RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 CLCN6P51797 869 aa16.32■□□□□ 0.2
LRCH3-218ENST00000493726 ZBTB47Q9UFB7 747 aaPredicted RBP16.32■□□□□ 0.2
LRCH3-218ENST00000493726 POTEIP0CG38 1075 aa16.31■□□□□ 0.2
LRCH3-218ENST00000493726 CCDC61Q9Y6R9 512 aa16.3■□□□□ 0.2
LRCH3-218ENST00000493726 NUBP1P53384 320 aa16.29■□□□□ 0.2
LRCH3-218ENST00000493726 DCBLD2Q96PD2 775 aa16.24■□□□□ 0.19
LRCH3-218ENST00000493726 MS4A3Q96HJ5 214 aa16.23■□□□□ 0.19
LRCH3-218ENST00000493726 KLHL34Q8N239 644 aa16.21■□□□□ 0.19
LRCH3-218ENST00000493726 KIF12Q96FN5 646 aa16.17■□□□□ 0.18
LRCH3-218ENST00000493726 FAM212AQ96EL1 285 aa16.14■□□□□ 0.17
LRCH3-218ENST00000493726 MAP3K13O43283 966 aa16.13■□□□□ 0.17
LRCH3-218ENST00000493726 IFNLR1Q8IU57 520 aaPredicted RBP16.11■□□□□ 0.17
LRCH3-218ENST00000493726 DCAF8Q5TAQ9 597 aa16.1■□□□□ 0.17
LRCH3-218ENST00000493726 TRPC6Q9Y210 931 aa16.06■□□□□ 0.16
LRCH3-218ENST00000493726 PELP1Q8IZL8 1130 aaKnown RBP16.02■□□□□ 0.16
LRCH3-218ENST00000493726 PYGBP11216 843 aa16■□□□□ 0.15
LRCH3-218ENST00000493726 PCDHB13Q9Y5F0 798 aa16■□□□□ 0.15
LRCH3-218ENST00000493726 ATMINO43313 823 aaPredicted RBP15.98■□□□□ 0.15
LRCH3-218ENST00000493726 LHX8Q68G74 356 aa15.98■□□□□ 0.15
LRCH3-218ENST00000493726 RB1CC1Q8TDY2 1594 aa15.98■□□□□ 0.15
LRCH3-218ENST00000493726 NACADO15069 1562 aa15.97■□□□□ 0.15
LRCH3-218ENST00000493726 ASTLQ6HA08 431 aaPredicted RBP15.97■□□□□ 0.15
LRCH3-218ENST00000493726 MYO15BQ96JP2 1530 aa15.95■□□□□ 0.14
LRCH3-218ENST00000493726 SPOCK2Q92563 424 aa15.95■□□□□ 0.14
LRCH3-218ENST00000493726 IFNL1Q8IU54 200 aa15.94■□□□□ 0.14
LRCH3-218ENST00000493726 BMP2KQ9NSY1 1161 aaPredicted RBP15.94■□□□□ 0.14
LRCH3-218ENST00000493726 ATN1P54259 1190 aaPredicted RBP15.93■□□□□ 0.14
LRCH3-218ENST00000493726 GSE1Q14687 1217 aa15.91■□□□□ 0.14
LRCH3-218ENST00000493726 SGIP1Q9BQI5 828 aa15.9■□□□□ 0.14
LRCH3-218ENST00000493726 CIZ1Q9ULV3 898 aaPredicted RBP15.87■□□□□ 0.13
LRCH3-218ENST00000493726 TIE1P35590 1138 aa15.86■□□□□ 0.13
LRCH3-218ENST00000493726 TTLL13PA6NNM8 815 aa15.84■□□□□ 0.13
LRCH3-218ENST00000493726 PCDHB8Q9UN66 801 aa15.84■□□□□ 0.13
LRCH3-218ENST00000493726 METRNQ9UJH8 293 aa15.83■□□□□ 0.12
LRCH3-218ENST00000493726 POTEB2H3BUK9 544 aa15.81■□□□□ 0.12
LRCH3-218ENST00000493726 SLC39A7Q92504 469 aa15.8■□□□□ 0.12
LRCH3-218ENST00000493726 DCAF1Q9Y4B6 1507 aa15.79■□□□□ 0.12
LRCH3-218ENST00000493726 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
LRCH3-218ENST00000493726 TMEM106CQ9BVX2 250 aa15.77■□□□□ 0.12
LRCH3-218ENST00000493726 C7P10643 843 aa15.76■□□□□ 0.11
LRCH3-218ENST00000493726 TRIM35Q9UPQ4 493 aa15.75■□□□□ 0.11
LRCH3-218ENST00000493726 CHRM1P11229 460 aaPredicted RBP15.71■□□□□ 0.11
LRCH3-218ENST00000493726 POTEFA5A3E0 1075 aa15.69■□□□□ 0.1
LRCH3-218ENST00000493726 ZNF467Q7Z7K2 595 aaPredicted RBP15.67■□□□□ 0.1
LRCH3-218ENST00000493726 UNC13AQ9UPW8 1703 aa15.64■□□□□ 0.09
LRCH3-218ENST00000493726 COLQQ9Y215 455 aaPredicted RBP15.64■□□□□ 0.09
LRCH3-218ENST00000493726 POTEJP0CG39 1038 aa15.63■□□□□ 0.09
LRCH3-218ENST00000493726 OTUD5Q96G74 571 aa15.62■□□□□ 0.09
LRCH3-218ENST00000493726 SEC24BO95487 1268 aa15.61■□□□□ 0.09
LRCH3-218ENST00000493726 PSEN1P49768 467 aa15.58■□□□□ 0.08
LRCH3-218ENST00000493726 BICRAQ9NZM4 1560 aa15.58■□□□□ 0.08
LRCH3-218ENST00000493726 IER5LQ5T953 404 aa15.57■□□□□ 0.08
LRCH3-218ENST00000493726 DCAF8L2P0C7V8 631 aa15.56■□□□□ 0.08
LRCH3-218ENST00000493726 PDAP1Q13442 181 aaKnown RBP15.51■□□□□ 0.07
LRCH3-218ENST00000493726 TRIM41Q8WV44 630 aa15.51■□□□□ 0.07
LRCH3-218ENST00000493726 IRX5P78411 483 aaPredicted RBP15.49■□□□□ 0.07
LRCH3-218ENST00000493726 PLCG2P16885 1265 aa15.48■□□□□ 0.07
LRCH3-218ENST00000493726 SHROOM4Q9ULL8 1493 aa15.47■□□□□ 0.07
LRCH3-218ENST00000493726 GOLGA2Q08379 1002 aa15.46■□□□□ 0.07
LRCH3-218ENST00000493726 RNF25Q96BH1 459 aaPredicted RBP15.46■□□□□ 0.07
LRCH3-218ENST00000493726 MKRN3Q13064 507 aaKnown RBP15.42■□□□□ 0.06
LRCH3-218ENST00000493726 MAMSTRQ6ZN01 415 aa15.42■□□□□ 0.06
LRCH3-218ENST00000493726 CABP2Q9NPB3 220 aa15.42■□□□□ 0.06
LRCH3-218ENST00000493726 OCEL1Q9H607 264 aa15.41■□□□□ 0.06
LRCH3-218ENST00000493726 SCUBE2Q9NQ36 999 aa15.4■□□□□ 0.06
LRCH3-218ENST00000493726 RIOK3O14730 519 aaKnown RBP15.39■□□□□ 0.05
LRCH3-218ENST00000493726 ECM2O94769 699 aaPredicted RBP15.35■□□□□ 0.05
LRCH3-218ENST00000493726 PKD2Q13563 968 aa15.35■□□□□ 0.05
LRCH3-218ENST00000493726 PDCD7Q8N8D1 485 aaKnown RBP15.34■□□□□ 0.05
LRCH3-218ENST00000493726 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.34■□□□□ 0.054e-11■□□□□ 10.8
LRCH3-218ENST00000493726 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.32■□□□□ 0.04
LRCH3-218ENST00000493726 ZFP91Q96JP5 570 aaPredicted RBP15.32■□□□□ 0.04
LRCH3-218ENST00000493726 SCRIBQ14160 1630 aa15.31■□□□□ 0.04
LRCH3-218ENST00000493726 VGFO15240 615 aaPredicted RBP15.29■□□□□ 0.04
LRCH3-218ENST00000493726 EFCAB3Q8N7B9 438 aa15.28■□□□□ 0.04
LRCH3-218ENST00000493726 RGL2O15211 777 aa15.25■□□□□ 0.03
LRCH3-218ENST00000493726 DPY19L2Q6NUT2 758 aa15.25■□□□□ 0.03
LRCH3-218ENST00000493726 SLAIN1Q8ND83 568 aa15.22■□□□□ 0.03
LRCH3-218ENST00000493726 ILDR1Q86SU0 546 aaPredicted RBP15.21■□□□□ 0.03
LRCH3-218ENST00000493726 BCL11BQ9C0K0 894 aaPredicted RBP15.18■□□□□ 0.02
LRCH3-218ENST00000493726 L3MBTL3Q96JM7 780 aaPredicted RBP15.15■□□□□ 0.02
LRCH3-218ENST00000493726 STK24Q9Y6E0 443 aa15.15■□□□□ 0.02
LRCH3-218ENST00000493726 FAM163AQ96GL9 167 aaPredicted RBP15.14■□□□□ 0.01
LRCH3-218ENST00000493726 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.14■□□□□ 0.01
LRCH3-218ENST00000493726 EIF4G1Q04637 1599 aaKnown RBP15.12■□□□□ 0.01
LRCH3-218ENST00000493726 STK25O00506 426 aa15.12■□□□□ 0.01
LRCH3-218ENST00000493726 TAOK2Q9UL54 1235 aa15.12■□□□□ 0.01
LRCH3-218ENST00000493726 C3orf67Q6ZVT6 689 aa15.11■□□□□ 0.01
LRCH3-218ENST00000493726 PHF8Q9UPP1 1060 aa15.11■□□□□ 0.01
LRCH3-218ENST00000493726 LCE2DQ5TA82 110 aaPredicted RBP15.1■□□□□ 0.01
LRCH3-218ENST00000493726 BOLA1Q9Y3E2 137 aa15.08■□□□□ 0
LRCH3-218ENST00000493726 SOX12O15370 315 aa15.07■□□□□ 0
LRCH3-218ENST00000493726 CC2D2AQ9P2K1 1620 aa15.06■□□□□ 0
LRCH3-218ENST00000493726 MS4A4AQ96JQ5 239 aa15.06■□□□□ 0
LRCH3-218ENST00000493726 G3V3G9 751 aa15.05■□□□□ -0
LRCH3-218ENST00000493726 POTEMA6NI47 508 aa15.04■□□□□ -0
LRCH3-218ENST00000493726 POTEGQ6S5H5 508 aa15.02■□□□□ -0
LRCH3-218ENST00000493726 MFRPQ9BY79 579 aa14.98□□□□□ -0.01
LRCH3-218ENST00000493726 FBXO22Q8NEZ5 403 aa14.97□□□□□ -0.01
LRCH3-218ENST00000493726 CECR2Q9BXF3 1484 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms