RNA–Protein interactions for RNA: ENST00000495083.1

MDH1-214, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-214ENST00000495083 CCDC61Q9Y6R9 512 aa15.23■□□□□ 0.03
MDH1-214ENST00000495083 METRNQ9UJH8 293 aa15.18■□□□□ 0.02
MDH1-214ENST00000495083 KIF12Q96FN5 646 aa15.16■□□□□ 0.02
MDH1-214ENST00000495083 POTEJP0CG39 1038 aa15.15■□□□□ 0.02
MDH1-214ENST00000495083 C7P10643 843 aa15.15■□□□□ 0.02
MDH1-214ENST00000495083 SLC39A7Q92504 469 aa15.15■□□□□ 0.02
MDH1-214ENST00000495083 ATN1P54259 1190 aaPredicted RBP15.11■□□□□ 0.01
MDH1-214ENST00000495083 MIER1Q8N108 512 aa15.11■□□□□ 0.01
MDH1-214ENST00000495083 RASEFQ8IZ41 740 aa15.09■□□□□ 0.01
MDH1-214ENST00000495083 TRPC6Q9Y210 931 aa15.07■□□□□ 0
MDH1-214ENST00000495083 PLSCR2Q9NRY7 297 aa15.06■□□□□ 0
MDH1-214ENST00000495083 MAP3K13O43283 966 aa15.05■□□□□ -0
MDH1-214ENST00000495083 BMP2KQ9NSY1 1161 aaPredicted RBP15.04■□□□□ -0
MDH1-214ENST00000495083 PLEKHG5O94827 1062 aa15.03■□□□□ -0
MDH1-214ENST00000495083 POTEFA5A3E0 1075 aa15□□□□□ -0.01
MDH1-214ENST00000495083 POTEMA6NI47 508 aa15□□□□□ -0.01
MDH1-214ENST00000495083 MAMSTRQ6ZN01 415 aa14.97□□□□□ -0.01
MDH1-214ENST00000495083 TIE1P35590 1138 aa14.96□□□□□ -0.01
MDH1-214ENST00000495083 POTEGQ6S5H5 508 aa14.96□□□□□ -0.01
MDH1-214ENST00000495083 PLCD3Q8N3E9 789 aa14.94□□□□□ -0.02
MDH1-214ENST00000495083 TTLL13PA6NNM8 815 aa14.9□□□□□ -0.02
MDH1-214ENST00000495083 NUBP1P53384 320 aa14.9□□□□□ -0.02
MDH1-214ENST00000495083 LCE2DQ5TA82 110 aaPredicted RBP14.88□□□□□ -0.03
MDH1-214ENST00000495083 SCUBE2Q9NQ36 999 aa14.86□□□□□ -0.03
MDH1-214ENST00000495083 COLQQ9Y215 455 aaPredicted RBP14.86□□□□□ -0.03
MDH1-214ENST00000495083 SGIP1Q9BQI5 828 aa14.85□□□□□ -0.03
MDH1-214ENST00000495083 PCDHB13Q9Y5F0 798 aa14.83□□□□□ -0.04
MDH1-214ENST00000495083 ZBTB47Q9UFB7 747 aaPredicted RBP14.81□□□□□ -0.04
MDH1-214ENST00000495083 FKBP8Q14318 412 aa14.78□□□□□ -0.04
MDH1-214ENST00000495083 IFNL1Q8IU54 200 aa14.78□□□□□ -0.04
MDH1-214ENST00000495083 FAM163AQ96GL9 167 aaPredicted RBP14.78□□□□□ -0.04
MDH1-214ENST00000495083 TRIM35Q9UPQ4 493 aa14.78□□□□□ -0.04
MDH1-214ENST00000495083 SEC24BO95487 1268 aa14.76□□□□□ -0.05
MDH1-214ENST00000495083 IER5LQ5T953 404 aa14.75□□□□□ -0.05
MDH1-214ENST00000495083 PCDH10Q9P2E7 1040 aa14.74□□□□□ -0.05
MDH1-214ENST00000495083 FAM212AQ96EL1 285 aa14.72□□□□□ -0.05
MDH1-214ENST00000495083 TMEM106CQ9BVX2 250 aa14.67□□□□□ -0.06
MDH1-214ENST00000495083 DCAF8Q5TAQ9 597 aa14.59□□□□□ -0.07
MDH1-214ENST00000495083 IRX5P78411 483 aaPredicted RBP14.58□□□□□ -0.08
MDH1-214ENST00000495083 PYGBP11216 843 aa14.57□□□□□ -0.08
MDH1-214ENST00000495083 PLCG2P16885 1265 aa14.54□□□□□ -0.08
MDH1-214ENST00000495083 SLAIN1Q8ND83 568 aa14.54□□□□□ -0.08
MDH1-214ENST00000495083 FBXO3Q9UK99 471 aa14.52□□□□□ -0.09
MDH1-214ENST00000495083 PCDHB8Q9UN66 801 aa14.52□□□□□ -0.09
MDH1-214ENST00000495083 OCEL1Q9H607 264 aa14.47□□□□□ -0.09
MDH1-214ENST00000495083 ST18O60284 1047 aa14.46□□□□□ -0.09
MDH1-214ENST00000495083 CDAN1Q8IWY9 1227 aa14.44□□□□□ -0.1
MDH1-214ENST00000495083 VASPP50552 380 aaPredicted RBP14.4□□□□□ -0.1
MDH1-214ENST00000495083 GSE1Q14687 1217 aa14.36□□□□□ -0.11
MDH1-214ENST00000495083 KLHL34Q8N239 644 aa14.36□□□□□ -0.11
MDH1-214ENST00000495083 PDCD7Q8N8D1 485 aaKnown RBP14.34□□□□□ -0.11
MDH1-214ENST00000495083 CHRM1P11229 460 aaPredicted RBP14.32□□□□□ -0.12
MDH1-214ENST00000495083 ZNF467Q7Z7K2 595 aaPredicted RBP14.32□□□□□ -0.12
MDH1-214ENST00000495083 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.32□□□□□ -0.12
MDH1-214ENST00000495083 TMEM121BQ9BXQ6 578 aaPredicted RBP14.26□□□□□ -0.13
MDH1-214ENST00000495083 SNPHO15079 494 aa14.24□□□□□ -0.13
MDH1-214ENST00000495083 PSEN1P49768 467 aa14.24□□□□□ -0.13
MDH1-214ENST00000495083 MKRN3Q13064 507 aaKnown RBP14.23□□□□□ -0.13
MDH1-214ENST00000495083 GOLGA2Q08379 1002 aa14.21□□□□□ -0.13
MDH1-214ENST00000495083 ILDR1Q86SU0 546 aaPredicted RBP14.19□□□□□ -0.14
MDH1-214ENST00000495083 MARVELD3Q96A59 401 aa14.19□□□□□ -0.14
MDH1-214ENST00000495083 L3MBTL3Q96JM7 780 aaPredicted RBP14.19□□□□□ -0.14
MDH1-214ENST00000495083 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.19□□□□□ -0.145e-20■■■□□ 15
MDH1-214ENST00000495083 C3orf67Q6ZVT6 689 aa14.16□□□□□ -0.14
MDH1-214ENST00000495083 IFNLR1Q8IU57 520 aaPredicted RBP14.16□□□□□ -0.14
MDH1-214ENST00000495083 PDAP1Q13442 181 aaKnown RBP14.14□□□□□ -0.15
MDH1-214ENST00000495083 DPY19L2Q6NUT2 758 aa14.12□□□□□ -0.15
MDH1-214ENST00000495083 SPOCK2Q92563 424 aa14.12□□□□□ -0.15
MDH1-214ENST00000495083 SPNS2Q8IVW8 549 aa14.11□□□□□ -0.15
MDH1-214ENST00000495083 MMRN1Q13201 1228 aa14.08□□□□□ -0.16
MDH1-214ENST00000495083 CIZ1Q9ULV3 898 aaPredicted RBP14.07□□□□□ -0.16
MDH1-214ENST00000495083 CABP2Q9NPB3 220 aa14.06□□□□□ -0.16
MDH1-214ENST00000495083 POTEB3A0JP26 581 aa14.04□□□□□ -0.16
MDH1-214ENST00000495083 POTEBQ6S5H4 581 aa14.04□□□□□ -0.16
MDH1-214ENST00000495083 EMP3P54852 163 aa14.03□□□□□ -0.16
MDH1-214ENST00000495083 BOLA1Q9Y3E2 137 aa13.99□□□□□ -0.17
MDH1-214ENST00000495083 HS3ST6Q96QI5 342 aa13.97□□□□□ -0.17
MDH1-214ENST00000495083 KRTAP3-3Q9BYR6 98 aa13.96□□□□□ -0.17
MDH1-214ENST00000495083 KRTAP3-2Q9BYR7 98 aa13.96□□□□□ -0.17
MDH1-214ENST00000495083 FAM205CA6NFA0 338 aa13.95□□□□□ -0.18
MDH1-214ENST00000495083 HOXB3P14651 431 aaPredicted RBP13.95□□□□□ -0.18
MDH1-214ENST00000495083 G3V3G9 751 aa13.89□□□□□ -0.19
MDH1-214ENST00000495083 EFCAB3Q8N7B9 438 aa13.89□□□□□ -0.19
MDH1-214ENST00000495083 TRIM41Q8WV44 630 aa13.85□□□□□ -0.19
MDH1-214ENST00000495083 HOXB1P14653 301 aaPredicted RBP13.84□□□□□ -0.19
MDH1-214ENST00000495083 ZNF710Q8N1W2 664 aa13.79□□□□□ -0.2
MDH1-214ENST00000495083 DOK7Q18PE1 504 aa13.78□□□□□ -0.2
MDH1-214ENST00000495083 TMEM92Q6UXU6 159 aa13.78□□□□□ -0.2
MDH1-214ENST00000495083 MICALL2Q8IY33 904 aa13.76□□□□□ -0.21
MDH1-214ENST00000495083 RNF25Q96BH1 459 aaPredicted RBP13.76□□□□□ -0.21
MDH1-214ENST00000495083 MS4A4AQ96JQ5 239 aa13.74□□□□□ -0.21
MDH1-214ENST00000495083 ERBB3P21860 1342 aa13.72□□□□□ -0.21
MDH1-214ENST00000495083 RIOK3O14730 519 aaKnown RBP13.72□□□□□ -0.21
MDH1-214ENST00000495083 SOX12O15370 315 aa13.72□□□□□ -0.21
MDH1-214ENST00000495083 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.7□□□□□ -0.22
MDH1-214ENST00000495083 ZFP91Q96JP5 570 aaPredicted RBP13.7□□□□□ -0.22
MDH1-214ENST00000495083 PHF8Q9UPP1 1060 aa13.67□□□□□ -0.22
MDH1-214ENST00000495083 RIMBP2O15034 1052 aa13.66□□□□□ -0.22
MDH1-214ENST00000495083 VGFO15240 615 aaPredicted RBP13.65□□□□□ -0.22
MDH1-214ENST00000495083 VARS2Q5ST30 1063 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms