RNA–Protein interactions for RNA: ENST00000494900.1

LINC01997-201, Transcript of long intergenic non-protein coding RNA 1997, humanhuman

TSL 2 BASIC

Gene LINC01997, Length 429 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01997-201ENST00000494900 PCDH10Q9P2E7 1040 aa14.01□□□□□ -0.17
LINC01997-201ENST00000494900 C7P10643 843 aa14□□□□□ -0.17
LINC01997-201ENST00000494900 MS4A3Q96HJ5 214 aa14□□□□□ -0.17
LINC01997-201ENST00000494900 ATMINO43313 823 aaPredicted RBP13.99□□□□□ -0.17
LINC01997-201ENST00000494900 MAMSTRQ6ZN01 415 aa13.96□□□□□ -0.17
LINC01997-201ENST00000494900 POTEJP0CG39 1038 aa13.94□□□□□ -0.18
LINC01997-201ENST00000494900 SCUBE2Q9NQ36 999 aa13.84□□□□□ -0.19
LINC01997-201ENST00000494900 ATN1P54259 1190 aaPredicted RBP13.82□□□□□ -0.2
LINC01997-201ENST00000494900 TSPYL2Q9H2G4 693 aaPredicted RBP13.82□□□□□ -0.2
LINC01997-201ENST00000494900 CCDC61Q9Y6R9 512 aa13.82□□□□□ -0.2
LINC01997-201ENST00000494900 LCE2DQ5TA82 110 aaPredicted RBP13.81□□□□□ -0.2
LINC01997-201ENST00000494900 KIF12Q96FN5 646 aa13.77□□□□□ -0.21
LINC01997-201ENST00000494900 FAM163AQ96GL9 167 aaPredicted RBP13.77□□□□□ -0.21
LINC01997-201ENST00000494900 PROM2Q8N271 834 aa13.73□□□□□ -0.21
LINC01997-201ENST00000494900 BMP2KQ9NSY1 1161 aaPredicted RBP13.73□□□□□ -0.21
LINC01997-201ENST00000494900 POTEFA5A3E0 1075 aa13.71□□□□□ -0.21
LINC01997-201ENST00000494900 TIE1P35590 1138 aa13.69□□□□□ -0.22
LINC01997-201ENST00000494900 TRPC6Q9Y210 931 aa13.66□□□□□ -0.22
LINC01997-201ENST00000494900 MAP3K13O43283 966 aa13.64□□□□□ -0.23
LINC01997-201ENST00000494900 EHMT2Q96KQ7 1210 aa13.63□□□□□ -0.23
LINC01997-201ENST00000494900 PLEKHG5O94827 1062 aa13.61□□□□□ -0.23
LINC01997-201ENST00000494900 SEC24BO95487 1268 aa13.58□□□□□ -0.24
LINC01997-201ENST00000494900 TTLL13PA6NNM8 815 aa13.57□□□□□ -0.24
LINC01997-201ENST00000494900 COLQQ9Y215 455 aaPredicted RBP13.57□□□□□ -0.24
LINC01997-201ENST00000494900 RASEFQ8IZ41 740 aa13.56□□□□□ -0.24
LINC01997-201ENST00000494900 IER5LQ5T953 404 aa13.54□□□□□ -0.24
LINC01997-201ENST00000494900 MIER1Q8N108 512 aa13.53□□□□□ -0.24
LINC01997-201ENST00000494900 CDAN1Q8IWY9 1227 aa13.52□□□□□ -0.25
LINC01997-201ENST00000494900 SGIP1Q9BQI5 828 aa13.52□□□□□ -0.25
LINC01997-201ENST00000494900 TRIM35Q9UPQ4 493 aa13.49□□□□□ -0.25
LINC01997-201ENST00000494900 PCDHB13Q9Y5F0 798 aa13.44□□□□□ -0.26
LINC01997-201ENST00000494900 SLAIN1Q8ND83 568 aa13.41□□□□□ -0.26
LINC01997-201ENST00000494900 ST18O60284 1047 aa13.39□□□□□ -0.27
LINC01997-201ENST00000494900 PLCD3Q8N3E9 789 aa13.36□□□□□ -0.27
LINC01997-201ENST00000494900 ZBTB47Q9UFB7 747 aaPredicted RBP13.35□□□□□ -0.27
LINC01997-201ENST00000494900 IFNL1Q8IU54 200 aa13.34□□□□□ -0.27
LINC01997-201ENST00000494900 PLCG2P16885 1265 aa13.33□□□□□ -0.28
LINC01997-201ENST00000494900 NUBP1P53384 320 aa13.33□□□□□ -0.28
LINC01997-201ENST00000494900 TMEM106CQ9BVX2 250 aa13.32□□□□□ -0.28
LINC01997-201ENST00000494900 IRX5P78411 483 aaPredicted RBP13.28□□□□□ -0.28
LINC01997-201ENST00000494900 FAM212AQ96EL1 285 aa13.27□□□□□ -0.29
LINC01997-201ENST00000494900 TMEM121BQ9BXQ6 578 aaPredicted RBP13.26□□□□□ -0.29
LINC01997-201ENST00000494900 MMRN1Q13201 1228 aa13.22□□□□□ -0.29
LINC01997-201ENST00000494900 SNPHO15079 494 aa13.21□□□□□ -0.29
LINC01997-201ENST00000494900 SPNS2Q8IVW8 549 aa13.2□□□□□ -0.3
LINC01997-201ENST00000494900 OCEL1Q9H607 264 aa13.2□□□□□ -0.3
LINC01997-201ENST00000494900 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.16□□□□□ -0.3
LINC01997-201ENST00000494900 MARVELD3Q96A59 401 aa13.08□□□□□ -0.32
LINC01997-201ENST00000494900 PYGBP11216 843 aa13.06□□□□□ -0.32
LINC01997-201ENST00000494900 DCAF8Q5TAQ9 597 aa13.05□□□□□ -0.32
LINC01997-201ENST00000494900 PCDHB8Q9UN66 801 aa13.02□□□□□ -0.33
LINC01997-201ENST00000494900 C3orf67Q6ZVT6 689 aa12.99□□□□□ -0.33
LINC01997-201ENST00000494900 PDCD7Q8N8D1 485 aaKnown RBP12.99□□□□□ -0.33
LINC01997-201ENST00000494900 EMP3P54852 163 aa12.98□□□□□ -0.33
LINC01997-201ENST00000494900 L3MBTL3Q96JM7 780 aaPredicted RBP12.97□□□□□ -0.33
LINC01997-201ENST00000494900 GOLGA2Q08379 1002 aa12.92□□□□□ -0.34
LINC01997-201ENST00000494900 MKRN3Q13064 507 aaKnown RBP12.92□□□□□ -0.34
LINC01997-201ENST00000494900 ZNF467Q7Z7K2 595 aaPredicted RBP12.91□□□□□ -0.34
LINC01997-201ENST00000494900 HS3ST6Q96QI5 342 aa12.91□□□□□ -0.34
LINC01997-201ENST00000494900 KRTAP3-3Q9BYR6 98 aa12.91□□□□□ -0.34
LINC01997-201ENST00000494900 KRTAP3-2Q9BYR7 98 aa12.91□□□□□ -0.34
LINC01997-201ENST00000494900 POTEB3A0JP26 581 aa12.88□□□□□ -0.35
LINC01997-201ENST00000494900 POTEBQ6S5H4 581 aa12.88□□□□□ -0.35
LINC01997-201ENST00000494900 FAM205CA6NFA0 338 aa12.87□□□□□ -0.35
LINC01997-201ENST00000494900 FKBP8Q14318 412 aa12.86□□□□□ -0.35
LINC01997-201ENST00000494900 GSE1Q14687 1217 aa12.85□□□□□ -0.35
LINC01997-201ENST00000494900 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC01997-201ENST00000494900 FBXO3Q9UK99 471 aa12.82□□□□□ -0.36
LINC01997-201ENST00000494900 CHRM1P11229 460 aaPredicted RBP12.81□□□□□ -0.36
LINC01997-201ENST00000494900 ILDR1Q86SU0 546 aaPredicted RBP12.8□□□□□ -0.36
LINC01997-201ENST00000494900 PSEN1P49768 467 aa12.78□□□□□ -0.36
LINC01997-201ENST00000494900 HOXB3P14651 431 aaPredicted RBP12.72□□□□□ -0.37
LINC01997-201ENST00000494900 KLHL34Q8N239 644 aa12.72□□□□□ -0.37
LINC01997-201ENST00000494900 G3V3G9 751 aa12.69□□□□□ -0.38
LINC01997-201ENST00000494900 HOXB1P14653 301 aaPredicted RBP12.69□□□□□ -0.38
LINC01997-201ENST00000494900 PDAP1Q13442 181 aaKnown RBP12.69□□□□□ -0.38
LINC01997-201ENST00000494900 DPY19L2Q6NUT2 758 aa12.69□□□□□ -0.38
LINC01997-201ENST00000494900 BOLA1Q9Y3E2 137 aa12.69□□□□□ -0.38
LINC01997-201ENST00000494900 ZNF710Q8N1W2 664 aa12.66□□□□□ -0.38
LINC01997-201ENST00000494900 VASPP50552 380 aaPredicted RBP12.65□□□□□ -0.38
LINC01997-201ENST00000494900 DOK7Q18PE1 504 aa12.64□□□□□ -0.39
LINC01997-201ENST00000494900 ERBB3P21860 1342 aa12.63□□□□□ -0.39
LINC01997-201ENST00000494900 CABP2Q9NPB3 220 aa12.62□□□□□ -0.39
LINC01997-201ENST00000494900 RNF166Q96A37 237 aaPredicted RBP12.61□□□□□ -0.39
LINC01997-201ENST00000494900 RIMBP2O15034 1052 aa12.56□□□□□ -0.4
LINC01997-201ENST00000494900 MYT1LQ9UL68 1186 aa12.53□□□□□ -0.4
LINC01997-201ENST00000494900 VARS2Q5ST30 1063 aaKnown RBP12.52□□□□□ -0.41
LINC01997-201ENST00000494900 ZSWIM6Q9HCJ5 1215 aa12.5□□□□□ -0.41
LINC01997-201ENST00000494900 ZNF687Q8N1G0 1237 aa12.48□□□□□ -0.41
LINC01997-201ENST00000494900 PTGER2P43116 358 aa12.46□□□□□ -0.41
LINC01997-201ENST00000494900 SPOCK2Q92563 424 aa12.46□□□□□ -0.41
LINC01997-201ENST00000494900 CIZ1Q9ULV3 898 aaPredicted RBP12.46□□□□□ -0.41
LINC01997-201ENST00000494900 EFCAB3Q8N7B9 438 aa12.41□□□□□ -0.42
LINC01997-201ENST00000494900 GPR153Q6NV75 609 aa12.4□□□□□ -0.42
LINC01997-201ENST00000494900 MICALL2Q8IY33 904 aa12.4□□□□□ -0.42
LINC01997-201ENST00000494900 TMEM92Q6UXU6 159 aa12.39□□□□□ -0.43
LINC01997-201ENST00000494900 IFNLR1Q8IU57 520 aaPredicted RBP12.36□□□□□ -0.43
LINC01997-201ENST00000494900 TRIM41Q8WV44 630 aa12.33□□□□□ -0.44
LINC01997-201ENST00000494900 SOX12O15370 315 aa12.3□□□□□ -0.44
LINC01997-201ENST00000494900 ANKRD13DQ6ZTN6 518 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms