RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 TRIM26Q12899 539 aaPredicted RBP11.74□□□□□ -0.53
SNX13-210ENST00000494402 CHGAP10645 457 aaKnown RBP11.72□□□□□ -0.53
SNX13-210ENST00000494402 UBTFP17480 764 aaKnown RBP11.71□□□□□ -0.53
SNX13-210ENST00000494402 BRPF1P55201 1214 aaPredicted RBP11.6□□□□□ -0.55
SNX13-210ENST00000494402 HRCP23327 699 aa11.58□□□□□ -0.56
SNX13-210ENST00000494402 OSCARQ8IYS5 282 aa11.57□□□□□ -0.56
SNX13-210ENST00000494402 SPDYE2BA6NHP3 402 aa11.55□□□□□ -0.56
SNX13-210ENST00000494402 SPDYE6P0CI01 402 aa11.55□□□□□ -0.56
SNX13-210ENST00000494402 SPDYE2Q495Y8 402 aa11.55□□□□□ -0.56
SNX13-210ENST00000494402 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
SNX13-210ENST00000494402 HS6ST3Q8IZP7 471 aa11.53□□□□□ -0.56
SNX13-210ENST00000494402 PELP1Q8IZL8 1130 aaKnown RBP11.52□□□□□ -0.57
SNX13-210ENST00000494402 LMOD2Q6P5Q4 547 aa11.47□□□□□ -0.57
SNX13-210ENST00000494402 SSUH2Q9Y2M2 353 aa11.47□□□□□ -0.57
SNX13-210ENST00000494402 NEUROD2Q15784 382 aa11.46□□□□□ -0.57
SNX13-210ENST00000494402 P3H3Q8IVL6 736 aa11.46□□□□□ -0.57
SNX13-210ENST00000494402 CCDC9Q9Y3X0 531 aaKnown RBP11.43□□□□□ -0.58
SNX13-210ENST00000494402 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.42□□□□□ -0.58
SNX13-210ENST00000494402 RSPH6AQ9H0K4 717 aa11.42□□□□□ -0.58
SNX13-210ENST00000494402 ZMYND15Q9H091 742 aa11.41□□□□□ -0.58
SNX13-210ENST00000494402 PABPN1Q86U42 306 aaKnown RBP eCLIP11.4□□□□□ -0.58
SNX13-210ENST00000494402 TTBK1Q5TCY1 1321 aaPredicted RBP11.39□□□□□ -0.59
SNX13-210ENST00000494402 MYT1Q01538 1121 aa11.39□□□□□ -0.59
SNX13-210ENST00000494402 PIP4P2Q8N4L2 257 aa11.38□□□□□ -0.59
SNX13-210ENST00000494402 CIZ1Q9ULV3 898 aaPredicted RBP11.38□□□□□ -0.59
SNX13-210ENST00000494402 HAX1O00165 279 aa11.37□□□□□ -0.59
SNX13-210ENST00000494402 TRIM41Q8WV44 630 aa11.37□□□□□ -0.59
SNX13-210ENST00000494402 ZBTB7CA1YPR0 619 aa11.36□□□□□ -0.59
SNX13-210ENST00000494402 PLCD3Q8N3E9 789 aa11.36□□□□□ -0.59
SNX13-210ENST00000494402 GTPBP6O43824 516 aaPredicted RBP11.34□□□□□ -0.59
SNX13-210ENST00000494402 STAG3Q9UJ98 1225 aa11.34□□□□□ -0.59
SNX13-210ENST00000494402 AKT1S1Q96B36 256 aa11.33□□□□□ -0.6
SNX13-210ENST00000494402 NKX1-1Q15270 411 aaPredicted RBP11.31□□□□□ -0.6
SNX13-210ENST00000494402 ARID3AQ99856 593 aa11.3□□□□□ -0.6
SNX13-210ENST00000494402 PDIA4P13667 645 aaKnown RBP11.25□□□□□ -0.61
SNX13-210ENST00000494402 ZC3H15Q8WU90 426 aaKnown RBP11.24□□□□□ -0.61
SNX13-210ENST00000494402 SLC24A3Q9HC58 644 aa11.23□□□□□ -0.61
SNX13-210ENST00000494402 REM2Q8IYK8 340 aaPredicted RBP11.22□□□□□ -0.61
SNX13-210ENST00000494402 EVX2Q03828 476 aa11.2□□□□□ -0.62
SNX13-210ENST00000494402 MIER1Q8N108 512 aa11.2□□□□□ -0.62
SNX13-210ENST00000494402 KCNV2Q8TDN2 545 aa11.19□□□□□ -0.62
SNX13-210ENST00000494402 RYDENQ9NUL5 291 aaKnown RBP11.19□□□□□ -0.62
SNX13-210ENST00000494402 FXR2P51116 673 aaKnown RBP eCLIP11.18□□□□□ -0.62
SNX13-210ENST00000494402 ZBTB47Q9UFB7 747 aaPredicted RBP11.17□□□□□ -0.62
SNX13-210ENST00000494402 RNF25Q96BH1 459 aaPredicted RBP11.16□□□□□ -0.62
SNX13-210ENST00000494402 WDR70Q9NW82 654 aa11.16□□□□□ -0.62
SNX13-210ENST00000494402 C1orf115Q9H7X2 142 aa11.15□□□□□ -0.62
SNX13-210ENST00000494402 SPDYE1Q8NFV5 336 aaPredicted RBP11.14□□□□□ -0.63
SNX13-210ENST00000494402 PITPNM1O00562 1244 aa11.13□□□□□ -0.63
SNX13-210ENST00000494402 PLEKHG5O94827 1062 aa11.12□□□□□ -0.63
SNX13-210ENST00000494402 RIOK3O14730 519 aaKnown RBP11.09□□□□□ -0.63
SNX13-210ENST00000494402 STK25O00506 426 aa11.08□□□□□ -0.64
SNX13-210ENST00000494402 NECTIN2Q92692 538 aa11.08□□□□□ -0.64
SNX13-210ENST00000494402 LOC105371045A0A1W2PR82 267 aa11.07□□□□□ -0.64
SNX13-210ENST00000494402 LHX8Q68G74 356 aa11.07□□□□□ -0.64
SNX13-210ENST00000494402 CLEC11AQ9Y240 323 aa11.07□□□□□ -0.64
SNX13-210ENST00000494402 APBB1O00213 710 aa11.06□□□□□ -0.64
SNX13-210ENST00000494402 SHROOM4Q9ULL8 1493 aa11.05□□□□□ -0.64
SNX13-210ENST00000494402 GSE1Q14687 1217 aa11.04□□□□□ -0.64
SNX13-210ENST00000494402 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
SNX13-210ENST00000494402 ARID3CA6NKF2 412 aa11.02□□□□□ -0.65
SNX13-210ENST00000494402 ZMYND10O75800 440 aa11.02□□□□□ -0.65
SNX13-210ENST00000494402 PRR29P0C7W0 189 aa11.02□□□□□ -0.65
SNX13-210ENST00000494402 VGFO15240 615 aaPredicted RBP11□□□□□ -0.65
SNX13-210ENST00000494402 KCTD17Q8N5Z5 321 aa10.99□□□□□ -0.65
SNX13-210ENST00000494402 IL27Q8NEV9 243 aa10.98□□□□□ -0.65
SNX13-210ENST00000494402 ARHGEF1Q92888 912 aaKnown RBP10.98□□□□□ -0.65
SNX13-210ENST00000494402 HMGB1P09429 215 aaKnown RBP10.96□□□□□ -0.65
SNX13-210ENST00000494402 TESPA1A2RU30 521 aaPredicted RBP10.95□□□□□ -0.66
SNX13-210ENST00000494402 RAD21O60216 631 aa10.93□□□□□ -0.66
SNX13-210ENST00000494402 GPBP1L1Q9HC44 474 aaPredicted RBP10.93□□□□□ -0.66
SNX13-210ENST00000494402 BARGINQ6ZT62 677 aa10.92□□□□□ -0.66
SNX13-210ENST00000494402 AK7Q96M32 723 aa10.92□□□□□ -0.66
SNX13-210ENST00000494402 CREBZFQ9NS37 354 aa10.92□□□□□ -0.66
SNX13-210ENST00000494402 STK24Q9Y6E0 443 aa10.92□□□□□ -0.66
SNX13-210ENST00000494402 MKRN3Q13064 507 aaKnown RBP10.91□□□□□ -0.66
SNX13-210ENST00000494402 EIF5BO60841 1220 aaKnown RBP10.9□□□□□ -0.66
SNX13-210ENST00000494402 FLIIQ13045 1269 aa10.9□□□□□ -0.66
SNX13-210ENST00000494402 CADPS2Q86UW7 1296 aa10.9□□□□□ -0.66
SNX13-210ENST00000494402 SGIP1Q9BQI5 828 aa10.9□□□□□ -0.66
SNX13-210ENST00000494402 IGSF3O75054 1194 aa10.89□□□□□ -0.67
SNX13-210ENST00000494402 GABBR2O75899 941 aa10.89□□□□□ -0.67
SNX13-210ENST00000494402 TRAIPQ9BWF2 469 aa10.89□□□□□ -0.67
SNX13-210ENST00000494402 BCL11BQ9C0K0 894 aaPredicted RBP10.89□□□□□ -0.67
SNX13-210ENST00000494402 KDM4CQ9H3R0 1056 aa10.89□□□□□ -0.67
SNX13-210ENST00000494402 SEMA3EO15041 775 aa10.88□□□□□ -0.67
SNX13-210ENST00000494402 SMYD5Q6GMV2 418 aa10.88□□□□□ -0.67
SNX13-210ENST00000494402 CCDC82Q8N4S0 544 aa10.88□□□□□ -0.67
SNX13-210ENST00000494402 C19orf67A6NJJ6 358 aa10.86□□□□□ -0.67
SNX13-210ENST00000494402 RGS22Q8NE09 1264 aa10.86□□□□□ -0.67
SNX13-210ENST00000494402 CDK11BP21127 795 aaKnown RBP10.83□□□□□ -0.68
SNX13-210ENST00000494402 MNX1P50219 401 aaPredicted RBP10.83□□□□□ -0.68
SNX13-210ENST00000494402 NUBP1P53384 320 aa10.83□□□□□ -0.68
SNX13-210ENST00000494402 CDK11AQ9UQ88 783 aaPredicted RBP10.83□□□□□ -0.68
SNX13-210ENST00000494402 HSP90B1P14625 803 aaKnown RBP10.82□□□□□ -0.68
SNX13-210ENST00000494402 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.81□□□□□ -0.68
SNX13-210ENST00000494402 PRKAR2AP13861 404 aaKnown RBP10.81□□□□□ -0.68
SNX13-210ENST00000494402 DCAF8Q5TAQ9 597 aa10.81□□□□□ -0.68
SNX13-210ENST00000494402 ZFP91Q96JP5 570 aaPredicted RBP10.81□□□□□ -0.68
SNX13-210ENST00000494402 E2F4Q16254 413 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms