RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 NPM2Q86SE8 214 aaKnown RBP3.42□□□□□ -1.86
UBR4-217ENST00000497018 PLEKHG5O94827 1062 aa3.41□□□□□ -1.86
UBR4-217ENST00000497018 STAG3Q9UJ98 1225 aa3.41□□□□□ -1.86
UBR4-217ENST00000497018 CAPN15O75808 1086 aa3.4□□□□□ -1.87
UBR4-217ENST00000497018 ILDR1Q86SU0 546 aaPredicted RBP3.4□□□□□ -1.87
UBR4-217ENST00000497018 P3H3Q8IVL6 736 aa3.39□□□□□ -1.87
UBR4-217ENST00000497018 PLCD3Q8N3E9 789 aa3.39□□□□□ -1.87
UBR4-217ENST00000497018 KCNV2Q8TDN2 545 aa3.39□□□□□ -1.87
UBR4-217ENST00000497018 ZBTB47Q9UFB7 747 aaPredicted RBP3.39□□□□□ -1.87
UBR4-217ENST00000497018 C1orf115Q9H7X2 142 aa3.38□□□□□ -1.87
UBR4-217ENST00000497018 NEUROD2Q15784 382 aa3.37□□□□□ -1.87
UBR4-217ENST00000497018 ZC3H15Q8WU90 426 aaKnown RBP3.37□□□□□ -1.87
UBR4-217ENST00000497018 CIZ1Q9ULV3 898 aaPredicted RBP3.37□□□□□ -1.87
UBR4-217ENST00000497018 C1QBPQ07021 282 aaKnown RBP3.36□□□□□ -1.87
UBR4-217ENST00000497018 ZNF692Q9BU19 519 aaPredicted RBP3.36□□□□□ -1.87
UBR4-217ENST00000497018 RSPH6AQ9H0K4 717 aa3.36□□□□□ -1.87
UBR4-217ENST00000497018 MIER1Q8N108 512 aa3.35□□□□□ -1.87
UBR4-217ENST00000497018 ZMYND15Q9H091 742 aa3.35□□□□□ -1.87
UBR4-217ENST00000497018 SSUH2Q9Y2M2 353 aa3.35□□□□□ -1.87
UBR4-217ENST00000497018 SPDYE2BA6NHP3 402 aa3.34□□□□□ -1.87
UBR4-217ENST00000497018 RIOK3O14730 519 aaKnown RBP3.34□□□□□ -1.87
UBR4-217ENST00000497018 SPDYE6P0CI01 402 aa3.34□□□□□ -1.87
UBR4-217ENST00000497018 SPDYE2Q495Y8 402 aa3.34□□□□□ -1.87
UBR4-217ENST00000497018 CADPS2Q86UW7 1296 aa3.34□□□□□ -1.87
UBR4-217ENST00000497018 SGIP1Q9BQI5 828 aa3.34□□□□□ -1.87
UBR4-217ENST00000497018 SLC24A3Q9HC58 644 aa3.34□□□□□ -1.87
UBR4-217ENST00000497018 SPINK5Q9NQ38 1064 aaPredicted RBP3.34□□□□□ -1.87
UBR4-217ENST00000497018 RNF39Q9H2S5 420 aa3.33□□□□□ -1.88
UBR4-217ENST00000497018 TESPA1A2RU30 521 aaPredicted RBP3.32□□□□□ -1.88
UBR4-217ENST00000497018 NECTIN2Q92692 538 aa3.32□□□□□ -1.88
UBR4-217ENST00000497018 STK25O00506 426 aa3.31□□□□□ -1.88
UBR4-217ENST00000497018 VGFO15240 615 aaPredicted RBP3.31□□□□□ -1.88
UBR4-217ENST00000497018 ZMYND10O75800 440 aa3.31□□□□□ -1.88
UBR4-217ENST00000497018 NUBP1P53384 320 aa3.31□□□□□ -1.88
UBR4-217ENST00000497018 ABCB7O75027 752 aa3.3□□□□□ -1.88
UBR4-217ENST00000497018 PABPN1Q86U42 306 aaKnown RBP eCLIP3.3□□□□□ -1.88
UBR4-217ENST00000497018 RYDENQ9NUL5 291 aaKnown RBP3.3□□□□□ -1.88
UBR4-217ENST00000497018 CCDC9Q9Y3X0 531 aaKnown RBP3.3□□□□□ -1.88
UBR4-217ENST00000497018 GSE1Q14687 1217 aa3.29□□□□□ -1.88
UBR4-217ENST00000497018 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.28□□□□□ -1.88
UBR4-217ENST00000497018 BARGINQ6ZT62 677 aa3.28□□□□□ -1.88
UBR4-217ENST00000497018 ARHGEF1Q92888 912 aaKnown RBP3.28□□□□□ -1.88
UBR4-217ENST00000497018 ZFP91Q96JP5 570 aaPredicted RBP3.28□□□□□ -1.88
UBR4-217ENST00000497018 BCL11BQ9C0K0 894 aaPredicted RBP3.28□□□□□ -1.88
UBR4-217ENST00000497018 GPBP1L1Q9HC44 474 aaPredicted RBP3.28□□□□□ -1.88
UBR4-217ENST00000497018 SEMA3EO15041 775 aa3.27□□□□□ -1.89
UBR4-217ENST00000497018 CHRM1P11229 460 aaPredicted RBP3.27□□□□□ -1.89
UBR4-217ENST00000497018 MKRN3Q13064 507 aaKnown RBP3.27□□□□□ -1.89
UBR4-217ENST00000497018 ARID3AQ99856 593 aa3.27□□□□□ -1.89
UBR4-217ENST00000497018 LOC105371045A0A1W2PR82 267 aa3.26□□□□□ -1.89
UBR4-217ENST00000497018 ONECUT3O60422 494 aaPredicted RBP3.26□□□□□ -1.89
UBR4-217ENST00000497018 OSCARQ8IYS5 282 aa3.26□□□□□ -1.89
UBR4-217ENST00000497018 STK24Q9Y6E0 443 aa3.26□□□□□ -1.89
UBR4-217ENST00000497018 CUX2O14529 1486 aa3.26□□□□□ -1.89
UBR4-217ENST00000497018 ZBTB7CA1YPR0 619 aa3.25□□□□□ -1.89
UBR4-217ENST00000497018 ARID3CA6NKF2 412 aa3.25□□□□□ -1.89
UBR4-217ENST00000497018 PDIA4P13667 645 aaKnown RBP3.25□□□□□ -1.89
UBR4-217ENST00000497018 KDM4CQ9H3R0 1056 aa3.25□□□□□ -1.89
UBR4-217ENST00000497018 WDR70Q9NW82 654 aa3.25□□□□□ -1.89
UBR4-217ENST00000497018 APBB1O00213 710 aa3.24□□□□□ -1.89
UBR4-217ENST00000497018 DSG3P32926 999 aa3.24□□□□□ -1.89
UBR4-217ENST00000497018 LMTK3Q96Q04 1460 aa3.23□□□□□ -1.89
UBR4-217ENST00000497018 IGSF3O75054 1194 aa3.23□□□□□ -1.89
UBR4-217ENST00000497018 CCDC82Q8N4S0 544 aa3.23□□□□□ -1.89
UBR4-217ENST00000497018 IL27Q8NEV9 243 aa3.23□□□□□ -1.89
UBR4-217ENST00000497018 FAM212AQ96EL1 285 aa3.23□□□□□ -1.89
UBR4-217ENST00000497018 AK7Q96M32 723 aa3.23□□□□□ -1.89
UBR4-217ENST00000497018 TRAIPQ9BWF2 469 aa3.23□□□□□ -1.89
UBR4-217ENST00000497018 ARIH1Q9Y4X5 557 aaPredicted RBP3.23□□□□□ -1.89
UBR4-217ENST00000497018 MNX1P50219 401 aaPredicted RBP3.22□□□□□ -1.89
UBR4-217ENST00000497018 E2F4Q16254 413 aa3.22□□□□□ -1.89
UBR4-217ENST00000497018 DCAF8Q5TAQ9 597 aa3.22□□□□□ -1.89
UBR4-217ENST00000497018 RGS22Q8NE09 1264 aa3.22□□□□□ -1.89
UBR4-217ENST00000497018 NISCHQ9Y2I1 1504 aa3.22□□□□□ -1.89
UBR4-217ENST00000497018 PLEKHG3A1L390 1219 aa3.21□□□□□ -1.9
UBR4-217ENST00000497018 A6NJR5 290 aa3.21□□□□□ -1.9
UBR4-217ENST00000497018 SOCS7O14512 581 aa3.21□□□□□ -1.9
UBR4-217ENST00000497018 TRIM66O15016 1216 aa3.21□□□□□ -1.9
UBR4-217ENST00000497018 KCTD17Q8N5Z5 321 aa3.21□□□□□ -1.9
UBR4-217ENST00000497018 CECR2Q9BXF3 1484 aa3.21□□□□□ -1.9
UBR4-217ENST00000497018 GPR37O15354 613 aa3.2□□□□□ -1.9
UBR4-217ENST00000497018 PDE4DQ08499 809 aa3.2□□□□□ -1.9
UBR4-217ENST00000497018 FLIIQ13045 1269 aa3.2□□□□□ -1.9
UBR4-217ENST00000497018 SPDYE1Q8NFV5 336 aaPredicted RBP3.2□□□□□ -1.9
UBR4-217ENST00000497018 MFRPQ9BY79 579 aa3.2□□□□□ -1.9
UBR4-217ENST00000497018 TRAK2O60296 914 aa3.19□□□□□ -1.9
UBR4-217ENST00000497018 MFSD10Q14728 455 aa3.19□□□□□ -1.9
UBR4-217ENST00000497018 RASEFQ8IZ41 740 aa3.19□□□□□ -1.9
UBR4-217ENST00000497018 FAM117AQ9C073 453 aa3.19□□□□□ -1.9
UBR4-217ENST00000497018 NCKAP5LQ9HCH0 1330 aa3.19□□□□□ -1.9
UBR4-217ENST00000497018 PPP1R37O75864 691 aa3.18□□□□□ -1.9
UBR4-217ENST00000497018 RBM42Q9BTD8 480 aaKnown RBP3.18□□□□□ -1.9
UBR4-217ENST00000497018 RAD21O60216 631 aa3.17□□□□□ -1.9
UBR4-217ENST00000497018 PRR29P0C7W0 189 aa3.17□□□□□ -1.9
UBR4-217ENST00000497018 CAMK2BQ13554 666 aa3.17□□□□□ -1.9
UBR4-217ENST00000497018 RBM26Q5T8P6 1007 aaKnown RBP3.17□□□□□ -1.9
UBR4-217ENST00000497018 SMYD5Q6GMV2 418 aa3.17□□□□□ -1.9
UBR4-217ENST00000497018 GPIHBP1Q8IV16 184 aa3.17□□□□□ -1.9
UBR4-217ENST00000497018 FBXO22Q8NEZ5 403 aa3.17□□□□□ -1.9
UBR4-217ENST00000497018 CLUAP1Q96AJ1 413 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms