RNA–Protein interactions for RNA: ENST00000493934.1

SLF1-205, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 3

Gene SLF1, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-205ENST00000493934 MMRN1Q13201 1228 aa7.91□□□□□ -1.14
SLF1-205ENST00000493934 SLC4A1APQ9BWU0 796 aaKnown RBP7.89□□□□□ -1.15
SLF1-205ENST00000493934 ATMINO43313 823 aaPredicted RBP7.88□□□□□ -1.15
SLF1-205ENST00000493934 SPNS2Q8IVW8 549 aa7.84□□□□□ -1.15
SLF1-205ENST00000493934 CREBZFQ9NS37 354 aa7.84□□□□□ -1.15
SLF1-205ENST00000493934 NPM1P06748 294 aaKnown RBP eCLIP7.83□□□□□ -1.16
SLF1-205ENST00000493934 MS4A3Q96HJ5 214 aa7.83□□□□□ -1.16
SLF1-205ENST00000493934 STAG3Q9UJ98 1225 aa7.81□□□□□ -1.16
SLF1-205ENST00000493934 ST18O60284 1047 aa7.75□□□□□ -1.17
SLF1-205ENST00000493934 ATN1P54259 1190 aaPredicted RBP7.75□□□□□ -1.17
SLF1-205ENST00000493934 SEC24BO95487 1268 aa7.74□□□□□ -1.17
SLF1-205ENST00000493934 TMEM121BQ9BXQ6 578 aaPredicted RBP7.71□□□□□ -1.18
SLF1-205ENST00000493934 SLAIN1Q8ND83 568 aa7.7□□□□□ -1.18
SLF1-205ENST00000493934 POTEFA5A3E0 1075 aa7.66□□□□□ -1.18
SLF1-205ENST00000493934 ZBTB22O15209 634 aa7.65□□□□□ -1.18
SLF1-205ENST00000493934 BMP2KQ9NSY1 1161 aaPredicted RBP7.64□□□□□ -1.19
SLF1-205ENST00000493934 SNPHO15079 494 aa7.62□□□□□ -1.19
SLF1-205ENST00000493934 TIE1P35590 1138 aa7.62□□□□□ -1.19
SLF1-205ENST00000493934 COLQQ9Y215 455 aaPredicted RBP7.59□□□□□ -1.19
SLF1-205ENST00000493934 IER5LQ5T953 404 aa7.58□□□□□ -1.2
SLF1-205ENST00000493934 TSPYL2Q9H2G4 693 aaPredicted RBP7.58□□□□□ -1.2
SLF1-205ENST00000493934 MARVELD3Q96A59 401 aa7.56□□□□□ -1.2
SLF1-205ENST00000493934 MNX1P50219 401 aaPredicted RBP7.54□□□□□ -1.2
SLF1-205ENST00000493934 CCDC61Q9Y6R9 512 aa7.54□□□□□ -1.2
SLF1-205ENST00000493934 EMP3P54852 163 aa7.53□□□□□ -1.2
SLF1-205ENST00000493934 KIF12Q96FN5 646 aa7.53□□□□□ -1.2
SLF1-205ENST00000493934 TTLL13PA6NNM8 815 aa7.52□□□□□ -1.21
SLF1-205ENST00000493934 PLCG2P16885 1265 aa7.5□□□□□ -1.21
SLF1-205ENST00000493934 TRIM35Q9UPQ4 493 aa7.5□□□□□ -1.21
SLF1-205ENST00000493934 TRPC6Q9Y210 931 aa7.49□□□□□ -1.21
SLF1-205ENST00000493934 MAP3K13O43283 966 aa7.46□□□□□ -1.22
SLF1-205ENST00000493934 RNF166Q96A37 237 aaPredicted RBP7.45□□□□□ -1.22
SLF1-205ENST00000493934 KRTAP3-3Q9BYR6 98 aa7.45□□□□□ -1.22
SLF1-205ENST00000493934 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
SLF1-205ENST00000493934 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.45□□□□□ -1.22
SLF1-205ENST00000493934 HS3ST6Q96QI5 342 aa7.44□□□□□ -1.22
SLF1-205ENST00000493934 FAM205CA6NFA0 338 aa7.41□□□□□ -1.22
SLF1-205ENST00000493934 SGIP1Q9BQI5 828 aa7.36□□□□□ -1.23
SLF1-205ENST00000493934 SPDYE4A6NLX3 237 aa7.35□□□□□ -1.23
SLF1-205ENST00000493934 PLEKHG5O94827 1062 aa7.35□□□□□ -1.23
SLF1-205ENST00000493934 PCDHB13Q9Y5F0 798 aa7.35□□□□□ -1.23
SLF1-205ENST00000493934 C3orf67Q6ZVT6 689 aa7.34□□□□□ -1.23
SLF1-205ENST00000493934 TMEM106CQ9BVX2 250 aa7.32□□□□□ -1.24
SLF1-205ENST00000493934 MYT1LQ9UL68 1186 aa7.32□□□□□ -1.24
SLF1-205ENST00000493934 IRX5P78411 483 aaPredicted RBP7.31□□□□□ -1.24
SLF1-205ENST00000493934 OCEL1Q9H607 264 aa7.31□□□□□ -1.24
SLF1-205ENST00000493934 POTEB3A0JP26 581 aa7.29□□□□□ -1.24
SLF1-205ENST00000493934 POTEBQ6S5H4 581 aa7.29□□□□□ -1.24
SLF1-205ENST00000493934 PTGER2P43116 358 aa7.26□□□□□ -1.25
SLF1-205ENST00000493934 RASEFQ8IZ41 740 aa7.24□□□□□ -1.25
SLF1-205ENST00000493934 IFNL1Q8IU54 200 aa7.22□□□□□ -1.25
SLF1-205ENST00000493934 ERBB3P21860 1342 aa7.21□□□□□ -1.26
SLF1-205ENST00000493934 L3MBTL3Q96JM7 780 aaPredicted RBP7.2□□□□□ -1.26
SLF1-205ENST00000493934 ZNF710Q8N1W2 664 aa7.18□□□□□ -1.26
SLF1-205ENST00000493934 PLA2G2EQ9NZK7 142 aa7.14□□□□□ -1.27
SLF1-205ENST00000493934 GOLGA2Q08379 1002 aa7.13□□□□□ -1.27
SLF1-205ENST00000493934 HOXB1P14653 301 aaPredicted RBP7.12□□□□□ -1.27
SLF1-205ENST00000493934 MIER1Q8N108 512 aa7.12□□□□□ -1.27
SLF1-205ENST00000493934 RIMBP2O15034 1052 aa7.11□□□□□ -1.27
SLF1-205ENST00000493934 DOK7Q18PE1 504 aa7.11□□□□□ -1.27
SLF1-205ENST00000493934 FAM212AQ96EL1 285 aa7.11□□□□□ -1.27
SLF1-205ENST00000493934 VARS2Q5ST30 1063 aaKnown RBP7.1□□□□□ -1.27
SLF1-205ENST00000493934 G3V3G9 751 aa7.09□□□□□ -1.27
SLF1-205ENST00000493934 DCAF8Q5TAQ9 597 aa7.09□□□□□ -1.27
SLF1-205ENST00000493934 ZBTB47Q9UFB7 747 aaPredicted RBP7.09□□□□□ -1.27
SLF1-205ENST00000493934 PDCD7Q8N8D1 485 aaKnown RBP7.08□□□□□ -1.28
SLF1-205ENST00000493934 MKRN3Q13064 507 aaKnown RBP7.07□□□□□ -1.28
SLF1-205ENST00000493934 HOXB3P14651 431 aaPredicted RBP7.04□□□□□ -1.28
SLF1-205ENST00000493934 ZNF687Q8N1G0 1237 aa7.04□□□□□ -1.28
SLF1-205ENST00000493934 PLCD3Q8N3E9 789 aa7.03□□□□□ -1.28
SLF1-205ENST00000493934 ANKRD13DQ6ZTN6 518 aa7.02□□□□□ -1.29
SLF1-205ENST00000493934 HCSTQ9UBK5 93 aa7.01□□□□□ -1.29
SLF1-205ENST00000493934 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7□□□□□ -1.29
SLF1-205ENST00000493934 IRX2Q9BZI1 471 aaPredicted RBP6.99□□□□□ -1.29
SLF1-205ENST00000493934 NUBP1P53384 320 aa6.97□□□□□ -1.29
SLF1-205ENST00000493934 PROM2Q8N271 834 aa6.96□□□□□ -1.3
SLF1-205ENST00000493934 ZSWIM6Q9HCJ5 1215 aa6.95□□□□□ -1.3
SLF1-205ENST00000493934 PCDHB8Q9UN66 801 aa6.94□□□□□ -1.3
SLF1-205ENST00000493934 PYGBP11216 843 aa6.93□□□□□ -1.3
SLF1-205ENST00000493934 LSM11P83369 360 aaKnown RBP eCLIP6.93□□□□□ -1.3
SLF1-205ENST00000493934 EHMT2Q96KQ7 1210 aa6.93□□□□□ -1.3
SLF1-205ENST00000493934 RGS20O76081 388 aa6.92□□□□□ -1.3
SLF1-205ENST00000493934 BOLA1Q9Y3E2 137 aa6.92□□□□□ -1.3
SLF1-205ENST00000493934 ZNF467Q7Z7K2 595 aaPredicted RBP6.9□□□□□ -1.3
SLF1-205ENST00000493934 PBX2P40425 430 aa6.85□□□□□ -1.31
SLF1-205ENST00000493934 DPY19L2Q6NUT2 758 aa6.81□□□□□ -1.32
SLF1-205ENST00000493934 Q6ZNB5 142 aa6.81□□□□□ -1.32
SLF1-205ENST00000493934 ILDR1Q86SU0 546 aaPredicted RBP6.81□□□□□ -1.32
SLF1-205ENST00000493934 GPR153Q6NV75 609 aa6.8□□□□□ -1.32
SLF1-205ENST00000493934 ZNF316A6NFI3 1004 aaPredicted RBP6.79□□□□□ -1.32
SLF1-205ENST00000493934 PSEN1P49768 467 aa6.79□□□□□ -1.32
SLF1-205ENST00000493934 ARSIQ5FYB1 569 aa6.74□□□□□ -1.33
SLF1-205ENST00000493934 CABP2Q9NPB3 220 aa6.73□□□□□ -1.33
SLF1-205ENST00000493934 PDAP1Q13442 181 aaKnown RBP6.72□□□□□ -1.33
SLF1-205ENST00000493934 ADGRD1Q6QNK2 874 aa6.71□□□□□ -1.34
SLF1-205ENST00000493934 STAC3Q96MF2 364 aa6.71□□□□□ -1.34
SLF1-205ENST00000493934 A0A0G2JS52 829 aa6.7□□□□□ -1.34
SLF1-205ENST00000493934 GSE1Q14687 1217 aa6.7□□□□□ -1.34
SLF1-205ENST00000493934 IFFO2Q5TF58 517 aa6.7□□□□□ -1.34
SLF1-205ENST00000493934 KCTD12Q96CX2 325 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms