RNA–Protein interactions for RNA: ENST00000496183.5

RBM39-241, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 632 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-241ENST00000496183 GSE1Q14687 1217 aa13.95□□□□□ -0.18
RBM39-241ENST00000496183 ZNF579Q8NAF0 562 aaKnown RBP13.95□□□□□ -0.18
RBM39-241ENST00000496183 DCAF8Q5TAQ9 597 aa13.94□□□□□ -0.18
RBM39-241ENST00000496183 GABBR2O75899 941 aa13.88□□□□□ -0.19
RBM39-241ENST00000496183 CCDC61Q9Y6R9 512 aa13.86□□□□□ -0.19
RBM39-241ENST00000496183 CIZ1Q9ULV3 898 aaPredicted RBP13.85□□□□□ -0.19
RBM39-241ENST00000496183 PHF12Q96QT6 1004 aa13.82□□□□□ -0.2
RBM39-241ENST00000496183 TRIM41Q8WV44 630 aa13.79□□□□□ -0.2
RBM39-241ENST00000496183 SGIP1Q9BQI5 828 aa13.75□□□□□ -0.21
RBM39-241ENST00000496183 KIF12Q96FN5 646 aa13.73□□□□□ -0.21
RBM39-241ENST00000496183 PYGBP11216 843 aa13.71□□□□□ -0.21
RBM39-241ENST00000496183 PCDHB13Q9Y5F0 798 aa13.71□□□□□ -0.21
RBM39-241ENST00000496183 MAP3K13O43283 966 aa13.69□□□□□ -0.22
RBM39-241ENST00000496183 CHRM1P11229 460 aaPredicted RBP13.68□□□□□ -0.22
RBM39-241ENST00000496183 DCBLD2Q96PD2 775 aa13.68□□□□□ -0.22
RBM39-241ENST00000496183 MS4A3Q96HJ5 214 aa13.67□□□□□ -0.22
RBM39-241ENST00000496183 GALR2O43603 387 aaPredicted RBP13.66□□□□□ -0.22
RBM39-241ENST00000496183 ZNF467Q7Z7K2 595 aaPredicted RBP13.65□□□□□ -0.22
RBM39-241ENST00000496183 LHX8Q68G74 356 aa13.64□□□□□ -0.23
RBM39-241ENST00000496183 POTEIP0CG38 1075 aa13.62□□□□□ -0.23
RBM39-241ENST00000496183 ECM2O94769 699 aaPredicted RBP13.57□□□□□ -0.24
RBM39-241ENST00000496183 IFNL1Q8IU54 200 aa13.56□□□□□ -0.24
RBM39-241ENST00000496183 TAOK2Q9UL54 1235 aa13.56□□□□□ -0.24
RBM39-241ENST00000496183 TIE1P35590 1138 aa13.55□□□□□ -0.24
RBM39-241ENST00000496183 PCDHB8Q9UN66 801 aa13.51□□□□□ -0.25
RBM39-241ENST00000496183 PKD2Q13563 968 aa13.48□□□□□ -0.25
RBM39-241ENST00000496183 RIOK3O14730 519 aaKnown RBP13.47□□□□□ -0.25
RBM39-241ENST00000496183 PDAP1Q13442 181 aaKnown RBP13.47□□□□□ -0.25
RBM39-241ENST00000496183 AMER1Q5JTC6 1135 aaPredicted RBP13.47□□□□□ -0.25
RBM39-241ENST00000496183 ASTLQ6HA08 431 aaPredicted RBP13.47□□□□□ -0.25
RBM39-241ENST00000496183 TMEM106CQ9BVX2 250 aa13.45□□□□□ -0.26
RBM39-241ENST00000496183 BMP2KQ9NSY1 1161 aaPredicted RBP13.45□□□□□ -0.26
RBM39-241ENST00000496183 ATMINO43313 823 aaPredicted RBP13.44□□□□□ -0.26
RBM39-241ENST00000496183 TTLL13PA6NNM8 815 aa13.42□□□□□ -0.26
RBM39-241ENST00000496183 VGFO15240 615 aaPredicted RBP13.42□□□□□ -0.26
RBM39-241ENST00000496183 PSEN1P49768 467 aa13.42□□□□□ -0.26
RBM39-241ENST00000496183 GOLGA2Q08379 1002 aa13.42□□□□□ -0.26
RBM39-241ENST00000496183 TRPC6Q9Y210 931 aa13.42□□□□□ -0.26
RBM39-241ENST00000496183 SLC39A7Q92504 469 aa13.39□□□□□ -0.27
RBM39-241ENST00000496183 ATN1P54259 1190 aaPredicted RBP13.38□□□□□ -0.27
RBM39-241ENST00000496183 TRIM35Q9UPQ4 493 aa13.36□□□□□ -0.27
RBM39-241ENST00000496183 C7P10643 843 aa13.35□□□□□ -0.27
RBM39-241ENST00000496183 RNF25Q96BH1 459 aaPredicted RBP13.35□□□□□ -0.27
RBM39-241ENST00000496183 RGL2O15211 777 aa13.33□□□□□ -0.28
RBM39-241ENST00000496183 IER5LQ5T953 404 aa13.33□□□□□ -0.28
RBM39-241ENST00000496183 MKRN3Q13064 507 aaKnown RBP13.31□□□□□ -0.28
RBM39-241ENST00000496183 METRNQ9UJH8 293 aa13.3□□□□□ -0.28
RBM39-241ENST00000496183 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.29□□□□□ -0.28
RBM39-241ENST00000496183 SEC24BO95487 1268 aa13.29□□□□□ -0.28
RBM39-241ENST00000496183 ZFP91Q96JP5 570 aaPredicted RBP13.29□□□□□ -0.28
RBM39-241ENST00000496183 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.29
RBM39-241ENST00000496183 STK25O00506 426 aa13.26□□□□□ -0.29
RBM39-241ENST00000496183 CABP2Q9NPB3 220 aa13.26□□□□□ -0.29
RBM39-241ENST00000496183 DCAF8L2P0C7V8 631 aa13.25□□□□□ -0.29
RBM39-241ENST00000496183 PLCG2P16885 1265 aa13.22□□□□□ -0.29
RBM39-241ENST00000496183 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
RBM39-241ENST00000496183 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
RBM39-241ENST00000496183 STK24Q9Y6E0 443 aa13.22□□□□□ -0.29
RBM39-241ENST00000496183 POTEB2H3BUK9 544 aa13.18□□□□□ -0.3
RBM39-241ENST00000496183 OCEL1Q9H607 264 aa13.17□□□□□ -0.3
RBM39-241ENST00000496183 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.15□□□□□ -0.35e-51■■■■□ 20.4
RBM39-241ENST00000496183 SOX12O15370 315 aa13.14□□□□□ -0.31
RBM39-241ENST00000496183 CHGAP10645 457 aaKnown RBP13.14□□□□□ -0.31
RBM39-241ENST00000496183 HS6ST3Q8IZP7 471 aa13.14□□□□□ -0.31
RBM39-241ENST00000496183 OTUD5Q96G74 571 aa13.14□□□□□ -0.31
RBM39-241ENST00000496183 IRX5P78411 483 aaPredicted RBP13.13□□□□□ -0.31
RBM39-241ENST00000496183 EFCAB3Q8N7B9 438 aa13.13□□□□□ -0.31
RBM39-241ENST00000496183 MAMSTRQ6ZN01 415 aa13.1□□□□□ -0.31
RBM39-241ENST00000496183 G3V3G9 751 aa13.09□□□□□ -0.31
RBM39-241ENST00000496183 COLQQ9Y215 455 aaPredicted RBP13.08□□□□□ -0.32
RBM39-241ENST00000496183 NLRP6P59044 892 aa13.07□□□□□ -0.32
RBM39-241ENST00000496183 L3MBTL3Q96JM7 780 aaPredicted RBP13.06□□□□□ -0.32
RBM39-241ENST00000496183 SCUBE2Q9NQ36 999 aa13.05□□□□□ -0.32
RBM39-241ENST00000496183 RYDENQ9NUL5 291 aaKnown RBP13.04□□□□□ -0.32
RBM39-241ENST00000496183 POTEFA5A3E0 1075 aa13.03□□□□□ -0.32
RBM39-241ENST00000496183 PDCD7Q8N8D1 485 aaKnown RBP13.02□□□□□ -0.33
RBM39-241ENST00000496183 ILDR1Q86SU0 546 aaPredicted RBP13.01□□□□□ -0.33
RBM39-241ENST00000496183 DNAJC5Q9H3Z4 198 aa12.99□□□□□ -0.33
RBM39-241ENST00000496183 PHF8Q9UPP1 1060 aa12.99□□□□□ -0.33
RBM39-241ENST00000496183 C3orf67Q6ZVT6 689 aa12.96□□□□□ -0.33
RBM39-241ENST00000496183 POTEJP0CG39 1038 aa12.95□□□□□ -0.34
RBM39-241ENST00000496183 MFRPQ9BY79 579 aa12.94□□□□□ -0.34
RBM39-241ENST00000496183 PLSCR2Q9NRY7 297 aa12.93□□□□□ -0.34
RBM39-241ENST00000496183 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.93□□□□□ -0.34
RBM39-241ENST00000496183 BOLA1Q9Y3E2 137 aa12.93□□□□□ -0.34
RBM39-241ENST00000496183 FBXO22Q8NEZ5 403 aa12.91□□□□□ -0.34
RBM39-241ENST00000496183 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.89□□□□□ -0.35
RBM39-241ENST00000496183 DPY19L2Q6NUT2 758 aa12.88□□□□□ -0.35
RBM39-241ENST00000496183 BBXQ8WY36 941 aaPredicted RBP12.88□□□□□ -0.35
RBM39-241ENST00000496183 MS4A4AQ96JQ5 239 aa12.87□□□□□ -0.35
RBM39-241ENST00000496183 POTEMA6NI47 508 aa12.84□□□□□ -0.35
RBM39-241ENST00000496183 NKX1-1Q15270 411 aaPredicted RBP12.82□□□□□ -0.36
RBM39-241ENST00000496183 MICALL2Q8IY33 904 aa12.82□□□□□ -0.36
RBM39-241ENST00000496183 SLAIN1Q8ND83 568 aa12.82□□□□□ -0.36
RBM39-241ENST00000496183 POTEGQ6S5H5 508 aa12.8□□□□□ -0.36
RBM39-241ENST00000496183 TMEM121BQ9BXQ6 578 aaPredicted RBP12.8□□□□□ -0.36
RBM39-241ENST00000496183 SNPHO15079 494 aa12.73□□□□□ -0.37
RBM39-241ENST00000496183 GTPBP6O43824 516 aaPredicted RBP12.73□□□□□ -0.37
RBM39-241ENST00000496183 SPRYD3Q8NCJ5 442 aa12.73□□□□□ -0.37
RBM39-241ENST00000496183 LCE2DQ5TA82 110 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms