RNA–Protein interactions for RNA: ENST00000496420.5

PEX1-210, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 5,333 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-210ENST00000496420 POGKQ9P215 609 aa11.7□□□□□ -0.54
PEX1-210ENST00000496420 ANP32CO43423 234 aa11.69□□□□□ -0.54
PEX1-210ENST00000496420 KIF27Q86VH2 1401 aa11.68□□□□□ -0.54
PEX1-210ENST00000496420 CCDC9Q9Y3X0 531 aaKnown RBP11.68□□□□□ -0.54
PEX1-210ENST00000496420 EID1Q9Y6B2 187 aa11.67□□□□□ -0.54
PEX1-210ENST00000496420 ZNF316A6NFI3 1004 aaPredicted RBP11.65□□□□□ -0.54
PEX1-210ENST00000496420 KDM2AQ9Y2K7 1162 aa11.65□□□□□ -0.54
PEX1-210ENST00000496420 TONSLQ96HA7 1378 aa11.65□□□□□ -0.55
PEX1-210ENST00000496420 WRNQ14191 1432 aaPredicted RBP eCLIP11.64□□□□□ -0.55
PEX1-210ENST00000496420 PHF23Q9BUL5 403 aaPredicted RBP11.63□□□□□ -0.55
PEX1-210ENST00000496420 EIF4G2P78344 907 aaKnown RBP eCLIP11.63□□□□□ -0.55
PEX1-210ENST00000496420 TMC1Q8TDI8 760 aa11.62□□□□□ -0.55
PEX1-210ENST00000496420 EFCAB2Q5VUJ9 269 aa11.62□□□□□ -0.55
PEX1-210ENST00000496420 GGT6Q6P531 493 aa11.62□□□□□ -0.55
PEX1-210ENST00000496420 CLIP1P30622 1438 aa11.61□□□□□ -0.55
PEX1-210ENST00000496420 CDCA8Q53HL2 280 aa11.61□□□□□ -0.55
PEX1-210ENST00000496420 TMX4Q9H1E5 349 aaPredicted RBP11.61□□□□□ -0.55
PEX1-210ENST00000496420 MEX3CQ5U5Q3 659 aaKnown RBP11.6□□□□□ -0.55
PEX1-210ENST00000496420 CCNB3Q8WWL7 1395 aa11.55□□□□□ -0.56
PEX1-210ENST00000496420 CFAP53Q96M91 514 aa11.55□□□□□ -0.56
PEX1-210ENST00000496420 EIF4G1Q04637 1599 aaKnown RBP11.54□□□□□ -0.56
PEX1-210ENST00000496420 BAZ1AQ9NRL2 1556 aaPredicted RBP11.54□□□□□ -0.56
PEX1-210ENST00000496420 WDR43Q15061 677 aaKnown RBP eCLIP11.54□□□□□ -0.56
PEX1-210ENST00000496420 RGL3Q3MIN7 710 aa11.54□□□□□ -0.56
PEX1-210ENST00000496420 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
PEX1-210ENST00000496420 CSB-PGBD3P0DP91 1061 aa11.53□□□□□ -0.56
PEX1-210ENST00000496420 RRP7BPQ9NSQ0 103 aa11.52□□□□□ -0.57
PEX1-210ENST00000496420 FAM69CQ0P6D2 419 aa11.51□□□□□ -0.57
PEX1-210ENST00000496420 SOGA1O94964 1423 aa11.51□□□□□ -0.57
PEX1-210ENST00000496420 EEA1Q15075 1411 aa11.51□□□□□ -0.57
PEX1-210ENST00000496420 PPM1GO15355 546 aaPredicted RBP11.5□□□□□ -0.57
PEX1-210ENST00000496420 CUX2O14529 1486 aa11.48□□□□□ -0.57
PEX1-210ENST00000496420 CARMIL1Q5VZK9 1371 aa11.48□□□□□ -0.57
PEX1-210ENST00000496420 MYH16Q9H6N6 1097 aa11.47□□□□□ -0.57
PEX1-210ENST00000496420 CADPSQ9ULU8 1353 aa11.47□□□□□ -0.57
PEX1-210ENST00000496420 CEP164Q9UPV0 1460 aa11.46□□□□□ -0.57
PEX1-210ENST00000496420 TDRD9Q8NDG6 1382 aaKnown RBP11.46□□□□□ -0.57
PEX1-210ENST00000496420 PAK3O75914 559 aaPredicted RBP11.46□□□□□ -0.57
PEX1-210ENST00000496420 JPH4Q96JJ6 628 aa11.45□□□□□ -0.58
PEX1-210ENST00000496420 NUDCQ9Y266 331 aa11.45□□□□□ -0.58
PEX1-210ENST00000496420 GOLGA2Q08379 1002 aa11.45□□□□□ -0.58
PEX1-210ENST00000496420 SF3B2Q13435 895 aaKnown RBP11.44□□□□□ -0.58
PEX1-210ENST00000496420 WASHC2CQ9Y4E1 1318 aa11.42□□□□□ -0.58
PEX1-210ENST00000496420 CDK11BP21127 795 aaKnown RBP11.41□□□□□ -0.58
PEX1-210ENST00000496420 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.41□□□□□ -0.58
PEX1-210ENST00000496420 SRPK2P78362 688 aaKnown RBP11.41□□□□□ -0.58
PEX1-210ENST00000496420 FHAD1B1AJZ9 1412 aa11.4□□□□□ -0.58
PEX1-210ENST00000496420 PNNQ9H307 717 aaKnown RBP11.39□□□□□ -0.59
PEX1-210ENST00000496420 SPAG9O60271 1321 aaKnown RBP11.39□□□□□ -0.59
PEX1-210ENST00000496420 RSPH4AQ5TD94 716 aa11.39□□□□□ -0.59
PEX1-210ENST00000496420 KNSTRNQ9Y448 316 aa11.39□□□□□ -0.59
PEX1-210ENST00000496420 KIF3BO15066 747 aa11.39□□□□□ -0.59
PEX1-210ENST00000496420 MAPK8IP3Q9UPT6 1336 aa11.38□□□□□ -0.59
PEX1-210ENST00000496420 ABCC8Q09428 1581 aa11.38□□□□□ -0.59
PEX1-210ENST00000496420 HRCP23327 699 aa11.37□□□□□ -0.59
PEX1-210ENST00000496420 SOX12O15370 315 aa11.37□□□□□ -0.59
PEX1-210ENST00000496420 G3V3G9 751 aa11.37□□□□□ -0.59
PEX1-210ENST00000496420 DCAF8Q5TAQ9 597 aa11.37□□□□□ -0.59
PEX1-210ENST00000496420 PTPRGP23470 1445 aa11.37□□□□□ -0.59
PEX1-210ENST00000496420 HDGFL2Q7Z4V5 671 aaPredicted RBP11.36□□□□□ -0.59
PEX1-210ENST00000496420 MSH5O43196 834 aa11.36□□□□□ -0.59
PEX1-210ENST00000496420 EVA1CP58658 441 aa11.36□□□□□ -0.59
PEX1-210ENST00000496420 GOLGA3Q08378 1498 aa11.36□□□□□ -0.59
PEX1-210ENST00000496420 NGDNQ8NEJ9 315 aaKnown RBP11.35□□□□□ -0.59
PEX1-210ENST00000496420 STK26Q9P289 416 aa11.35□□□□□ -0.59
PEX1-210ENST00000496420 CHMP4AQ9BY43 222 aa11.34□□□□□ -0.59
PEX1-210ENST00000496420 ATF3P18847 181 aa11.33□□□□□ -0.6
PEX1-210ENST00000496420 HSP90AA1P07900 732 aaKnown RBP11.32□□□□□ -0.6
PEX1-210ENST00000496420 UPF2Q9HAU5 1272 aaKnown RBP11.32□□□□□ -0.6
PEX1-210ENST00000496420 DCAF1Q9Y4B6 1507 aa11.31□□□□□ -0.6
PEX1-210ENST00000496420 CARD11Q9BXL7 1154 aa11.31□□□□□ -0.6
PEX1-210ENST00000496420 SAFB2Q14151 953 aaKnown RBP eCLIP11.3□□□□□ -0.6
PEX1-210ENST00000496420 RTF1Q92541 710 aaKnown RBP11.3□□□□□ -0.6
PEX1-210ENST00000496420 GTF2E1P29083 439 aaPredicted RBP11.29□□□□□ -0.6
PEX1-210ENST00000496420 DIEXFQ68CQ4 756 aaKnown RBP11.29□□□□□ -0.6
PEX1-210ENST00000496420 KLHL34Q8N239 644 aa11.29□□□□□ -0.6
PEX1-210ENST00000496420 ZNF330Q9Y3S2 320 aaPredicted RBP11.28□□□□□ -0.6
PEX1-210ENST00000496420 RTL5Q5HYW3 569 aaPredicted RBP11.28□□□□□ -0.6
PEX1-210ENST00000496420 SALL2Q9Y467 1007 aaPredicted RBP11.26□□□□□ -0.61
PEX1-210ENST00000496420 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.26□□□□□ -0.61
PEX1-210ENST00000496420 HMGB2P26583 209 aaKnown RBP11.25□□□□□ -0.61
PEX1-210ENST00000496420 FANCD2Q9BXW9 1451 aa11.25□□□□□ -0.61
PEX1-210ENST00000496420 DMRT2Q9Y5R5 561 aa11.25□□□□□ -0.61
PEX1-210ENST00000496420 U2SURPO15042 1029 aaKnown RBP11.24□□□□□ -0.61
PEX1-210ENST00000496420 LAS1LQ9Y4W2 734 aaKnown RBP11.24□□□□□ -0.61
PEX1-210ENST00000496420 ISY1Q9ULR0 285 aaKnown RBP11.24□□□□□ -0.61
PEX1-210ENST00000496420 FMN1Q68DA7 1419 aa11.24□□□□□ -0.61
PEX1-210ENST00000496420 TMF1P82094 1093 aa11.24□□□□□ -0.61
PEX1-210ENST00000496420 CHMP4BQ9H444 224 aaKnown RBP11.24□□□□□ -0.61
PEX1-210ENST00000496420 WASHC2AQ641Q2 1341 aa11.24□□□□□ -0.61
PEX1-210ENST00000496420 OS9Q13438 667 aaPredicted RBP11.23□□□□□ -0.61
PEX1-210ENST00000496420 POGZQ7Z3K3 1410 aa11.23□□□□□ -0.61
PEX1-210ENST00000496420 CEP162Q5TB80 1403 aa11.23□□□□□ -0.61
PEX1-210ENST00000496420 ANKRD30AQ9BXX3 1397 aa11.23□□□□□ -0.61
PEX1-210ENST00000496420 FAM9BQ8IZU0 186 aa11.21□□□□□ -0.61
PEX1-210ENST00000496420 DCAF11Q8TEB1 546 aa11.21□□□□□ -0.62
PEX1-210ENST00000496420 TERF2IPQ9NYB0 399 aa11.2□□□□□ -0.62
PEX1-210ENST00000496420 AMPHP49418 695 aa11.19□□□□□ -0.62
PEX1-210ENST00000496420 EIF5BO60841 1220 aaKnown RBP11.19□□□□□ -0.62
PEX1-210ENST00000496420 TNNT2P45379 298 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 1027.3 ms