RNA–Protein interactions for RNA: ENST00000494502.6

PDCD10-217, Transcript of programmed cell death 10, humanhuman

TSL 5

Gene PDCD10, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-217ENST00000494502 ECM2O94769 699 aaPredicted RBP18.39■□□□□ 0.53
PDCD10-217ENST00000494502 FXR2P51116 673 aaKnown RBP eCLIP18.37■□□□□ 0.53
PDCD10-217ENST00000494502 CIZ1Q9ULV3 898 aaPredicted RBP18.37■□□□□ 0.53
PDCD10-217ENST00000494502 CHADLQ6NUI6 762 aa18.36■□□□□ 0.53
PDCD10-217ENST00000494502 CHRDL2Q6WN34 429 aa18.36■□□□□ 0.53
PDCD10-217ENST00000494502 GSE1Q14687 1217 aa18.31■□□□□ 0.52
PDCD10-217ENST00000494502 NPM1P06748 294 aaKnown RBP eCLIP18.3■□□□□ 0.52
PDCD10-217ENST00000494502 DNAJC5Q9H3Z4 198 aa18.3■□□□□ 0.52
PDCD10-217ENST00000494502 PRKAR2AP13861 404 aaKnown RBP18.28■□□□□ 0.52
PDCD10-217ENST00000494502 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
PDCD10-217ENST00000494502 RASEFQ8IZ41 740 aa18.27■□□□□ 0.52
PDCD10-217ENST00000494502 FARP1Q9Y4F1 1045 aaPredicted RBP18.26■□□□□ 0.51
PDCD10-217ENST00000494502 FAM212AQ96EL1 285 aa18.25■□□□□ 0.51
PDCD10-217ENST00000494502 PIP4P2Q8N4L2 257 aa18.24■□□□□ 0.51
PDCD10-217ENST00000494502 RGL2O15211 777 aa18.23■□□□□ 0.51
PDCD10-217ENST00000494502 DCAF8Q5TAQ9 597 aa18.22■□□□□ 0.51
PDCD10-217ENST00000494502 CHRM1P11229 460 aaPredicted RBP18.07■□□□□ 0.48
PDCD10-217ENST00000494502 RNF25Q96BH1 459 aaPredicted RBP18.07■□□□□ 0.48
PDCD10-217ENST00000494502 CUX2O14529 1486 aa18.06■□□□□ 0.48
PDCD10-217ENST00000494502 SLC24A1O60721 1099 aa18.05■□□□□ 0.48
PDCD10-217ENST00000494502 TSPYL2Q9H2G4 693 aaPredicted RBP18■□□□□ 0.47
PDCD10-217ENST00000494502 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
PDCD10-217ENST00000494502 ERCC6Q03468 1493 aa17.97■□□□□ 0.47
PDCD10-217ENST00000494502 RIOK3O14730 519 aaKnown RBP17.96■□□□□ 0.47
PDCD10-217ENST00000494502 PYGBP11216 843 aa17.96■□□□□ 0.47
PDCD10-217ENST00000494502 CCDC61Q9Y6R9 512 aa17.92■□□□□ 0.46
PDCD10-217ENST00000494502 PLCB2Q00722 1185 aa17.91■□□□□ 0.46
PDCD10-217ENST00000494502 BBXQ8WY36 941 aaPredicted RBP17.9■□□□□ 0.46
PDCD10-217ENST00000494502 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
PDCD10-217ENST00000494502 CHGAP10645 457 aaKnown RBP17.87■□□□□ 0.45
PDCD10-217ENST00000494502 HMGXB3Q12766 1538 aa17.87■□□□□ 0.45
PDCD10-217ENST00000494502 HS6ST3Q8IZP7 471 aa17.86■□□□□ 0.45
PDCD10-217ENST00000494502 PAK3O75914 559 aaPredicted RBP17.85■□□□□ 0.45
PDCD10-217ENST00000494502 SMARCA4P51532 1647 aa17.85■□□□□ 0.45
PDCD10-217ENST00000494502 TAOK2Q9UL54 1235 aa17.85■□□□□ 0.45
PDCD10-217ENST00000494502 SMARCA2P51531 1590 aa17.83■□□□□ 0.45
PDCD10-217ENST00000494502 VGFO15240 615 aaPredicted RBP17.83■□□□□ 0.44
PDCD10-217ENST00000494502 NESP48681 1621 aa17.81■□□□□ 0.44
PDCD10-217ENST00000494502 SGIP1Q9BQI5 828 aa17.8■□□□□ 0.44
PDCD10-217ENST00000494502 CD44P16070 742 aaKnown RBP17.79■□□□□ 0.44
PDCD10-217ENST00000494502 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.77■□□□□ 0.44
PDCD10-217ENST00000494502 ZNF467Q7Z7K2 595 aaPredicted RBP17.75■□□□□ 0.43
PDCD10-217ENST00000494502 THOC2Q8NI27 1593 aaKnown RBP17.74■□□□□ 0.43
PDCD10-217ENST00000494502 C19orf67A6NJJ6 358 aa17.73■□□□□ 0.43
PDCD10-217ENST00000494502 ZRANB1Q9UGI0 708 aa17.73■□□□□ 0.43
PDCD10-217ENST00000494502 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.43
PDCD10-217ENST00000494502 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.71■□□□□ 0.43
PDCD10-217ENST00000494502 KIF12Q96FN5 646 aa17.71■□□□□ 0.43
PDCD10-217ENST00000494502 ZFP91Q96JP5 570 aaPredicted RBP17.71■□□□□ 0.43
PDCD10-217ENST00000494502 STK25O00506 426 aa17.7■□□□□ 0.42
PDCD10-217ENST00000494502 ZNF579Q8NAF0 562 aaKnown RBP17.7■□□□□ 0.42
PDCD10-217ENST00000494502 BAZ1AQ9NRL2 1556 aaPredicted RBP17.69■□□□□ 0.42
PDCD10-217ENST00000494502 PEG3Q9GZU2 1588 aa17.68■□□□□ 0.42
PDCD10-217ENST00000494502 PCDHB8Q9UN66 801 aa17.68■□□□□ 0.42
PDCD10-217ENST00000494502 PCDHB13Q9Y5F0 798 aa17.68■□□□□ 0.42
PDCD10-217ENST00000494502 MAP3K13O43283 966 aa17.66■□□□□ 0.42
PDCD10-217ENST00000494502 LAMC3Q9Y6N6 1575 aa17.66■□□□□ 0.42
PDCD10-217ENST00000494502 PAXIP1Q6ZW49 1069 aaPredicted RBP17.65■□□□□ 0.42
PDCD10-217ENST00000494502 BCL11BQ9C0K0 894 aaPredicted RBP17.64■□□□□ 0.41
PDCD10-217ENST00000494502 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.41
PDCD10-217ENST00000494502 PDAP1Q13442 181 aaKnown RBP17.63■□□□□ 0.41
PDCD10-217ENST00000494502 PHF12Q96QT6 1004 aa17.63■□□□□ 0.41
PDCD10-217ENST00000494502 IFNL1Q8IU54 200 aa17.62■□□□□ 0.41
PDCD10-217ENST00000494502 NKX1-1Q15270 411 aaPredicted RBP17.61■□□□□ 0.41
PDCD10-217ENST00000494502 SPRYD3Q8NCJ5 442 aa17.6■□□□□ 0.41
PDCD10-217ENST00000494502 STK24Q9Y6E0 443 aa17.6■□□□□ 0.41
PDCD10-217ENST00000494502 CFAP44Q96MT7 982 aa17.59■□□□□ 0.41
PDCD10-217ENST00000494502 HAP1P54257 671 aaPredicted RBP17.57■□□□□ 0.4
PDCD10-217ENST00000494502 PSEN1P49768 467 aa17.55■□□□□ 0.4
PDCD10-217ENST00000494502 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
PDCD10-217ENST00000494502 PDS5BQ9NTI5 1447 aa17.5■□□□□ 0.39
PDCD10-217ENST00000494502 HAX1O00165 279 aa17.46■□□□□ 0.39
PDCD10-217ENST00000494502 GTPBP6O43824 516 aaPredicted RBP17.46■□□□□ 0.39
PDCD10-217ENST00000494502 MS4A3Q96HJ5 214 aa17.44■□□□□ 0.38
PDCD10-217ENST00000494502 EVX2Q03828 476 aa17.42■□□□□ 0.38
PDCD10-217ENST00000494502 MRC2Q9UBG0 1479 aa17.42■□□□□ 0.38
PDCD10-217ENST00000494502 WDR62O43379 1518 aa17.41■□□□□ 0.38
PDCD10-217ENST00000494502 CADPSQ9ULU8 1353 aa17.39■□□□□ 0.37
PDCD10-217ENST00000494502 VSIG10Q8N0Z9 540 aa17.36■□□□□ 0.37
PDCD10-217ENST00000494502 TSHZ2Q9NRE2 1034 aa17.36■□□□□ 0.37
PDCD10-217ENST00000494502 RYDENQ9NUL5 291 aaKnown RBP17.36■□□□□ 0.37
PDCD10-217ENST00000494502 TRPC6Q9Y210 931 aa17.36■□□□□ 0.37
PDCD10-217ENST00000494502 WIZO95785 1651 aa17.33■□□□□ 0.37
PDCD10-217ENST00000494502 POTEHQ6S545 545 aa17.32■□□□□ 0.36
PDCD10-217ENST00000494502 CABP2Q9NPB3 220 aa17.32■□□□□ 0.36
PDCD10-217ENST00000494502 CLCN6P51797 869 aa17.31■□□□□ 0.36
PDCD10-217ENST00000494502 EFCAB3Q8N7B9 438 aa17.29■□□□□ 0.36
PDCD10-217ENST00000494502 TMEM106CQ9BVX2 250 aa17.29■□□□□ 0.36
PDCD10-217ENST00000494502 MFRPQ9BY79 579 aa17.29■□□□□ 0.36
PDCD10-217ENST00000494502 CEP164Q9UPV0 1460 aa17.29■□□□□ 0.36
PDCD10-217ENST00000494502 GALR2O43603 387 aaPredicted RBP17.28■□□□□ 0.36
PDCD10-217ENST00000494502 KDM2AQ9Y2K7 1162 aa17.27■□□□□ 0.36
PDCD10-217ENST00000494502 TIE1P35590 1138 aa17.26■□□□□ 0.35
PDCD10-217ENST00000494502 FANCD2Q9BXW9 1451 aa17.24■□□□□ 0.35
PDCD10-217ENST00000494502 SOX12O15370 315 aa17.23■□□□□ 0.35
PDCD10-217ENST00000494502 TTLL13PA6NNM8 815 aa17.21■□□□□ 0.35
PDCD10-217ENST00000494502 FBXO22Q8NEZ5 403 aa17.21■□□□□ 0.35
PDCD10-217ENST00000494502 BMP2KQ9NSY1 1161 aaPredicted RBP17.21■□□□□ 0.35
PDCD10-217ENST00000494502 NLRP6P59044 892 aa17.17■□□□□ 0.34
PDCD10-217ENST00000494502 PHF8Q9UPP1 1060 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms