RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 GABBR2O75899 941 aa14.04□□□□□ -0.16
SMC2-205ENST00000493955 PAXIP1Q6ZW49 1069 aaPredicted RBP14.02□□□□□ -0.16
SMC2-205ENST00000493955 CHADLQ6NUI6 762 aa14.01□□□□□ -0.17
SMC2-205ENST00000493955 BCANQ96GW7 911 aa13.99□□□□□ -0.17
SMC2-205ENST00000493955 TRIM41Q8WV44 630 aa13.98□□□□□ -0.17
SMC2-205ENST00000493955 CFAP44Q96MT7 982 aa13.98□□□□□ -0.17
SMC2-205ENST00000493955 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
SMC2-205ENST00000493955 LHX8Q68G74 356 aa13.93□□□□□ -0.18
SMC2-205ENST00000493955 CHGAP10645 457 aaKnown RBP13.92□□□□□ -0.18
SMC2-205ENST00000493955 SPRYD3Q8NCJ5 442 aa13.92□□□□□ -0.18
SMC2-205ENST00000493955 GSE1Q14687 1217 aa13.89□□□□□ -0.19
SMC2-205ENST00000493955 KDM2AQ9Y2K7 1162 aa13.89□□□□□ -0.19
SMC2-205ENST00000493955 NUBP1P53384 320 aa13.82□□□□□ -0.2
SMC2-205ENST00000493955 HS6ST3Q8IZP7 471 aa13.82□□□□□ -0.2
SMC2-205ENST00000493955 RNF25Q96BH1 459 aaPredicted RBP13.79□□□□□ -0.2
SMC2-205ENST00000493955 TSHZ2Q9NRE2 1034 aa13.79□□□□□ -0.2
SMC2-205ENST00000493955 PLSCR2Q9NRY7 297 aa13.77□□□□□ -0.21
SMC2-205ENST00000493955 CD44P16070 742 aaKnown RBP13.76□□□□□ -0.21
SMC2-205ENST00000493955 DCAF8Q5TAQ9 597 aa13.76□□□□□ -0.21
SMC2-205ENST00000493955 CREBZFQ9NS37 354 aa13.74□□□□□ -0.21
SMC2-205ENST00000493955 TAOK2Q9UL54 1235 aa13.74□□□□□ -0.21
SMC2-205ENST00000493955 DNAJC5Q9H3Z4 198 aa13.73□□□□□ -0.21
SMC2-205ENST00000493955 FARP1Q9Y4F1 1045 aaPredicted RBP13.73□□□□□ -0.21
SMC2-205ENST00000493955 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
SMC2-205ENST00000493955 FAM212AQ96EL1 285 aa13.73□□□□□ -0.21
SMC2-205ENST00000493955 RIOK3O14730 519 aaKnown RBP13.72□□□□□ -0.21
SMC2-205ENST00000493955 MNX1P50219 401 aaPredicted RBP13.7□□□□□ -0.22
SMC2-205ENST00000493955 PRKCSHP14314 528 aaPredicted RBP13.65□□□□□ -0.22
SMC2-205ENST00000493955 VGFO15240 615 aaPredicted RBP13.61□□□□□ -0.23
SMC2-205ENST00000493955 CHRM1P11229 460 aaPredicted RBP13.61□□□□□ -0.23
SMC2-205ENST00000493955 RASEFQ8IZ41 740 aa13.61□□□□□ -0.23
SMC2-205ENST00000493955 CLCN6P51797 869 aa13.6□□□□□ -0.23
SMC2-205ENST00000493955 NKX1-1Q15270 411 aaPredicted RBP13.6□□□□□ -0.23
SMC2-205ENST00000493955 STK25O00506 426 aa13.59□□□□□ -0.23
SMC2-205ENST00000493955 DCBLD2Q96PD2 775 aa13.58□□□□□ -0.24
SMC2-205ENST00000493955 TPRNQ4KMQ1 711 aa13.55□□□□□ -0.24
SMC2-205ENST00000493955 GTPBP6O43824 516 aaPredicted RBP13.54□□□□□ -0.24
SMC2-205ENST00000493955 SGIP1Q9BQI5 828 aa13.53□□□□□ -0.24
SMC2-205ENST00000493955 ZRANB1Q9UGI0 708 aa13.53□□□□□ -0.24
SMC2-205ENST00000493955 ZNF579Q8NAF0 562 aaKnown RBP13.51□□□□□ -0.25
SMC2-205ENST00000493955 PYGBP11216 843 aa13.49□□□□□ -0.25
SMC2-205ENST00000493955 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.48□□□□□ -0.25
SMC2-205ENST00000493955 NBR1Q14596 966 aa13.48□□□□□ -0.25
SMC2-205ENST00000493955 ZFP91Q96JP5 570 aaPredicted RBP13.48□□□□□ -0.25
SMC2-205ENST00000493955 BCL11BQ9C0K0 894 aaPredicted RBP13.48□□□□□ -0.25
SMC2-205ENST00000493955 STK24Q9Y6E0 443 aa13.47□□□□□ -0.25
SMC2-205ENST00000493955 RYDENQ9NUL5 291 aaKnown RBP13.45□□□□□ -0.26
SMC2-205ENST00000493955 GALR2O43603 387 aaPredicted RBP13.41□□□□□ -0.26
SMC2-205ENST00000493955 ZNF467Q7Z7K2 595 aaPredicted RBP13.35□□□□□ -0.27
SMC2-205ENST00000493955 TSPYL2Q9H2G4 693 aaPredicted RBP13.33□□□□□ -0.28
SMC2-205ENST00000493955 PAK3O75914 559 aaPredicted RBP13.3□□□□□ -0.28
SMC2-205ENST00000493955 OTUD5Q96G74 571 aa13.3□□□□□ -0.28
SMC2-205ENST00000493955 PHF12Q96QT6 1004 aa13.3□□□□□ -0.28
SMC2-205ENST00000493955 POTEB2H3BUK9 544 aa13.28□□□□□ -0.28
SMC2-205ENST00000493955 PDAP1Q13442 181 aaKnown RBP13.27□□□□□ -0.29
SMC2-205ENST00000493955 PCDHB8Q9UN66 801 aa13.22□□□□□ -0.29
SMC2-205ENST00000493955 PCDHB13Q9Y5F0 798 aa13.22□□□□□ -0.29
SMC2-205ENST00000493955 CCDC61Q9Y6R9 512 aa13.22□□□□□ -0.29
SMC2-205ENST00000493955 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
SMC2-205ENST00000493955 PELP1Q8IZL8 1130 aaKnown RBP13.19□□□□□ -0.3
SMC2-205ENST00000493955 PSEN1P49768 467 aa13.16□□□□□ -0.3
SMC2-205ENST00000493955 POTEMA6NI47 508 aa13.14□□□□□ -0.31
SMC2-205ENST00000493955 CADPS2Q86UW7 1296 aa13.12□□□□□ -0.31
SMC2-205ENST00000493955 MFRPQ9BY79 579 aa13.12□□□□□ -0.31
SMC2-205ENST00000493955 WDR70Q9NW82 654 aa13.12□□□□□ -0.31
SMC2-205ENST00000493955 POTEGQ6S5H5 508 aa13.09□□□□□ -0.31
SMC2-205ENST00000493955 MS4A3Q96HJ5 214 aa13.09□□□□□ -0.31
SMC2-205ENST00000493955 IFNL1Q8IU54 200 aa13.07□□□□□ -0.32
SMC2-205ENST00000493955 METRNQ9UJH8 293 aa13.07□□□□□ -0.32
SMC2-205ENST00000493955 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
SMC2-205ENST00000493955 KCNV2Q8TDN2 545 aa13.06□□□□□ -0.32
SMC2-205ENST00000493955 ATMINO43313 823 aaPredicted RBP13.05□□□□□ -0.32
SMC2-205ENST00000493955 SLC39A7Q92504 469 aa13.05□□□□□ -0.32
SMC2-205ENST00000493955 MAP3K13O43283 966 aa13.03□□□□□ -0.32
SMC2-205ENST00000493955 KIF12Q96FN5 646 aa13.03□□□□□ -0.32
SMC2-205ENST00000493955 C7P10643 843 aa13.02□□□□□ -0.33
SMC2-205ENST00000493955 POTEJP0CG39 1038 aa13.01□□□□□ -0.33
SMC2-205ENST00000493955 NLRP6P59044 892 aa13.01□□□□□ -0.33
SMC2-205ENST00000493955 CABP2Q9NPB3 220 aa13.01□□□□□ -0.33
SMC2-205ENST00000493955 EFCAB3Q8N7B9 438 aa13□□□□□ -0.33
SMC2-205ENST00000493955 SOX12O15370 315 aa12.99□□□□□ -0.33
SMC2-205ENST00000493955 FBXO22Q8NEZ5 403 aa12.99□□□□□ -0.33
SMC2-205ENST00000493955 PPP1R37O75864 691 aa12.96□□□□□ -0.33
SMC2-205ENST00000493955 PHF8Q9UPP1 1060 aa12.96□□□□□ -0.34
SMC2-205ENST00000493955 MAMSTRQ6ZN01 415 aa12.95□□□□□ -0.34
SMC2-205ENST00000493955 ATN1P54259 1190 aaPredicted RBP12.92□□□□□ -0.34
SMC2-205ENST00000493955 LMOD2Q6P5Q4 547 aa12.9□□□□□ -0.34
SMC2-205ENST00000493955 ARHGEF1Q92888 912 aaKnown RBP12.9□□□□□ -0.34
SMC2-205ENST00000493955 PCDH10Q9P2E7 1040 aa12.9□□□□□ -0.34
SMC2-205ENST00000493955 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
SMC2-205ENST00000493955 E2F4Q16254 413 aa12.88□□□□□ -0.35
SMC2-205ENST00000493955 TULP1O00294 542 aaPredicted RBP12.88□□□□□ -0.35
SMC2-205ENST00000493955 FAM163AQ96GL9 167 aaPredicted RBP12.88□□□□□ -0.35
SMC2-205ENST00000493955 SCUBE2Q9NQ36 999 aa12.88□□□□□ -0.35
SMC2-205ENST00000493955 LCE2DQ5TA82 110 aaPredicted RBP12.85□□□□□ -0.35
SMC2-205ENST00000493955 BMP2KQ9NSY1 1161 aaPredicted RBP12.83□□□□□ -0.36
SMC2-205ENST00000493955 GOLGA2Q08379 1002 aa12.82□□□□□ -0.36
SMC2-205ENST00000493955 TRPC6Q9Y210 931 aa12.82□□□□□ -0.36
SMC2-205ENST00000493955 MS4A4AQ96JQ5 239 aa12.81□□□□□ -0.36
SMC2-205ENST00000493955 NCKAP5LQ9HCH0 1330 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms