RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 METRNQ9UJH8 293 aa13.98□□□□□ -0.17
TRIM4-205ENST00000496896 ASTLQ6HA08 431 aaPredicted RBP13.96□□□□□ -0.17
TRIM4-205ENST00000496896 MS4A3Q96HJ5 214 aa13.96□□□□□ -0.17
TRIM4-205ENST00000496896 SLC39A7Q92504 469 aa13.95□□□□□ -0.18
TRIM4-205ENST00000496896 C7P10643 843 aa13.93□□□□□ -0.18
TRIM4-205ENST00000496896 ATMINO43313 823 aaPredicted RBP13.92□□□□□ -0.18
TRIM4-205ENST00000496896 MAMSTRQ6ZN01 415 aa13.9□□□□□ -0.18
TRIM4-205ENST00000496896 PCDH10Q9P2E7 1040 aa13.9□□□□□ -0.18
TRIM4-205ENST00000496896 POTEJP0CG39 1038 aa13.86□□□□□ -0.19
TRIM4-205ENST00000496896 TSPYL2Q9H2G4 693 aaPredicted RBP13.8□□□□□ -0.2
TRIM4-205ENST00000496896 SCUBE2Q9NQ36 999 aa13.79□□□□□ -0.2
TRIM4-205ENST00000496896 ATN1P54259 1190 aaPredicted RBP13.77□□□□□ -0.21
TRIM4-205ENST00000496896 CCDC61Q9Y6R9 512 aa13.76□□□□□ -0.21
TRIM4-205ENST00000496896 LCE2DQ5TA82 110 aaPredicted RBP13.74□□□□□ -0.21
TRIM4-205ENST00000496896 FAM163AQ96GL9 167 aaPredicted RBP13.73□□□□□ -0.21
TRIM4-205ENST00000496896 KIF12Q96FN5 646 aa13.7□□□□□ -0.22
TRIM4-205ENST00000496896 FBXO3Q9UK99 471 aa13.68□□□□□ -0.22
TRIM4-205ENST00000496896 BMP2KQ9NSY1 1161 aaPredicted RBP13.67□□□□□ -0.22
TRIM4-205ENST00000496896 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
TRIM4-205ENST00000496896 TIE1P35590 1138 aa13.63□□□□□ -0.23
TRIM4-205ENST00000496896 TRPC6Q9Y210 931 aa13.62□□□□□ -0.23
TRIM4-205ENST00000496896 MAP3K13O43283 966 aa13.59□□□□□ -0.23
TRIM4-205ENST00000496896 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
TRIM4-205ENST00000496896 SEC24BO95487 1268 aa13.56□□□□□ -0.24
TRIM4-205ENST00000496896 TTLL13PA6NNM8 815 aa13.53□□□□□ -0.24
TRIM4-205ENST00000496896 RASEFQ8IZ41 740 aa13.53□□□□□ -0.24
TRIM4-205ENST00000496896 COLQQ9Y215 455 aaPredicted RBP13.52□□□□□ -0.25
TRIM4-205ENST00000496896 MIER1Q8N108 512 aa13.5□□□□□ -0.25
TRIM4-205ENST00000496896 CDAN1Q8IWY9 1227 aa13.47□□□□□ -0.25
TRIM4-205ENST00000496896 IER5LQ5T953 404 aa13.46□□□□□ -0.25
TRIM4-205ENST00000496896 PLCD3Q8N3E9 789 aa13.45□□□□□ -0.26
TRIM4-205ENST00000496896 TRIM35Q9UPQ4 493 aa13.45□□□□□ -0.26
TRIM4-205ENST00000496896 VASPP50552 380 aaPredicted RBP13.44□□□□□ -0.26
TRIM4-205ENST00000496896 SGIP1Q9BQI5 828 aa13.44□□□□□ -0.26
TRIM4-205ENST00000496896 ZBTB47Q9UFB7 747 aaPredicted RBP13.42□□□□□ -0.26
TRIM4-205ENST00000496896 PCDHB13Q9Y5F0 798 aa13.41□□□□□ -0.26
TRIM4-205ENST00000496896 SLAIN1Q8ND83 568 aa13.38□□□□□ -0.27
TRIM4-205ENST00000496896 ST18O60284 1047 aa13.34□□□□□ -0.27
TRIM4-205ENST00000496896 PLCG2P16885 1265 aa13.3□□□□□ -0.28
TRIM4-205ENST00000496896 IFNL1Q8IU54 200 aa13.3□□□□□ -0.28
TRIM4-205ENST00000496896 TMEM106CQ9BVX2 250 aa13.29□□□□□ -0.28
TRIM4-205ENST00000496896 NUBP1P53384 320 aa13.27□□□□□ -0.29
TRIM4-205ENST00000496896 FAM212AQ96EL1 285 aa13.24□□□□□ -0.29
TRIM4-205ENST00000496896 IFNLR1Q8IU57 520 aaPredicted RBP13.22□□□□□ -0.29
TRIM4-205ENST00000496896 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
TRIM4-205ENST00000496896 KLHL34Q8N239 644 aa13.2□□□□□ -0.3
TRIM4-205ENST00000496896 TMEM121BQ9BXQ6 578 aaPredicted RBP13.19□□□□□ -0.3
TRIM4-205ENST00000496896 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
TRIM4-205ENST00000496896 SNPHO15079 494 aa13.15□□□□□ -0.3
TRIM4-205ENST00000496896 OCEL1Q9H607 264 aa13.15□□□□□ -0.3
TRIM4-205ENST00000496896 SPNS2Q8IVW8 549 aa13.14□□□□□ -0.31
TRIM4-205ENST00000496896 SPOCK2Q92563 424 aa13.12□□□□□ -0.31
TRIM4-205ENST00000496896 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.12□□□□□ -0.31
TRIM4-205ENST00000496896 MARVELD3Q96A59 401 aa13.06□□□□□ -0.32
TRIM4-205ENST00000496896 PYGBP11216 843 aa13.04□□□□□ -0.32
TRIM4-205ENST00000496896 GSE1Q14687 1217 aa13.03□□□□□ -0.32
TRIM4-205ENST00000496896 DCAF8Q5TAQ9 597 aa13.03□□□□□ -0.32
TRIM4-205ENST00000496896 PCDHB8Q9UN66 801 aa13□□□□□ -0.33
TRIM4-205ENST00000496896 C3orf67Q6ZVT6 689 aa12.97□□□□□ -0.33
TRIM4-205ENST00000496896 EMP3P54852 163 aa12.95□□□□□ -0.34
TRIM4-205ENST00000496896 PDCD7Q8N8D1 485 aaKnown RBP12.94□□□□□ -0.34
TRIM4-205ENST00000496896 L3MBTL3Q96JM7 780 aaPredicted RBP12.92□□□□□ -0.34
TRIM4-205ENST00000496896 CHRM1P11229 460 aaPredicted RBP12.91□□□□□ -0.34
TRIM4-205ENST00000496896 GOLGA2Q08379 1002 aa12.91□□□□□ -0.34
TRIM4-205ENST00000496896 TRIM41Q8WV44 630 aa12.9□□□□□ -0.34
TRIM4-205ENST00000496896 MKRN3Q13064 507 aaKnown RBP12.89□□□□□ -0.35
TRIM4-205ENST00000496896 ZNF467Q7Z7K2 595 aaPredicted RBP12.88□□□□□ -0.35
TRIM4-205ENST00000496896 CIZ1Q9ULV3 898 aaPredicted RBP12.88□□□□□ -0.35
TRIM4-205ENST00000496896 HS3ST6Q96QI5 342 aa12.86□□□□□ -0.35
TRIM4-205ENST00000496896 KRTAP3-3Q9BYR6 98 aa12.85□□□□□ -0.35
TRIM4-205ENST00000496896 KRTAP3-2Q9BYR7 98 aa12.85□□□□□ -0.35
TRIM4-205ENST00000496896 FAM205CA6NFA0 338 aa12.84□□□□□ -0.35
TRIM4-205ENST00000496896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.82□□□□□ -0.363e-9■■■■■ 35
TRIM4-205ENST00000496896 POTEB3A0JP26 581 aa12.81□□□□□ -0.36
TRIM4-205ENST00000496896 POTEBQ6S5H4 581 aa12.81□□□□□ -0.36
TRIM4-205ENST00000496896 PSEN1P49768 467 aa12.75□□□□□ -0.37
TRIM4-205ENST00000496896 PKD2Q13563 968 aa12.71□□□□□ -0.37
TRIM4-205ENST00000496896 ILDR1Q86SU0 546 aaPredicted RBP12.7□□□□□ -0.38
TRIM4-205ENST00000496896 G3V3G9 751 aa12.69□□□□□ -0.38
TRIM4-205ENST00000496896 HOXB3P14651 431 aaPredicted RBP12.66□□□□□ -0.38
TRIM4-205ENST00000496896 PDAP1Q13442 181 aaKnown RBP12.66□□□□□ -0.38
TRIM4-205ENST00000496896 DPY19L2Q6NUT2 758 aa12.66□□□□□ -0.38
TRIM4-205ENST00000496896 BOLA1Q9Y3E2 137 aa12.65□□□□□ -0.38
TRIM4-205ENST00000496896 ECM2O94769 699 aaPredicted RBP12.64□□□□□ -0.39
TRIM4-205ENST00000496896 ZNF710Q8N1W2 664 aa12.64□□□□□ -0.39
TRIM4-205ENST00000496896 HOXB1P14653 301 aaPredicted RBP12.63□□□□□ -0.39
TRIM4-205ENST00000496896 RIOK3O14730 519 aaKnown RBP12.62□□□□□ -0.39
TRIM4-205ENST00000496896 RNF25Q96BH1 459 aaPredicted RBP12.61□□□□□ -0.39
TRIM4-205ENST00000496896 CABP2Q9NPB3 220 aa12.61□□□□□ -0.39
TRIM4-205ENST00000496896 ERBB3P21860 1342 aa12.61□□□□□ -0.39
TRIM4-205ENST00000496896 DOK7Q18PE1 504 aa12.6□□□□□ -0.39
TRIM4-205ENST00000496896 TAOK2Q9UL54 1235 aa12.58□□□□□ -0.4
TRIM4-205ENST00000496896 RNF166Q96A37 237 aaPredicted RBP12.57□□□□□ -0.4
TRIM4-205ENST00000496896 VGFO15240 615 aaPredicted RBP12.56□□□□□ -0.4
TRIM4-205ENST00000496896 RIMBP2O15034 1052 aa12.53□□□□□ -0.4
TRIM4-205ENST00000496896 RGL2O15211 777 aa12.51□□□□□ -0.41
TRIM4-205ENST00000496896 AMER1Q5JTC6 1135 aaPredicted RBP12.51□□□□□ -0.41
TRIM4-205ENST00000496896 VARS2Q5ST30 1063 aaKnown RBP12.49□□□□□ -0.41
TRIM4-205ENST00000496896 MYT1LQ9UL68 1186 aa12.49□□□□□ -0.41
TRIM4-205ENST00000496896 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms