RNA–Protein interactions for RNA: ENST00000495198.6

SREK1IP1-201, Transcript of SREK1 interacting protein 1, humanhuman

TSL 3

Gene SREK1IP1, Length 816 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1-201ENST00000495198 TSPYL2Q9H2G4 693 aaPredicted RBP18.5■□□□□ 0.55
SREK1IP1-201ENST00000495198 POTEJP0CG39 1038 aa18.47■□□□□ 0.55
SREK1IP1-201ENST00000495198 METRNQ9UJH8 293 aa18.41■□□□□ 0.54
SREK1IP1-201ENST00000495198 TRPC6Q9Y210 931 aa18.4■□□□□ 0.54
SREK1IP1-201ENST00000495198 KIF12Q96FN5 646 aa18.39■□□□□ 0.53
SREK1IP1-201ENST00000495198 RASEFQ8IZ41 740 aa18.36■□□□□ 0.53
SREK1IP1-201ENST00000495198 ATN1P54259 1190 aaPredicted RBP18.34■□□□□ 0.53
SREK1IP1-201ENST00000495198 SLC39A7Q92504 469 aa18.31■□□□□ 0.52
SREK1IP1-201ENST00000495198 C7P10643 843 aa18.29■□□□□ 0.52
SREK1IP1-201ENST00000495198 BMP2KQ9NSY1 1161 aaPredicted RBP18.29■□□□□ 0.52
SREK1IP1-201ENST00000495198 POTEFA5A3E0 1075 aa18.28■□□□□ 0.52
SREK1IP1-201ENST00000495198 MAP3K13O43283 966 aa18.27■□□□□ 0.52
SREK1IP1-201ENST00000495198 MIER1Q8N108 512 aa18.27■□□□□ 0.52
SREK1IP1-201ENST00000495198 PLSCR2Q9NRY7 297 aa18.18■□□□□ 0.5
SREK1IP1-201ENST00000495198 POTEMA6NI47 508 aa18.16■□□□□ 0.5
SREK1IP1-201ENST00000495198 LCE2DQ5TA82 110 aaPredicted RBP18.15■□□□□ 0.5
SREK1IP1-201ENST00000495198 NUBP1P53384 320 aa18.13■□□□□ 0.49
SREK1IP1-201ENST00000495198 TIE1P35590 1138 aa18.11■□□□□ 0.49
SREK1IP1-201ENST00000495198 POTEGQ6S5H5 508 aa18.11■□□□□ 0.49
SREK1IP1-201ENST00000495198 TTLL13PA6NNM8 815 aa18.09■□□□□ 0.49
SREK1IP1-201ENST00000495198 PLEKHG5O94827 1062 aa18.08■□□□□ 0.48
SREK1IP1-201ENST00000495198 PLCD3Q8N3E9 789 aa18.07■□□□□ 0.48
SREK1IP1-201ENST00000495198 COLQQ9Y215 455 aaPredicted RBP18.07■□□□□ 0.48
SREK1IP1-201ENST00000495198 MAMSTRQ6ZN01 415 aa18.01■□□□□ 0.47
SREK1IP1-201ENST00000495198 FKBP8Q14318 412 aa17.99■□□□□ 0.47
SREK1IP1-201ENST00000495198 PCDHB13Q9Y5F0 798 aa17.96■□□□□ 0.47
SREK1IP1-201ENST00000495198 IFNL1Q8IU54 200 aa17.95■□□□□ 0.46
SREK1IP1-201ENST00000495198 SCUBE2Q9NQ36 999 aa17.94■□□□□ 0.46
SREK1IP1-201ENST00000495198 TRIM35Q9UPQ4 493 aa17.94■□□□□ 0.46
SREK1IP1-201ENST00000495198 SGIP1Q9BQI5 828 aa17.93■□□□□ 0.46
SREK1IP1-201ENST00000495198 FAM163AQ96GL9 167 aaPredicted RBP17.86■□□□□ 0.45
SREK1IP1-201ENST00000495198 ZBTB47Q9UFB7 747 aaPredicted RBP17.85■□□□□ 0.45
SREK1IP1-201ENST00000495198 IER5LQ5T953 404 aa17.82■□□□□ 0.44
SREK1IP1-201ENST00000495198 SEC24BO95487 1268 aa17.81■□□□□ 0.44
SREK1IP1-201ENST00000495198 FAM212AQ96EL1 285 aa17.81■□□□□ 0.44
SREK1IP1-201ENST00000495198 TMEM106CQ9BVX2 250 aa17.79■□□□□ 0.44
SREK1IP1-201ENST00000495198 IRX5P78411 483 aaPredicted RBP17.71■□□□□ 0.43
SREK1IP1-201ENST00000495198 PYGBP11216 843 aa17.7■□□□□ 0.42
SREK1IP1-201ENST00000495198 PCDH10Q9P2E7 1040 aa17.7■□□□□ 0.42
SREK1IP1-201ENST00000495198 PCDHB8Q9UN66 801 aa17.65■□□□□ 0.42
SREK1IP1-201ENST00000495198 DCAF8Q5TAQ9 597 aa17.64■□□□□ 0.41
SREK1IP1-201ENST00000495198 PLCG2P16885 1265 aa17.59■□□□□ 0.41
SREK1IP1-201ENST00000495198 SLAIN1Q8ND83 568 aa17.59■□□□□ 0.41
SREK1IP1-201ENST00000495198 ST18O60284 1047 aa17.53■□□□□ 0.4
SREK1IP1-201ENST00000495198 VASPP50552 380 aaPredicted RBP17.52■□□□□ 0.4
SREK1IP1-201ENST00000495198 FBXO3Q9UK99 471 aa17.52■□□□□ 0.4
SREK1IP1-201ENST00000495198 OCEL1Q9H607 264 aa17.51■□□□□ 0.39
SREK1IP1-201ENST00000495198 CDAN1Q8IWY9 1227 aa17.46■□□□□ 0.39
SREK1IP1-201ENST00000495198 PDCD7Q8N8D1 485 aaKnown RBP17.45■□□□□ 0.38
SREK1IP1-201ENST00000495198 KLHL34Q8N239 644 aa17.36■□□□□ 0.37
SREK1IP1-201ENST00000495198 GSE1Q14687 1217 aa17.35■□□□□ 0.37
SREK1IP1-201ENST00000495198 CHRM1P11229 460 aaPredicted RBP17.34■□□□□ 0.37
SREK1IP1-201ENST00000495198 ZNF467Q7Z7K2 595 aaPredicted RBP17.32■□□□□ 0.36
SREK1IP1-201ENST00000495198 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.29■□□□□ 0.36
SREK1IP1-201ENST00000495198 PSEN1P49768 467 aa17.27■□□□□ 0.36
SREK1IP1-201ENST00000495198 ILDR1Q86SU0 546 aaPredicted RBP17.25■□□□□ 0.35
SREK1IP1-201ENST00000495198 IFNLR1Q8IU57 520 aaPredicted RBP17.25■□□□□ 0.35
SREK1IP1-201ENST00000495198 MARVELD3Q96A59 401 aa17.23■□□□□ 0.35
SREK1IP1-201ENST00000495198 MKRN3Q13064 507 aaKnown RBP17.2■□□□□ 0.34
SREK1IP1-201ENST00000495198 TMEM121BQ9BXQ6 578 aaPredicted RBP17.2■□□□□ 0.34
SREK1IP1-201ENST00000495198 DPY19L2Q6NUT2 758 aa17.18■□□□□ 0.34
SREK1IP1-201ENST00000495198 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.18■□□□□ 0.34
SREK1IP1-201ENST00000495198 SNPHO15079 494 aa17.13■□□□□ 0.33
SREK1IP1-201ENST00000495198 POTEB3A0JP26 581 aa17.12■□□□□ 0.33
SREK1IP1-201ENST00000495198 GOLGA2Q08379 1002 aa17.12■□□□□ 0.33
SREK1IP1-201ENST00000495198 PDAP1Q13442 181 aaKnown RBP17.12■□□□□ 0.33
SREK1IP1-201ENST00000495198 POTEBQ6S5H4 581 aa17.12■□□□□ 0.33
SREK1IP1-201ENST00000495198 C3orf67Q6ZVT6 689 aa17.12■□□□□ 0.33
SREK1IP1-201ENST00000495198 SPOCK2Q92563 424 aa17.11■□□□□ 0.33
SREK1IP1-201ENST00000495198 L3MBTL3Q96JM7 780 aaPredicted RBP17.11■□□□□ 0.33
SREK1IP1-201ENST00000495198 SPNS2Q8IVW8 549 aa17.09■□□□□ 0.33
SREK1IP1-201ENST00000495198 CABP2Q9NPB3 220 aa17.07■□□□□ 0.32
SREK1IP1-201ENST00000495198 MMRN1Q13201 1228 aa17.06■□□□□ 0.32
SREK1IP1-201ENST00000495198 CIZ1Q9ULV3 898 aaPredicted RBP17.06■□□□□ 0.32
SREK1IP1-201ENST00000495198 EMP3P54852 163 aa16.98■□□□□ 0.31
SREK1IP1-201ENST00000495198 KRTAP3-3Q9BYR6 98 aa16.98■□□□□ 0.31
SREK1IP1-201ENST00000495198 KRTAP3-2Q9BYR7 98 aa16.98■□□□□ 0.31
SREK1IP1-201ENST00000495198 HOXB3P14651 431 aaPredicted RBP16.97■□□□□ 0.31
SREK1IP1-201ENST00000495198 BOLA1Q9Y3E2 137 aa16.95■□□□□ 0.3
SREK1IP1-201ENST00000495198 HS3ST6Q96QI5 342 aa16.94■□□□□ 0.3
SREK1IP1-201ENST00000495198 FAM205CA6NFA0 338 aa16.9■□□□□ 0.3
SREK1IP1-201ENST00000495198 EFCAB3Q8N7B9 438 aa16.88■□□□□ 0.29
SREK1IP1-201ENST00000495198 RNF25Q96BH1 459 aaPredicted RBP16.83■□□□□ 0.28
SREK1IP1-201ENST00000495198 TMEM92Q6UXU6 159 aa16.81■□□□□ 0.28
SREK1IP1-201ENST00000495198 MS4A4AQ96JQ5 239 aa16.76■□□□□ 0.27
SREK1IP1-201ENST00000495198 HOXB1P14653 301 aaPredicted RBP16.75■□□□□ 0.27
SREK1IP1-201ENST00000495198 TRIM41Q8WV44 630 aa16.73■□□□□ 0.27
SREK1IP1-201ENST00000495198 G3V3G9 751 aa16.72■□□□□ 0.27
SREK1IP1-201ENST00000495198 MICALL2Q8IY33 904 aa16.72■□□□□ 0.27
SREK1IP1-201ENST00000495198 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.67■□□□□ 0.26
SREK1IP1-201ENST00000495198 ZFP91Q96JP5 570 aaPredicted RBP16.67■□□□□ 0.26
SREK1IP1-201ENST00000495198 RIOK3O14730 519 aaKnown RBP16.65■□□□□ 0.26
SREK1IP1-201ENST00000495198 DOK7Q18PE1 504 aa16.64■□□□□ 0.25
SREK1IP1-201ENST00000495198 PHF8Q9UPP1 1060 aa16.64■□□□□ 0.25
SREK1IP1-201ENST00000495198 ZNF710Q8N1W2 664 aa16.63■□□□□ 0.25
SREK1IP1-201ENST00000495198 ERBB3P21860 1342 aa16.57■□□□□ 0.24
SREK1IP1-201ENST00000495198 SOX12O15370 315 aa16.57■□□□□ 0.24
SREK1IP1-201ENST00000495198 VARS2Q5ST30 1063 aaKnown RBP16.55■□□□□ 0.24
SREK1IP1-201ENST00000495198 VGFO15240 615 aaPredicted RBP16.54■□□□□ 0.24
SREK1IP1-201ENST00000495198 GPR153Q6NV75 609 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms