RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 CHRM1P11229 460 aaPredicted RBP8.43□□□□□ -1.06
EXOSC3-208ENST00000496910 DCAF8Q5TAQ9 597 aa8.43□□□□□ -1.06
EXOSC3-208ENST00000496910 CCDC61Q9Y6R9 512 aa8.42□□□□□ -1.06
EXOSC3-208ENST00000496910 TSPYL2Q9H2G4 693 aaPredicted RBP8.38□□□□□ -1.07
EXOSC3-208ENST00000496910 C19orf67A6NJJ6 358 aa8.37□□□□□ -1.07
EXOSC3-208ENST00000496910 SLC24A1O60721 1099 aa8.37□□□□□ -1.07
EXOSC3-208ENST00000496910 PYGBP11216 843 aa8.37□□□□□ -1.07
EXOSC3-208ENST00000496910 RIOK3O14730 519 aaKnown RBP8.33□□□□□ -1.08
EXOSC3-208ENST00000496910 CD44P16070 742 aaKnown RBP8.33□□□□□ -1.08
EXOSC3-208ENST00000496910 KIF12Q96FN5 646 aa8.31□□□□□ -1.08
EXOSC3-208ENST00000496910 SGIP1Q9BQI5 828 aa8.3□□□□□ -1.08
EXOSC3-208ENST00000496910 DCAF8L2P0C7V8 631 aa8.29□□□□□ -1.08
EXOSC3-208ENST00000496910 EVX2Q03828 476 aa8.29□□□□□ -1.08
EXOSC3-208ENST00000496910 HS6ST3Q8IZP7 471 aa8.29□□□□□ -1.08
EXOSC3-208ENST00000496910 ZNF579Q8NAF0 562 aaKnown RBP8.28□□□□□ -1.08
EXOSC3-208ENST00000496910 PHF12Q96QT6 1004 aa8.28□□□□□ -1.08
EXOSC3-208ENST00000496910 ZRANB1Q9UGI0 708 aa8.28□□□□□ -1.08
EXOSC3-208ENST00000496910 VGFO15240 615 aaPredicted RBP8.27□□□□□ -1.09
EXOSC3-208ENST00000496910 MAP3K13O43283 966 aa8.27□□□□□ -1.09
EXOSC3-208ENST00000496910 PAK3O75914 559 aaPredicted RBP8.26□□□□□ -1.09
EXOSC3-208ENST00000496910 IFNL1Q8IU54 200 aa8.26□□□□□ -1.09
EXOSC3-208ENST00000496910 PCDHB8Q9UN66 801 aa8.26□□□□□ -1.09
EXOSC3-208ENST00000496910 PCDHB13Q9Y5F0 798 aa8.26□□□□□ -1.09
EXOSC3-208ENST00000496910 CHGAP10645 457 aaKnown RBP8.25□□□□□ -1.09
EXOSC3-208ENST00000496910 BBXQ8WY36 941 aaPredicted RBP8.25□□□□□ -1.09
EXOSC3-208ENST00000496910 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.24□□□□□ -1.09
EXOSC3-208ENST00000496910 ZNF467Q7Z7K2 595 aaPredicted RBP8.24□□□□□ -1.09
EXOSC3-208ENST00000496910 ZFP91Q96JP5 570 aaPredicted RBP8.24□□□□□ -1.09
EXOSC3-208ENST00000496910 PLCB2Q00722 1185 aa8.23□□□□□ -1.09
EXOSC3-208ENST00000496910 NKX1-1Q15270 411 aaPredicted RBP8.23□□□□□ -1.09
EXOSC3-208ENST00000496910 POTEHQ6S545 545 aa8.22□□□□□ -1.09
EXOSC3-208ENST00000496910 PDAP1Q13442 181 aaKnown RBP8.19□□□□□ -1.1
EXOSC3-208ENST00000496910 MS4A3Q96HJ5 214 aa8.19□□□□□ -1.1
EXOSC3-208ENST00000496910 BCL11BQ9C0K0 894 aaPredicted RBP8.19□□□□□ -1.1
EXOSC3-208ENST00000496910 TRPC6Q9Y210 931 aa8.19□□□□□ -1.1
EXOSC3-208ENST00000496910 HAX1O00165 279 aa8.18□□□□□ -1.1
EXOSC3-208ENST00000496910 STK25O00506 426 aa8.18□□□□□ -1.1
EXOSC3-208ENST00000496910 ILDR1Q86SU0 546 aaPredicted RBP8.18□□□□□ -1.1
EXOSC3-208ENST00000496910 TAOK2Q9UL54 1235 aa8.18□□□□□ -1.1
EXOSC3-208ENST00000496910 PSEN1P49768 467 aa8.17□□□□□ -1.1
EXOSC3-208ENST00000496910 STK24Q9Y6E0 443 aa8.15□□□□□ -1.1
EXOSC3-208ENST00000496910 GALR2O43603 387 aaPredicted RBP8.14□□□□□ -1.11
EXOSC3-208ENST00000496910 GTPBP6O43824 516 aaPredicted RBP8.13□□□□□ -1.11
EXOSC3-208ENST00000496910 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.12□□□□□ -1.11
EXOSC3-208ENST00000496910 PAXIP1Q6ZW49 1069 aaPredicted RBP8.11□□□□□ -1.11
EXOSC3-208ENST00000496910 SPRYD3Q8NCJ5 442 aa8.09□□□□□ -1.11
EXOSC3-208ENST00000496910 BMP2KQ9NSY1 1161 aaPredicted RBP8.09□□□□□ -1.11
EXOSC3-208ENST00000496910 TIE1P35590 1138 aa8.08□□□□□ -1.12
EXOSC3-208ENST00000496910 MFRPQ9BY79 579 aa8.08□□□□□ -1.12
EXOSC3-208ENST00000496910 TTLL13PA6NNM8 815 aa8.07□□□□□ -1.12
EXOSC3-208ENST00000496910 CLCN6P51797 869 aa8.07□□□□□ -1.12
EXOSC3-208ENST00000496910 CFAP44Q96MT7 982 aa8.07□□□□□ -1.12
EXOSC3-208ENST00000496910 GABBR2O75899 941 aa8.06□□□□□ -1.12
EXOSC3-208ENST00000496910 EFCAB3Q8N7B9 438 aa8.06□□□□□ -1.12
EXOSC3-208ENST00000496910 FBXO22Q8NEZ5 403 aa8.06□□□□□ -1.12
EXOSC3-208ENST00000496910 TMEM106CQ9BVX2 250 aa8.06□□□□□ -1.12
EXOSC3-208ENST00000496910 CABP2Q9NPB3 220 aa8.05□□□□□ -1.12
EXOSC3-208ENST00000496910 TSHZ2Q9NRE2 1034 aa8.04□□□□□ -1.12
EXOSC3-208ENST00000496910 HAP1P54257 671 aaPredicted RBP8.02□□□□□ -1.13
EXOSC3-208ENST00000496910 ASTLQ6HA08 431 aaPredicted RBP8.02□□□□□ -1.13
EXOSC3-208ENST00000496910 MS4A4AQ96JQ5 239 aa8.02□□□□□ -1.13
EXOSC3-208ENST00000496910 ATMINO43313 823 aaPredicted RBP8.01□□□□□ -1.13
EXOSC3-208ENST00000496910 PHF8Q9UPP1 1060 aa8.01□□□□□ -1.13
EXOSC3-208ENST00000496910 KDM2AQ9Y2K7 1162 aa8.01□□□□□ -1.13
EXOSC3-208ENST00000496910 SOX12O15370 315 aa8□□□□□ -1.13
EXOSC3-208ENST00000496910 ATN1P54259 1190 aaPredicted RBP8□□□□□ -1.13
EXOSC3-208ENST00000496910 PPP1R37O75864 691 aa7.99□□□□□ -1.13
EXOSC3-208ENST00000496910 TRIM35Q9UPQ4 493 aa7.99□□□□□ -1.13
EXOSC3-208ENST00000496910 POTEIP0CG38 1075 aa7.98□□□□□ -1.13
EXOSC3-208ENST00000496910 SP7Q8TDD2 431 aaPredicted RBP7.98□□□□□ -1.13
EXOSC3-208ENST00000496910 PELP1Q8IZL8 1130 aaKnown RBP7.97□□□□□ -1.13
EXOSC3-208ENST00000496910 RYDENQ9NUL5 291 aaKnown RBP7.96□□□□□ -1.14
EXOSC3-208ENST00000496910 NLRP6P59044 892 aa7.95□□□□□ -1.14
EXOSC3-208ENST00000496910 VSIG10Q8N0Z9 540 aa7.95□□□□□ -1.14
EXOSC3-208ENST00000496910 IRX5P78411 483 aaPredicted RBP7.94□□□□□ -1.14
EXOSC3-208ENST00000496910 CADPS2Q86UW7 1296 aa7.94□□□□□ -1.14
EXOSC3-208ENST00000496910 PDCD7Q8N8D1 485 aaKnown RBP7.94□□□□□ -1.14
EXOSC3-208ENST00000496910 POTEFA5A3E0 1075 aa7.91□□□□□ -1.14
EXOSC3-208ENST00000496910 MKRN3Q13064 507 aaKnown RBP7.91□□□□□ -1.14
EXOSC3-208ENST00000496910 IER5LQ5T953 404 aa7.91□□□□□ -1.14
EXOSC3-208ENST00000496910 GOLGA2Q08379 1002 aa7.89□□□□□ -1.15
EXOSC3-208ENST00000496910 DPY19L2Q6NUT2 758 aa7.89□□□□□ -1.15
EXOSC3-208ENST00000496910 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.89□□□□□ -1.15
EXOSC3-208ENST00000496910 COLQQ9Y215 455 aaPredicted RBP7.87□□□□□ -1.15
EXOSC3-208ENST00000496910 DCBLD2Q96PD2 775 aa7.86□□□□□ -1.15
EXOSC3-208ENST00000496910 OCEL1Q9H607 264 aa7.85□□□□□ -1.15
EXOSC3-208ENST00000496910 NCKAP5LQ9HCH0 1330 aa7.84□□□□□ -1.15
EXOSC3-208ENST00000496910 TMEM121BQ9BXQ6 578 aaPredicted RBP7.84□□□□□ -1.15
EXOSC3-208ENST00000496910 SLC39A7Q92504 469 aa7.83□□□□□ -1.16
EXOSC3-208ENST00000496910 C7P10643 843 aa7.81□□□□□ -1.16
EXOSC3-208ENST00000496910 MICALL2Q8IY33 904 aa7.81□□□□□ -1.16
EXOSC3-208ENST00000496910 CRISPLD2Q9H0B8 497 aa7.81□□□□□ -1.16
EXOSC3-208ENST00000496910 METRNQ9UJH8 293 aa7.81□□□□□ -1.16
EXOSC3-208ENST00000496910 ABCC9O60706 1549 aa7.8□□□□□ -1.16
EXOSC3-208ENST00000496910 PLCG2P16885 1265 aa7.78□□□□□ -1.16
EXOSC3-208ENST00000496910 MFSD10Q14728 455 aa7.78□□□□□ -1.16
EXOSC3-208ENST00000496910 BOLA1Q9Y3E2 137 aa7.77□□□□□ -1.17
EXOSC3-208ENST00000496910 KIF3CO14782 793 aa7.75□□□□□ -1.17
EXOSC3-208ENST00000496910 TMEM92Q6UXU6 159 aa7.75□□□□□ -1.17
EXOSC3-208ENST00000496910 POTEJP0CG39 1038 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms