RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 DCAF8Q5TAQ9 597 aa11.19□□□□□ -0.62
CD46-217ENST00000493796 CCDC61Q9Y6R9 512 aa11.18□□□□□ -0.62
CD46-217ENST00000493796 GSE1Q14687 1217 aa11.16□□□□□ -0.62
CD46-217ENST00000493796 PHF12Q96QT6 1004 aa11.14□□□□□ -0.63
CD46-217ENST00000493796 CIZ1Q9ULV3 898 aaPredicted RBP11.12□□□□□ -0.63
CD46-217ENST00000493796 CLCN6P51797 869 aa11.09□□□□□ -0.63
CD46-217ENST00000493796 GABBR2O75899 941 aa11.08□□□□□ -0.64
CD46-217ENST00000493796 KIF12Q96FN5 646 aa11.08□□□□□ -0.64
CD46-217ENST00000493796 PYGBP11216 843 aa11.06□□□□□ -0.64
CD46-217ENST00000493796 MAP3K13O43283 966 aa11.03□□□□□ -0.64
CD46-217ENST00000493796 CHRM1P11229 460 aaPredicted RBP11.03□□□□□ -0.64
CD46-217ENST00000493796 TRIM41Q8WV44 630 aa11.03□□□□□ -0.64
CD46-217ENST00000493796 GALR2O43603 387 aaPredicted RBP11.02□□□□□ -0.65
CD46-217ENST00000493796 MS4A3Q96HJ5 214 aa11.01□□□□□ -0.65
CD46-217ENST00000493796 SGIP1Q9BQI5 828 aa11.01□□□□□ -0.65
CD46-217ENST00000493796 PKD2Q13563 968 aa11□□□□□ -0.65
CD46-217ENST00000493796 PCDHB13Q9Y5F0 798 aa10.99□□□□□ -0.65
CD46-217ENST00000493796 IFNL1Q8IU54 200 aa10.96□□□□□ -0.65
CD46-217ENST00000493796 ECM2O94769 699 aaPredicted RBP10.94□□□□□ -0.66
CD46-217ENST00000493796 ZNF467Q7Z7K2 595 aaPredicted RBP10.92□□□□□ -0.66
CD46-217ENST00000493796 PCDHB8Q9UN66 801 aa10.92□□□□□ -0.66
CD46-217ENST00000493796 TRPC6Q9Y210 931 aa10.91□□□□□ -0.66
CD46-217ENST00000493796 AMER1Q5JTC6 1135 aaPredicted RBP10.88□□□□□ -0.67
CD46-217ENST00000493796 RNF25Q96BH1 459 aaPredicted RBP10.88□□□□□ -0.67
CD46-217ENST00000493796 DCBLD2Q96PD2 775 aa10.88□□□□□ -0.67
CD46-217ENST00000493796 TIE1P35590 1138 aa10.86□□□□□ -0.67
CD46-217ENST00000493796 RIOK3O14730 519 aaKnown RBP10.85□□□□□ -0.67
CD46-217ENST00000493796 POTEIP0CG38 1075 aa10.85□□□□□ -0.67
CD46-217ENST00000493796 RGL2O15211 777 aa10.84□□□□□ -0.67
CD46-217ENST00000493796 RTN4Q9NQC3 1192 aaKnown RBP10.84□□□□□ -0.67
CD46-217ENST00000493796 BMP2KQ9NSY1 1161 aaPredicted RBP10.84□□□□□ -0.67
CD46-217ENST00000493796 ASTLQ6HA08 431 aaPredicted RBP10.83□□□□□ -0.68
CD46-217ENST00000493796 ATMINO43313 823 aaPredicted RBP10.82□□□□□ -0.68
CD46-217ENST00000493796 PDAP1Q13442 181 aaKnown RBP10.82□□□□□ -0.68
CD46-217ENST00000493796 TTLL13PA6NNM8 815 aa10.81□□□□□ -0.68
CD46-217ENST00000493796 PSEN1P49768 467 aa10.81□□□□□ -0.68
CD46-217ENST00000493796 TMEM106CQ9BVX2 250 aa10.8□□□□□ -0.68
CD46-217ENST00000493796 VGFO15240 615 aaPredicted RBP10.79□□□□□ -0.68
CD46-217ENST00000493796 ATN1P54259 1190 aaPredicted RBP10.79□□□□□ -0.68
CD46-217ENST00000493796 PELP1Q8IZL8 1130 aaKnown RBP10.76□□□□□ -0.69
CD46-217ENST00000493796 TAOK2Q9UL54 1235 aa10.76□□□□□ -0.69
CD46-217ENST00000493796 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.74□□□□□ -0.69
CD46-217ENST00000493796 ZFP91Q96JP5 570 aaPredicted RBP10.74□□□□□ -0.69
CD46-217ENST00000493796 TRIM35Q9UPQ4 493 aa10.74□□□□□ -0.69
CD46-217ENST00000493796 SLC39A7Q92504 469 aa10.69□□□□□ -0.7
CD46-217ENST00000493796 CABP2Q9NPB3 220 aa10.67□□□□□ -0.7
CD46-217ENST00000493796 STK25O00506 426 aa10.66□□□□□ -0.7
CD46-217ENST00000493796 C7P10643 843 aa10.66□□□□□ -0.7
CD46-217ENST00000493796 GOLGA2Q08379 1002 aa10.66□□□□□ -0.7
CD46-217ENST00000493796 IER5LQ5T953 404 aa10.66□□□□□ -0.7
CD46-217ENST00000493796 BCL11BQ9C0K0 894 aaPredicted RBP10.66□□□□□ -0.7
CD46-217ENST00000493796 METRNQ9UJH8 293 aa10.65□□□□□ -0.7
CD46-217ENST00000493796 STK24Q9Y6E0 443 aa10.64□□□□□ -0.71
CD46-217ENST00000493796 DCAF8L2P0C7V8 631 aa10.63□□□□□ -0.71
CD46-217ENST00000493796 MKRN3Q13064 507 aaKnown RBP10.62□□□□□ -0.71
CD46-217ENST00000493796 HS6ST3Q8IZP7 471 aa10.62□□□□□ -0.71
CD46-217ENST00000493796 CHGAP10645 457 aaKnown RBP10.61□□□□□ -0.71
CD46-217ENST00000493796 EFCAB3Q8N7B9 438 aa10.6□□□□□ -0.71
CD46-217ENST00000493796 POTEFA5A3E0 1075 aa10.59□□□□□ -0.71
CD46-217ENST00000493796 IRX5P78411 483 aaPredicted RBP10.59□□□□□ -0.71
CD46-217ENST00000493796 COLQQ9Y215 455 aaPredicted RBP10.58□□□□□ -0.72
CD46-217ENST00000493796 SEC24BO95487 1268 aa10.57□□□□□ -0.72
CD46-217ENST00000493796 OCEL1Q9H607 264 aa10.56□□□□□ -0.72
CD46-217ENST00000493796 SOX12O15370 315 aa10.55□□□□□ -0.72
CD46-217ENST00000493796 PLCG2P16885 1265 aa10.55□□□□□ -0.72
CD46-217ENST00000493796 ILDR1Q86SU0 546 aaPredicted RBP10.55□□□□□ -0.72
CD46-217ENST00000493796 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.55□□□□□ -0.724e-12■■□□□ 12.5
CD46-217ENST00000493796 DNAJC5Q9H3Z4 198 aa10.53□□□□□ -0.72
CD46-217ENST00000493796 LHX8Q68G74 356 aa10.52□□□□□ -0.73
CD46-217ENST00000493796 PDCD7Q8N8D1 485 aaKnown RBP10.52□□□□□ -0.73
CD46-217ENST00000493796 POTEB2H3BUK9 544 aa10.51□□□□□ -0.73
CD46-217ENST00000493796 PHF8Q9UPP1 1060 aa10.5□□□□□ -0.73
CD46-217ENST00000493796 MFRPQ9BY79 579 aa10.49□□□□□ -0.73
CD46-217ENST00000493796 NLRP6P59044 892 aa10.48□□□□□ -0.73
CD46-217ENST00000493796 NKX1-1Q15270 411 aaPredicted RBP10.47□□□□□ -0.73
CD46-217ENST00000493796 FBXO22Q8NEZ5 403 aa10.47□□□□□ -0.73
CD46-217ENST00000493796 POTEJP0CG39 1038 aa10.46□□□□□ -0.73
CD46-217ENST00000493796 MS4A4AQ96JQ5 239 aa10.46□□□□□ -0.73
CD46-217ENST00000493796 DPY19L2Q6NUT2 758 aa10.45□□□□□ -0.74
CD46-217ENST00000493796 BBXQ8WY36 941 aaPredicted RBP10.42□□□□□ -0.74
CD46-217ENST00000493796 L3MBTL3Q96JM7 780 aaPredicted RBP10.42□□□□□ -0.74
CD46-217ENST00000493796 MAMSTRQ6ZN01 415 aa10.38□□□□□ -0.75
CD46-217ENST00000493796 BOLA1Q9Y3E2 137 aa10.38□□□□□ -0.75
CD46-217ENST00000493796 RYDENQ9NUL5 291 aaKnown RBP10.37□□□□□ -0.75
CD46-217ENST00000493796 GTPBP6O43824 516 aaPredicted RBP10.36□□□□□ -0.75
CD46-217ENST00000493796 OTUD5Q96G74 571 aa10.36□□□□□ -0.75
CD46-217ENST00000493796 G3V3G9 751 aa10.35□□□□□ -0.75
CD46-217ENST00000493796 SCUBE2Q9NQ36 999 aa10.35□□□□□ -0.75
CD46-217ENST00000493796 PPP1R37O75864 691 aa10.34□□□□□ -0.75
CD46-217ENST00000493796 TMEM121BQ9BXQ6 578 aaPredicted RBP10.34□□□□□ -0.75
CD46-217ENST00000493796 MICALL2Q8IY33 904 aa10.33□□□□□ -0.76
CD46-217ENST00000493796 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.33□□□□□ -0.76
CD46-217ENST00000493796 C3orf67Q6ZVT6 689 aa10.31□□□□□ -0.76
CD46-217ENST00000493796 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.3□□□□□ -0.76
CD46-217ENST00000493796 SPRYD3Q8NCJ5 442 aa10.27□□□□□ -0.77
CD46-217ENST00000493796 PAXIP1Q6ZW49 1069 aaPredicted RBP10.25□□□□□ -0.77
CD46-217ENST00000493796 SLAIN1Q8ND83 568 aa10.25□□□□□ -0.77
CD46-217ENST00000493796 CFAP44Q96MT7 982 aa10.23□□□□□ -0.77
CD46-217ENST00000493796 TMEM92Q6UXU6 159 aa10.21□□□□□ -0.77
CD46-217ENST00000493796 KIF3CO14782 793 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms