RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 CLCN6P51797 869 aa15.16■□□□□ 0.02
NCKAP1-208ENST00000495619 ZNF579Q8NAF0 562 aaKnown RBP15.14■□□□□ 0.01
NCKAP1-208ENST00000495619 TRIM41Q8WV44 630 aa15.13■□□□□ 0.01
NCKAP1-208ENST00000495619 EVX2Q03828 476 aa15.12■□□□□ 0.01
NCKAP1-208ENST00000495619 CCDC61Q9Y6R9 512 aa15.12■□□□□ 0.01
NCKAP1-208ENST00000495619 SP7Q8TDD2 431 aaPredicted RBP15.07■□□□□ 0
NCKAP1-208ENST00000495619 PHF12Q96QT6 1004 aa15.04■□□□□ -0
NCKAP1-208ENST00000495619 PYGBP11216 843 aa15.02■□□□□ -0
NCKAP1-208ENST00000495619 CHRM1P11229 460 aaPredicted RBP15.02■□□□□ -0
NCKAP1-208ENST00000495619 AMER1Q5JTC6 1135 aaPredicted RBP15.02■□□□□ -0
NCKAP1-208ENST00000495619 KIF12Q96FN5 646 aa14.99□□□□□ -0.01
NCKAP1-208ENST00000495619 SGIP1Q9BQI5 828 aa14.99□□□□□ -0.01
NCKAP1-208ENST00000495619 ECM2O94769 699 aaPredicted RBP14.97□□□□□ -0.01
NCKAP1-208ENST00000495619 PCDHB13Q9Y5F0 798 aa14.96□□□□□ -0.01
NCKAP1-208ENST00000495619 GABBR2O75899 941 aa14.95□□□□□ -0.02
NCKAP1-208ENST00000495619 MAP3K13O43283 966 aa14.94□□□□□ -0.02
NCKAP1-208ENST00000495619 PKD2Q13563 968 aa14.92□□□□□ -0.02
NCKAP1-208ENST00000495619 ZNF467Q7Z7K2 595 aaPredicted RBP14.92□□□□□ -0.02
NCKAP1-208ENST00000495619 TAOK2Q9UL54 1235 aa14.88□□□□□ -0.03
NCKAP1-208ENST00000495619 MS4A3Q96HJ5 214 aa14.87□□□□□ -0.03
NCKAP1-208ENST00000495619 GALR2O43603 387 aaPredicted RBP14.84□□□□□ -0.03
NCKAP1-208ENST00000495619 IFNL1Q8IU54 200 aa14.83□□□□□ -0.04
NCKAP1-208ENST00000495619 DCBLD2Q96PD2 775 aa14.82□□□□□ -0.04
NCKAP1-208ENST00000495619 RIOK3O14730 519 aaKnown RBP14.8□□□□□ -0.04
NCKAP1-208ENST00000495619 RTN4Q9NQC3 1192 aaKnown RBP14.8□□□□□ -0.04
NCKAP1-208ENST00000495619 PCDHB8Q9UN66 801 aa14.8□□□□□ -0.04
NCKAP1-208ENST00000495619 PDAP1Q13442 181 aaKnown RBP14.75□□□□□ -0.05
NCKAP1-208ENST00000495619 TIE1P35590 1138 aa14.74□□□□□ -0.05
NCKAP1-208ENST00000495619 VGFO15240 615 aaPredicted RBP14.73□□□□□ -0.05
NCKAP1-208ENST00000495619 RGL2O15211 777 aa14.72□□□□□ -0.05
NCKAP1-208ENST00000495619 PSEN1P49768 467 aa14.7□□□□□ -0.06
NCKAP1-208ENST00000495619 RNF25Q96BH1 459 aaPredicted RBP14.69□□□□□ -0.06
NCKAP1-208ENST00000495619 DCAF8L2P0C7V8 631 aa14.68□□□□□ -0.06
NCKAP1-208ENST00000495619 TMEM106CQ9BVX2 250 aa14.68□□□□□ -0.06
NCKAP1-208ENST00000495619 BMP2KQ9NSY1 1161 aaPredicted RBP14.64□□□□□ -0.07
NCKAP1-208ENST00000495619 TRPC6Q9Y210 931 aa14.64□□□□□ -0.07
NCKAP1-208ENST00000495619 GOLGA2Q08379 1002 aa14.63□□□□□ -0.07
NCKAP1-208ENST00000495619 ASTLQ6HA08 431 aaPredicted RBP14.63□□□□□ -0.07
NCKAP1-208ENST00000495619 TTLL13PA6NNM8 815 aa14.62□□□□□ -0.07
NCKAP1-208ENST00000495619 ATMINO43313 823 aaPredicted RBP14.61□□□□□ -0.07
NCKAP1-208ENST00000495619 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.59□□□□□ -0.07
NCKAP1-208ENST00000495619 ZFP91Q96JP5 570 aaPredicted RBP14.59□□□□□ -0.07
NCKAP1-208ENST00000495619 STK25O00506 426 aa14.57□□□□□ -0.08
NCKAP1-208ENST00000495619 ATN1P54259 1190 aaPredicted RBP14.56□□□□□ -0.08
NCKAP1-208ENST00000495619 TRIM35Q9UPQ4 493 aa14.55□□□□□ -0.08
NCKAP1-208ENST00000495619 STK24Q9Y6E0 443 aa14.54□□□□□ -0.08
NCKAP1-208ENST00000495619 POTEIP0CG38 1075 aa14.53□□□□□ -0.08
NCKAP1-208ENST00000495619 MKRN3Q13064 507 aaKnown RBP14.53□□□□□ -0.08
NCKAP1-208ENST00000495619 BCL11BQ9C0K0 894 aaPredicted RBP14.53□□□□□ -0.08
NCKAP1-208ENST00000495619 CHGAP10645 457 aaKnown RBP14.52□□□□□ -0.09
NCKAP1-208ENST00000495619 SLC39A7Q92504 469 aa14.52□□□□□ -0.09
NCKAP1-208ENST00000495619 CABP2Q9NPB3 220 aa14.51□□□□□ -0.09
NCKAP1-208ENST00000495619 C7P10643 843 aa14.5□□□□□ -0.09
NCKAP1-208ENST00000495619 IER5LQ5T953 404 aa14.49□□□□□ -0.09
NCKAP1-208ENST00000495619 HS6ST3Q8IZP7 471 aa14.47□□□□□ -0.09
NCKAP1-208ENST00000495619 SEC24BO95487 1268 aa14.44□□□□□ -0.1
NCKAP1-208ENST00000495619 PELP1Q8IZL8 1130 aaKnown RBP14.44□□□□□ -0.1
NCKAP1-208ENST00000495619 METRNQ9UJH8 293 aa14.42□□□□□ -0.1
NCKAP1-208ENST00000495619 SOX12O15370 315 aa14.4□□□□□ -0.1
NCKAP1-208ENST00000495619 EFCAB3Q8N7B9 438 aa14.4□□□□□ -0.1
NCKAP1-208ENST00000495619 PLCG2P16885 1265 aa14.38□□□□□ -0.11
NCKAP1-208ENST00000495619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.37□□□□□ -0.119e-11■□□□□ 10.3
NCKAP1-208ENST00000495619 OCEL1Q9H607 264 aa14.35□□□□□ -0.11
NCKAP1-208ENST00000495619 RYDENQ9NUL5 291 aaKnown RBP14.33□□□□□ -0.12
NCKAP1-208ENST00000495619 NLRP6P59044 892 aa14.32□□□□□ -0.12
NCKAP1-208ENST00000495619 DNAJC5Q9H3Z4 198 aa14.32□□□□□ -0.12
NCKAP1-208ENST00000495619 IRX5P78411 483 aaPredicted RBP14.31□□□□□ -0.12
NCKAP1-208ENST00000495619 BBXQ8WY36 941 aaPredicted RBP14.29□□□□□ -0.12
NCKAP1-208ENST00000495619 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.29□□□□□ -0.12
NCKAP1-208ENST00000495619 G3V3G9 751 aa14.25□□□□□ -0.13
NCKAP1-208ENST00000495619 PHF8Q9UPP1 1060 aa14.25□□□□□ -0.13
NCKAP1-208ENST00000495619 COLQQ9Y215 455 aaPredicted RBP14.25□□□□□ -0.13
NCKAP1-208ENST00000495619 L3MBTL3Q96JM7 780 aaPredicted RBP14.23□□□□□ -0.13
NCKAP1-208ENST00000495619 ILDR1Q86SU0 546 aaPredicted RBP14.22□□□□□ -0.13
NCKAP1-208ENST00000495619 MFRPQ9BY79 579 aa14.22□□□□□ -0.13
NCKAP1-208ENST00000495619 PDCD7Q8N8D1 485 aaKnown RBP14.19□□□□□ -0.14
NCKAP1-208ENST00000495619 POTEFA5A3E0 1075 aa14.18□□□□□ -0.14
NCKAP1-208ENST00000495619 MAMSTRQ6ZN01 415 aa14.17□□□□□ -0.14
NCKAP1-208ENST00000495619 FBXO22Q8NEZ5 403 aa14.17□□□□□ -0.14
NCKAP1-208ENST00000495619 NKX1-1Q15270 411 aaPredicted RBP14.16□□□□□ -0.14
NCKAP1-208ENST00000495619 LHX8Q68G74 356 aa14.16□□□□□ -0.14
NCKAP1-208ENST00000495619 SPRYD3Q8NCJ5 442 aa14.13□□□□□ -0.15
NCKAP1-208ENST00000495619 BOLA1Q9Y3E2 137 aa14.12□□□□□ -0.15
NCKAP1-208ENST00000495619 DPY19L2Q6NUT2 758 aa14.11□□□□□ -0.15
NCKAP1-208ENST00000495619 MS4A4AQ96JQ5 239 aa14.11□□□□□ -0.15
NCKAP1-208ENST00000495619 SCUBE2Q9NQ36 999 aa14.11□□□□□ -0.15
NCKAP1-208ENST00000495619 C3orf67Q6ZVT6 689 aa14.08□□□□□ -0.16
NCKAP1-208ENST00000495619 GTPBP6O43824 516 aaPredicted RBP14.07□□□□□ -0.16
NCKAP1-208ENST00000495619 POTEB2H3BUK9 544 aa14.05□□□□□ -0.16
NCKAP1-208ENST00000495619 PAXIP1Q6ZW49 1069 aaPredicted RBP14.05□□□□□ -0.16
NCKAP1-208ENST00000495619 CFAP44Q96MT7 982 aa14.05□□□□□ -0.16
NCKAP1-208ENST00000495619 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.04□□□□□ -0.16
NCKAP1-208ENST00000495619 MICALL2Q8IY33 904 aa14.01□□□□□ -0.17
NCKAP1-208ENST00000495619 TMEM121BQ9BXQ6 578 aaPredicted RBP13.99□□□□□ -0.17
NCKAP1-208ENST00000495619 PPP1R37O75864 691 aa13.98□□□□□ -0.17
NCKAP1-208ENST00000495619 POTEJP0CG39 1038 aa13.96□□□□□ -0.17
NCKAP1-208ENST00000495619 SLAIN1Q8ND83 568 aa13.91□□□□□ -0.18
NCKAP1-208ENST00000495619 OTUD5Q96G74 571 aa13.91□□□□□ -0.18
NCKAP1-208ENST00000495619 PLCB2Q00722 1185 aa13.89□□□□□ -0.19
NCKAP1-208ENST00000495619 TMC2Q8TDI7 906 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms