -0.59
USP13-204ENST00000497155 PKD2Q13563 968 aa11.38□□□□□ -0.59
USP13-204ENST00000497155 PLSCR2Q9NRY7 297 aa11.38□□□□□ -0.59
USP13-204ENST00000497155 BOLA1Q9Y3E2 137 aa11.37□□□□□ -0.59
USP13-204ENST00000497155 RTN4Q9NQC3 1192 aaKnown RBP11.35□□□□□ -0.59
USP13-204ENST00000497155 PHF8Q9UPP1 1060 aa11.34□□□□□ -0.59
USP13-204ENST00000497155 RGL2O15211 777 aa11.33□□□□□ -0.6
USP13-204ENST00000497155 AMER1Q5JTC6 1135 aaPredicted RBP11.33□□□□□ -0.6
USP13-204ENST00000497155 MS4A4AQ96JQ5 239 aa11.33□□□□□ -0.6
USP13-204ENST00000497155 BCL11BQ9C0K0 894 aaPredicted RBP11.33□□□□□ -0.6
USP13-204ENST00000497155 G3V3G9 751 aa11.32□□□□□ -0.6
USP13-204ENST00000497155 SOX12O15370 315 aa11.31□□□□□ -0.6
USP13-204ENST00000497155 TMEM121BQ9BXQ6 578 aaPredicted RBP11.3□□□□□ -0.6
USP13-204ENST00000497155 STK24Q9Y6E0 443 aa11.3□□□□□ -0.6
USP13-204ENST00000497155 SNPHO15079 494 aa11.29□□□□□ -0.6
USP13-204ENST00000497155 STK25O00506 426 aa11.27□□□□□ -0.61
USP13-204ENST00000497155 MARVELD3Q96A59 401 aa11.27□□□□□ -0.61
USP13-204ENST00000497155 MICALL2Q8IY33 904 aa11.26□□□□□ -0.61
USP13-204ENST00000497155 PCDH10Q9P2E7 1040 aa11.26□□□□□ -0.61
USP13-204ENST00000497155 TAOK2Q9UL54 1235 aa11.25□□□□□ -0.61
USP13-204ENST00000497155 TMEM92Q6UXU6 159 aa11.24□□□□□ -0.61
USP13-204ENST00000497155 CDAN1Q8IWY9 1227 aa11.24□□□□□ -0.61
USP13-204ENST00000497155 FBXO22Q8NEZ5 403 aa11.23□□□□□ -0.61
USP13-204ENST00000497155 MFRPQ9BY79 579 aa11.22□□□□□ -0.61
USP13-204ENST00000497155 HOXB3P14651 431 aaPredicted RBP11.2□□□□□ -0.62
USP13-204ENST00000497155 NLRP6P59044 892 aa11.2□□□□□ -0.62
USP13-204ENST00000497155 EMP3P54852 163 aa11.15□□□□□ -0.62
USP13-204ENST00000497155 POTEB3A0JP26 581 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms