RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 C7P10643 843 aa12.11□□□□□ -0.47
VPS26A-208ENST00000497022 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
VPS26A-208ENST00000497022 TSPYL2Q9H2G4 693 aaPredicted RBP12.1□□□□□ -0.47
VPS26A-208ENST00000497022 CCDC61Q9Y6R9 512 aa12.1□□□□□ -0.47
VPS26A-208ENST00000497022 PLEKHG5O94827 1062 aa12.09□□□□□ -0.47
VPS26A-208ENST00000497022 MAMSTRQ6ZN01 415 aa12.03□□□□□ -0.48
VPS26A-208ENST00000497022 KIF12Q96FN5 646 aa12.03□□□□□ -0.48
VPS26A-208ENST00000497022 PLSCR2Q9NRY7 297 aa12.03□□□□□ -0.48
VPS26A-208ENST00000497022 MIER1Q8N108 512 aa12□□□□□ -0.49
VPS26A-208ENST00000497022 ATN1P54259 1190 aaPredicted RBP11.98□□□□□ -0.49
VPS26A-208ENST00000497022 POTEMA6NI47 508 aa11.97□□□□□ -0.49
VPS26A-208ENST00000497022 POTEJP0CG39 1038 aa11.96□□□□□ -0.49
VPS26A-208ENST00000497022 TIE1P35590 1138 aa11.95□□□□□ -0.5
VPS26A-208ENST00000497022 RASEFQ8IZ41 740 aa11.94□□□□□ -0.5
VPS26A-208ENST00000497022 BMP2KQ9NSY1 1161 aaPredicted RBP11.94□□□□□ -0.5
VPS26A-208ENST00000497022 MAP3K13O43283 966 aa11.93□□□□□ -0.5
VPS26A-208ENST00000497022 POTEGQ6S5H5 508 aa11.93□□□□□ -0.5
VPS26A-208ENST00000497022 SCUBE2Q9NQ36 999 aa11.93□□□□□ -0.5
VPS26A-208ENST00000497022 ZBTB47Q9UFB7 747 aaPredicted RBP11.91□□□□□ -0.5
VPS26A-208ENST00000497022 PLCD3Q8N3E9 789 aa11.89□□□□□ -0.51
VPS26A-208ENST00000497022 SGIP1Q9BQI5 828 aa11.89□□□□□ -0.51
VPS26A-208ENST00000497022 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
VPS26A-208ENST00000497022 TRPC6Q9Y210 931 aa11.89□□□□□ -0.51
VPS26A-208ENST00000497022 POTEFA5A3E0 1075 aa11.85□□□□□ -0.51
VPS26A-208ENST00000497022 TTLL13PA6NNM8 815 aa11.84□□□□□ -0.51
VPS26A-208ENST00000497022 IER5LQ5T953 404 aa11.81□□□□□ -0.52
VPS26A-208ENST00000497022 NUBP1P53384 320 aa11.8□□□□□ -0.52
VPS26A-208ENST00000497022 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
VPS26A-208ENST00000497022 SEC24BO95487 1268 aa11.79□□□□□ -0.52
VPS26A-208ENST00000497022 LCE2DQ5TA82 110 aaPredicted RBP11.77□□□□□ -0.53
VPS26A-208ENST00000497022 FAM212AQ96EL1 285 aa11.77□□□□□ -0.53
VPS26A-208ENST00000497022 TRIM35Q9UPQ4 493 aa11.76□□□□□ -0.53
VPS26A-208ENST00000497022 COLQQ9Y215 455 aaPredicted RBP11.76□□□□□ -0.53
VPS26A-208ENST00000497022 FAM163AQ96GL9 167 aaPredicted RBP11.75□□□□□ -0.53
VPS26A-208ENST00000497022 IFNL1Q8IU54 200 aa11.71□□□□□ -0.53
VPS26A-208ENST00000497022 FKBP8Q14318 412 aa11.68□□□□□ -0.54
VPS26A-208ENST00000497022 TMEM106CQ9BVX2 250 aa11.66□□□□□ -0.54
VPS26A-208ENST00000497022 PLCG2P16885 1265 aa11.62□□□□□ -0.55
VPS26A-208ENST00000497022 FBXO3Q9UK99 471 aa11.6□□□□□ -0.55
VPS26A-208ENST00000497022 IRX5P78411 483 aaPredicted RBP11.59□□□□□ -0.55
VPS26A-208ENST00000497022 SLAIN1Q8ND83 568 aa11.59□□□□□ -0.55
VPS26A-208ENST00000497022 DCAF8Q5TAQ9 597 aa11.57□□□□□ -0.56
VPS26A-208ENST00000497022 OCEL1Q9H607 264 aa11.54□□□□□ -0.56
VPS26A-208ENST00000497022 PYGBP11216 843 aa11.53□□□□□ -0.56
VPS26A-208ENST00000497022 CDAN1Q8IWY9 1227 aa11.51□□□□□ -0.57
VPS26A-208ENST00000497022 ST18O60284 1047 aa11.5□□□□□ -0.57
VPS26A-208ENST00000497022 PCDHB8Q9UN66 801 aa11.48□□□□□ -0.57
VPS26A-208ENST00000497022 GSE1Q14687 1217 aa11.46□□□□□ -0.57
VPS26A-208ENST00000497022 ZNF467Q7Z7K2 595 aaPredicted RBP11.46□□□□□ -0.57
VPS26A-208ENST00000497022 SNPHO15079 494 aa11.45□□□□□ -0.58
VPS26A-208ENST00000497022 TMEM121BQ9BXQ6 578 aaPredicted RBP11.45□□□□□ -0.58
VPS26A-208ENST00000497022 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.45□□□□□ -0.58
VPS26A-208ENST00000497022 VASPP50552 380 aaPredicted RBP11.42□□□□□ -0.58
VPS26A-208ENST00000497022 KLHL34Q8N239 644 aa11.41□□□□□ -0.58
VPS26A-208ENST00000497022 CHRM1P11229 460 aaPredicted RBP11.4□□□□□ -0.58
VPS26A-208ENST00000497022 GOLGA2Q08379 1002 aa11.38□□□□□ -0.59
VPS26A-208ENST00000497022 PDCD7Q8N8D1 485 aaKnown RBP11.38□□□□□ -0.59
VPS26A-208ENST00000497022 MKRN3Q13064 507 aaKnown RBP11.37□□□□□ -0.59
VPS26A-208ENST00000497022 L3MBTL3Q96JM7 780 aaPredicted RBP11.36□□□□□ -0.59
VPS26A-208ENST00000497022 C3orf67Q6ZVT6 689 aa11.34□□□□□ -0.59
VPS26A-208ENST00000497022 PSEN1P49768 467 aa11.31□□□□□ -0.6
VPS26A-208ENST00000497022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.29□□□□□ -0.6
VPS26A-208ENST00000497022 PDAP1Q13442 181 aaKnown RBP11.27□□□□□ -0.61
VPS26A-208ENST00000497022 ILDR1Q86SU0 546 aaPredicted RBP11.27□□□□□ -0.61
VPS26A-208ENST00000497022 MARVELD3Q96A59 401 aa11.26□□□□□ -0.61
VPS26A-208ENST00000497022 SPNS2Q8IVW8 549 aa11.24□□□□□ -0.61
VPS26A-208ENST00000497022 MMRN1Q13201 1228 aa11.23□□□□□ -0.61
VPS26A-208ENST00000497022 SPOCK2Q92563 424 aa11.22□□□□□ -0.61
VPS26A-208ENST00000497022 EMP3P54852 163 aa11.21□□□□□ -0.61
VPS26A-208ENST00000497022 G3V3G9 751 aa11.16□□□□□ -0.62
VPS26A-208ENST00000497022 IFNLR1Q8IU57 520 aaPredicted RBP11.16□□□□□ -0.62
VPS26A-208ENST00000497022 CABP2Q9NPB3 220 aa11.16□□□□□ -0.62
VPS26A-208ENST00000497022 CIZ1Q9ULV3 898 aaPredicted RBP11.16□□□□□ -0.62
VPS26A-208ENST00000497022 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
VPS26A-208ENST00000497022 HS3ST6Q96QI5 342 aa11.13□□□□□ -0.63
VPS26A-208ENST00000497022 DPY19L2Q6NUT2 758 aa11.12□□□□□ -0.63
VPS26A-208ENST00000497022 TRIM41Q8WV44 630 aa11.11□□□□□ -0.63
VPS26A-208ENST00000497022 FAM205CA6NFA0 338 aa11.1□□□□□ -0.63
VPS26A-208ENST00000497022 KRTAP3-3Q9BYR6 98 aa11.08□□□□□ -0.64
VPS26A-208ENST00000497022 KRTAP3-2Q9BYR7 98 aa11.08□□□□□ -0.64
VPS26A-208ENST00000497022 POTEB3A0JP26 581 aa11.07□□□□□ -0.64
VPS26A-208ENST00000497022 HOXB3P14651 431 aaPredicted RBP11.07□□□□□ -0.64
VPS26A-208ENST00000497022 POTEBQ6S5H4 581 aa11.07□□□□□ -0.64
VPS26A-208ENST00000497022 DOK7Q18PE1 504 aa11.04□□□□□ -0.64
VPS26A-208ENST00000497022 HOXB1P14653 301 aaPredicted RBP11.03□□□□□ -0.64
VPS26A-208ENST00000497022 ZNF710Q8N1W2 664 aa11.03□□□□□ -0.64
VPS26A-208ENST00000497022 EFCAB3Q8N7B9 438 aa10.99□□□□□ -0.65
VPS26A-208ENST00000497022 RIMBP2O15034 1052 aa10.98□□□□□ -0.65
VPS26A-208ENST00000497022 ERBB3P21860 1342 aa10.95□□□□□ -0.66
VPS26A-208ENST00000497022 MICALL2Q8IY33 904 aa10.94□□□□□ -0.66
VPS26A-208ENST00000497022 ZSWIM6Q9HCJ5 1215 aa10.94□□□□□ -0.66
VPS26A-208ENST00000497022 SOX12O15370 315 aa10.93□□□□□ -0.66
VPS26A-208ENST00000497022 RIOK3O14730 519 aaKnown RBP10.91□□□□□ -0.66
VPS26A-208ENST00000497022 VGFO15240 615 aaPredicted RBP10.87□□□□□ -0.67
VPS26A-208ENST00000497022 TMEM92Q6UXU6 159 aa10.87□□□□□ -0.67
VPS26A-208ENST00000497022 VARS2Q5ST30 1063 aaKnown RBP10.86□□□□□ -0.67
VPS26A-208ENST00000497022 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.85□□□□□ -0.67
VPS26A-208ENST00000497022 RNF25Q96BH1 459 aaPredicted RBP10.85□□□□□ -0.67
VPS26A-208ENST00000497022 ZFP91Q96JP5 570 aaPredicted RBP10.85□□□□□ -0.67
VPS26A-208ENST00000497022 MS4A4AQ96JQ5 239 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms