RNA–Protein interactions for RNA: ENST00000494276.1

ZNF561-219, Transcript of zinc finger protein 561, humanhuman

TSL 3

Gene ZNF561, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-219ENST00000494276 MAMSTRQ6ZN01 415 aa12.56□□□□□ -0.4
ZNF561-219ENST00000494276 SLC39A7Q92504 469 aa12.55□□□□□ -0.4
ZNF561-219ENST00000494276 CSRNP3Q8WYN3 585 aa12.54□□□□□ -0.4
ZNF561-219ENST00000494276 ASTLQ6HA08 431 aaPredicted RBP12.53□□□□□ -0.4
ZNF561-219ENST00000494276 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
ZNF561-219ENST00000494276 MS4A3Q96HJ5 214 aa12.5□□□□□ -0.41
ZNF561-219ENST00000494276 ATMINO43313 823 aaPredicted RBP12.49□□□□□ -0.41
ZNF561-219ENST00000494276 SCUBE2Q9NQ36 999 aa12.45□□□□□ -0.42
ZNF561-219ENST00000494276 FAM163AQ96GL9 167 aaPredicted RBP12.41□□□□□ -0.42
ZNF561-219ENST00000494276 TSPYL2Q9H2G4 693 aaPredicted RBP12.4□□□□□ -0.42
ZNF561-219ENST00000494276 ATN1P54259 1190 aaPredicted RBP12.35□□□□□ -0.43
ZNF561-219ENST00000494276 POTEFA5A3E0 1075 aa12.33□□□□□ -0.44
ZNF561-219ENST00000494276 CCDC61Q9Y6R9 512 aa12.31□□□□□ -0.44
ZNF561-219ENST00000494276 KIF12Q96FN5 646 aa12.29□□□□□ -0.44
ZNF561-219ENST00000494276 PLEKHG5O94827 1062 aa12.26□□□□□ -0.45
ZNF561-219ENST00000494276 BMP2KQ9NSY1 1161 aaPredicted RBP12.26□□□□□ -0.45
ZNF561-219ENST00000494276 SEC24BO95487 1268 aa12.23□□□□□ -0.45
ZNF561-219ENST00000494276 TIE1P35590 1138 aa12.23□□□□□ -0.45
ZNF561-219ENST00000494276 MAP3K13O43283 966 aa12.19□□□□□ -0.46
ZNF561-219ENST00000494276 CDAN1Q8IWY9 1227 aa12.17□□□□□ -0.46
ZNF561-219ENST00000494276 EHMT2Q96KQ7 1210 aa12.17□□□□□ -0.46
ZNF561-219ENST00000494276 TRPC6Q9Y210 931 aa12.17□□□□□ -0.46
ZNF561-219ENST00000494276 PROM2Q8N271 834 aa12.16□□□□□ -0.46
ZNF561-219ENST00000494276 MIER1Q8N108 512 aa12.15□□□□□ -0.46
ZNF561-219ENST00000494276 TTLL13PA6NNM8 815 aa12.13□□□□□ -0.47
ZNF561-219ENST00000494276 COLQQ9Y215 455 aaPredicted RBP12.12□□□□□ -0.47
ZNF561-219ENST00000494276 IER5LQ5T953 404 aa12.1□□□□□ -0.47
ZNF561-219ENST00000494276 RASEFQ8IZ41 740 aa12.1□□□□□ -0.47
ZNF561-219ENST00000494276 SGIP1Q9BQI5 828 aa12.07□□□□□ -0.48
ZNF561-219ENST00000494276 TRIM35Q9UPQ4 493 aa12.07□□□□□ -0.48
ZNF561-219ENST00000494276 PCDHB13Q9Y5F0 798 aa12.05□□□□□ -0.48
ZNF561-219ENST00000494276 SLAIN1Q8ND83 568 aa12.04□□□□□ -0.48
ZNF561-219ENST00000494276 ST18O60284 1047 aa12□□□□□ -0.49
ZNF561-219ENST00000494276 PLCD3Q8N3E9 789 aa12□□□□□ -0.49
ZNF561-219ENST00000494276 ZBTB47Q9UFB7 747 aaPredicted RBP11.98□□□□□ -0.49
ZNF561-219ENST00000494276 PLCG2P16885 1265 aa11.97□□□□□ -0.49
ZNF561-219ENST00000494276 MMRN1Q13201 1228 aa11.97□□□□□ -0.49
ZNF561-219ENST00000494276 TMEM106CQ9BVX2 250 aa11.94□□□□□ -0.5
ZNF561-219ENST00000494276 SPNS2Q8IVW8 549 aa11.93□□□□□ -0.5
ZNF561-219ENST00000494276 IFNL1Q8IU54 200 aa11.92□□□□□ -0.5
ZNF561-219ENST00000494276 SNPHO15079 494 aa11.89□□□□□ -0.51
ZNF561-219ENST00000494276 FAM212AQ96EL1 285 aa11.89□□□□□ -0.51
ZNF561-219ENST00000494276 TMEM121BQ9BXQ6 578 aaPredicted RBP11.88□□□□□ -0.51
ZNF561-219ENST00000494276 NUBP1P53384 320 aa11.86□□□□□ -0.51
ZNF561-219ENST00000494276 IRX5P78411 483 aaPredicted RBP11.84□□□□□ -0.51
ZNF561-219ENST00000494276 OCEL1Q9H607 264 aa11.83□□□□□ -0.52
ZNF561-219ENST00000494276 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.83□□□□□ -0.52
ZNF561-219ENST00000494276 MARVELD3Q96A59 401 aa11.75□□□□□ -0.53
ZNF561-219ENST00000494276 DCAF8Q5TAQ9 597 aa11.72□□□□□ -0.53
ZNF561-219ENST00000494276 PYGBP11216 843 aa11.68□□□□□ -0.54
ZNF561-219ENST00000494276 C3orf67Q6ZVT6 689 aa11.68□□□□□ -0.54
ZNF561-219ENST00000494276 EMP3P54852 163 aa11.67□□□□□ -0.54
ZNF561-219ENST00000494276 L3MBTL3Q96JM7 780 aaPredicted RBP11.65□□□□□ -0.54
ZNF561-219ENST00000494276 PCDHB8Q9UN66 801 aa11.65□□□□□ -0.54
ZNF561-219ENST00000494276 GOLGA2Q08379 1002 aa11.64□□□□□ -0.55
ZNF561-219ENST00000494276 KRTAP3-3Q9BYR6 98 aa11.64□□□□□ -0.55
ZNF561-219ENST00000494276 KRTAP3-2Q9BYR7 98 aa11.64□□□□□ -0.55
ZNF561-219ENST00000494276 POTEB3A0JP26 581 aa11.63□□□□□ -0.55
ZNF561-219ENST00000494276 POTEBQ6S5H4 581 aa11.63□□□□□ -0.55
ZNF561-219ENST00000494276 MKRN3Q13064 507 aaKnown RBP11.61□□□□□ -0.55
ZNF561-219ENST00000494276 PDCD7Q8N8D1 485 aaKnown RBP11.57□□□□□ -0.56
ZNF561-219ENST00000494276 FAM205CA6NFA0 338 aa11.56□□□□□ -0.56
ZNF561-219ENST00000494276 ZNF467Q7Z7K2 595 aaPredicted RBP11.56□□□□□ -0.56
ZNF561-219ENST00000494276 HS3ST6Q96QI5 342 aa11.56□□□□□ -0.56
ZNF561-219ENST00000494276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.53□□□□□ -0.566e-6■□□□□ 8.9
ZNF561-219ENST00000494276 GSE1Q14687 1217 aa11.51□□□□□ -0.57
ZNF561-219ENST00000494276 FBXO3Q9UK99 471 aa11.48□□□□□ -0.57
ZNF561-219ENST00000494276 FKBP8Q14318 412 aa11.47□□□□□ -0.57
ZNF561-219ENST00000494276 G3V3G9 751 aa11.46□□□□□ -0.57
ZNF561-219ENST00000494276 PSEN1P49768 467 aa11.44□□□□□ -0.58
ZNF561-219ENST00000494276 KLHL34Q8N239 644 aa11.44□□□□□ -0.58
ZNF561-219ENST00000494276 CHRM1P11229 460 aaPredicted RBP11.41□□□□□ -0.58
ZNF561-219ENST00000494276 ZNF710Q8N1W2 664 aa11.41□□□□□ -0.58
ZNF561-219ENST00000494276 ERBB3P21860 1342 aa11.36□□□□□ -0.59
ZNF561-219ENST00000494276 BOLA1Q9Y3E2 137 aa11.36□□□□□ -0.59
ZNF561-219ENST00000494276 PDAP1Q13442 181 aaKnown RBP11.35□□□□□ -0.59
ZNF561-219ENST00000494276 DOK7Q18PE1 504 aa11.35□□□□□ -0.59
ZNF561-219ENST00000494276 ILDR1Q86SU0 546 aaPredicted RBP11.35□□□□□ -0.59
ZNF561-219ENST00000494276 HOXB3P14651 431 aaPredicted RBP11.34□□□□□ -0.59
ZNF561-219ENST00000494276 HOXB1P14653 301 aaPredicted RBP11.34□□□□□ -0.59
ZNF561-219ENST00000494276 DPY19L2Q6NUT2 758 aa11.34□□□□□ -0.59
ZNF561-219ENST00000494276 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
ZNF561-219ENST00000494276 RIMBP2O15034 1052 aa11.31□□□□□ -0.6
ZNF561-219ENST00000494276 CABP2Q9NPB3 220 aa11.3□□□□□ -0.6
ZNF561-219ENST00000494276 VASPP50552 380 aaPredicted RBP11.27□□□□□ -0.61
ZNF561-219ENST00000494276 MYT1LQ9UL68 1186 aa11.26□□□□□ -0.61
ZNF561-219ENST00000494276 VARS2Q5ST30 1063 aaKnown RBP11.23□□□□□ -0.61
ZNF561-219ENST00000494276 CIZ1Q9ULV3 898 aaPredicted RBP11.19□□□□□ -0.62
ZNF561-219ENST00000494276 PTGER2P43116 358 aa11.18□□□□□ -0.62
ZNF561-219ENST00000494276 ZSWIM6Q9HCJ5 1215 aa11.18□□□□□ -0.62
ZNF561-219ENST00000494276 ZNF687Q8N1G0 1237 aa11.16□□□□□ -0.62
ZNF561-219ENST00000494276 SPOCK2Q92563 424 aa11.13□□□□□ -0.63
ZNF561-219ENST00000494276 EFCAB3Q8N7B9 438 aa11.09□□□□□ -0.63
ZNF561-219ENST00000494276 GPR153Q6NV75 609 aa11.07□□□□□ -0.64
ZNF561-219ENST00000494276 ANKRD13DQ6ZTN6 518 aa11.07□□□□□ -0.64
ZNF561-219ENST00000494276 MICALL2Q8IY33 904 aa11.07□□□□□ -0.64
ZNF561-219ENST00000494276 TMEM92Q6UXU6 159 aa11.02□□□□□ -0.65
ZNF561-219ENST00000494276 TRIM41Q8WV44 630 aa11.02□□□□□ -0.65
ZNF561-219ENST00000494276 SOX12O15370 315 aa11□□□□□ -0.65
ZNF561-219ENST00000494276 ARSIQ5FYB1 569 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms